FFCP PHASE1:Hg19::chr1:89829517..89829537,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=163351 | |EntrezGene=163351 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25395 | |HGNC=25395 | ||
|TSSclassifier=strong | |||
|UniProt=B4E1U2 | |UniProt=B4E1U2 | ||
|association_with_transcript=-67bp_to_ENST00000544311_5end | |||
|cluster_id=chr1:89829517..89829537,+ | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_3_at_GBP6_5end | |||
|id=chr1:89829517..89829537,+ | |||
|ontology_enrichment_celltype=CL:0002076!6.66e-21!43;CL:0002251!1.46e-14!21;CL:0000223!3.18e-14!59;CL:0002166!2.13e-13!3;CL:0002621!4.34e-13!3;CL:0002368!6.39e-11!13;CL:0000066!3.62e-10!254;CL:0002159!4.75e-08!13;CL:0000076!3.36e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000575;2.85e-10;2!CL:0002166;2.88e-07;3!CL:0000307;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,3.58e-10,2;CL:0000068,2.97e-07,3;CL:0000069,2.97e-07,3;CL:0000307,2.97e-07,3;CL:0000377,2.97e-07,3;CL:0002166,3.16e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;8.94e-20;1!UBERON:0008814;1.57e-10;2!UBERON:0010056;1.57e-10;2!CL:0000377;2.88e-07;3 | |||
|ontology_enrichment_disease=DOID:1749!1.65e-22!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.44e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.95e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0003729!5.55e-21!5;UBERON:0000974!1.26e-19!10;UBERON:0000166!1.65e-18!21;UBERON:0000161!2.53e-17!35;UBERON:0003343!3.35e-17!4;UBERON:0004785!3.35e-17!4;UBERON:0000344!2.82e-16!12;UBERON:0000165!3.23e-16!28;UBERON:0000930!3.23e-16!28;UBERON:0001004!1.46e-14!72;UBERON:0001723!1.40e-13!3;UBERON:0001033!1.40e-13!3;UBERON:0010056!1.40e-13!3;UBERON:0001949!4.34e-13!3;UBERON:0001042!1.96e-10!10;UBERON:0009145!1.96e-10!10;UBERON:0004119!2.59e-10!169;UBERON:0000925!2.59e-10!169;UBERON:0006595!2.59e-10!169;UBERON:0001444!2.86e-10!48;UBERON:0001708!3.67e-10!4;UBERON:0001704!3.67e-10!4;UBERON:0000341!1.29e-09!2;UBERON:0006562!1.86e-09!11;UBERON:0000065!7.93e-09!53;UBERON:0003102!9.06e-09!95;UBERON:0001255!1.35e-08!2;UBERON:0001556!1.35e-08!2;UBERON:0001007!1.05e-07!155;UBERON:0001555!1.05e-07!155;UBERON:0007026!1.05e-07!155;UBERON:0002090!6.61e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000974;1.54e-27;6!UBERON:0001723;4.58e-25;3!UBERON:0001033;4.58e-25;3!UBERON:0002372;1.42e-19;1!UBERON:0001961;1.42e-19;1!UBERON:0001744;1.42e-19;1!UBERON:0001042;1.42e-19;1!UBERON:0001735;1.42e-19;1!UBERON:0000997;1.88e-19;1!UBERON:0005056;1.88e-19;1!UBERON:0004176;1.88e-19;1!UBERON:0003343;8.11e-19;4!UBERON:0004785;8.11e-19;4!UBERON:0000165;3.43e-16;28!UBERON:0000341;1.80e-10;2!UBERON:0006562;1.80e-10;2!UBERON:0007811;2.29e-09;52!UBERON:0000161;3.67e-09;19!UBERON:0000166;3.67e-09;19!UBERON:0000344;9.87e-09;20!UBERON:0000153;1.26e-08;54!UBERON:0000033;2.70e-08;50!UBERON:0000020;1.11e-07;23!UBERON:0001444;1.19e-07;48!UBERON:0001043;1.82e-07;3!UBERON:0001032;2.20e-07;24!UBERON:0004456;2.20e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,4.31e-25,3;UBERON:0001033,4.31e-25,3;UBERON:0010056,4.31e-25,3;UBERON:0000166,1.20e-20,22;UBERON:0002372,1.30e-19,1;UBERON:0001961,1.30e-19,1;UBERON:0001744,1.30e-19,1;UBERON:0001735,1.30e-19,1;UBERON:0000997,1.88e-19,1;UBERON:0005056,1.88e-19,1;UBERON:0003343,5.64e-19,4;UBERON:0004785,5.64e-19,4;UBERON:0000153,3.96e-18,62;UBERON:0007811,3.96e-18,62;UBERON:0001042,5.26e-17,10;UBERON:0009145,5.26e-17,10;UBERON:0000974,6.54e-17,10;UBERON:0000165,1.05e-15,29;UBERON:0000930,1.05e-15,29;UBERON:0006562,1.60e-15,11;UBERON:0000033,1.98e-15,56;UBERON:0001444,3.98e-13,49;UBERON:0000161,1.12e-12,36;UBERON:0000341,1.89e-10,2;UBERON:0008814,1.21e-09,18;UBERON:0001557,2.98e-09,19;UBERON:0000344,8.75e-09,20;UBERON:0001004,1.19e-08,74;UBERON:0003102,1.39e-08,99;UBERON:0001043,1.82e-07,3;UBERON:0009143,1.82e-07,3;UBERON:0000020,2.30e-07,24;UBERON:0001032,2.30e-07,24;UBERON:0004456,2.30e-07,24 | |||
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| ||
|short_description=p3@GBP6 | |||
}} | }} |
Latest revision as of 17:16, 19 September 2015
Short description: | p3@GBP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GBP6_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | -67bp_to_ENST00000544311_5end |
EntrezGene: | GBP6 |
HGNC: | 25395 |
UniProt: | B4E1U2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 3.58e-10 | 2 |
duct epithelial cell | 2.97e-07 | 3 |
branched duct epithelial cell | 2.97e-07 | 3 |
tracheal epithelial cell | 2.97e-07 | 3 |
tracheoblast | 2.97e-07 | 3 |
epithelial cell of Malassez | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
tongue | 4.31e-25 | 3 |
gustatory system | 4.31e-25 | 3 |
future tongue | 4.31e-25 | 3 |
oral opening | 1.20e-20 | 22 |
tonsil | 1.30e-19 | 1 |
mucosa-associated lymphoid tissue | 1.30e-19 | 1 |
lymphoid tissue | 1.30e-19 | 1 |
tonsillar ring | 1.30e-19 | 1 |
mammalian vulva | 1.88e-19 | 1 |
external female genitalia | 1.88e-19 | 1 |
mucosa of oral region | 5.64e-19 | 4 |
respiratory system mucosa | 5.64e-19 | 4 |
anterior region of body | 3.96e-18 | 62 |
craniocervical region | 3.96e-18 | 62 |
chordate pharynx | 5.26e-17 | 10 |
pharyngeal region of foregut | 5.26e-17 | 10 |
neck | 6.54e-17 | 10 |
mouth | 1.05e-15 | 29 |
stomodeum | 1.05e-15 | 29 |
pharynx | 1.60e-15 | 11 |
head | 1.98e-15 | 56 |
subdivision of head | 3.98e-13 | 49 |
orifice | 1.12e-12 | 36 |
throat | 1.89e-10 | 2 |
pharyngeal arch system | 1.21e-09 | 18 |
upper respiratory tract | 2.98e-09 | 19 |
mucosa | 8.75e-09 | 20 |
respiratory system | 1.19e-08 | 74 |
surface structure | 1.39e-08 | 99 |
esophagus | 1.82e-07 | 3 |
esophageal region | 1.82e-07 | 3 |
sense organ | 2.30e-07 | 24 |
sensory system | 2.30e-07 | 24 |
entire sense organ system | 2.30e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.95e-12 | 14 |