FFCP PHASE1:Hg19::chr21:45705752..45705767,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=326 | |EntrezGene=326 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=360 | |HGNC=360 | ||
|TSSclassifier=strong | |||
|UniProt=O43918 | |UniProt=O43918 | ||
|association_with_transcript=0bp_to_ENST00000291582,NM_000383,uc002zei.2_5end | |||
|cluster_id=chr21:45705752..45705767,+ | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_1_at_AIRE_5end | |||
|id=chr21:45705752..45705767,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.58e-07!7;CL:0000586!2.58e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;8.84e-42;7!CL:0000586;8.84e-42;7!CL:0002178;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.21e-41,7;CL:0000586,1.21e-41,7;CL:0002178,2.97e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.04e-29;10!UBERON:0005564;2.04e-29;10!UBERON:0005425;3.25e-19;1!UBERON:0006965;2.72e-10;2!UBERON:0006603;2.83e-08;65!UBERON:0003056;2.79e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;1.30e-13;22!DOID:2994;1.30e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.44e-13,22;DOID:2994,1.44e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.16e-37!57;UBERON:0005068!3.16e-37!57;UBERON:0006241!3.16e-37!57;UBERON:0007135!3.16e-37!57;UBERON:0002616!1.14e-30!59;UBERON:0002780!1.41e-25!41;UBERON:0001890!1.41e-25!41;UBERON:0006240!1.41e-25!41;UBERON:0003075!2.81e-25!86;UBERON:0007284!2.81e-25!86;UBERON:0003080!7.68e-25!42;UBERON:0001017!1.12e-24!82;UBERON:0000955!1.17e-24!69;UBERON:0006238!1.17e-24!69;UBERON:0007023!4.51e-24!115;UBERON:0002346!9.09e-24!90;UBERON:0002020!2.88e-23!34;UBERON:0003528!2.88e-23!34;UBERON:0005743!3.72e-23!86;UBERON:0001893!6.40e-23!34;UBERON:0001869!6.56e-22!32;UBERON:0000073!7.00e-22!94;UBERON:0001016!7.00e-22!94;UBERON:0002791!3.55e-21!33;UBERON:0002619!5.63e-20!22;UBERON:0001950!3.32e-19!20;UBERON:0000956!2.91e-17!25;UBERON:0000203!2.91e-17!25;UBERON:0003056!4.79e-17!61;UBERON:0000153!2.75e-16!129;UBERON:0007811!2.75e-16!129;UBERON:0000033!7.15e-15!123;UBERON:0003076!1.36e-13!15;UBERON:0003057!1.36e-13!15;UBERON:0004732!7.93e-13!13;UBERON:0002298!1.99e-12!8;UBERON:0004121!4.57e-11!169;UBERON:0004733!1.22e-10!12;UBERON:0002028!1.22e-10!12;UBERON:0007277!1.22e-10!12;UBERON:0000924!1.29e-10!173;UBERON:0006601!1.29e-10!173;UBERON:0000988!1.57e-09!3;UBERON:0001896!5.20e-09!3;UBERON:0005290!5.20e-09!3;UBERON:0010096!5.20e-09!3;UBERON:0001872!5.40e-09!5;UBERON:0001871!8.08e-09!7;UBERON:0000349!8.59e-09!5;UBERON:0000025!8.65e-09!194;UBERON:0002308!1.88e-07!9;UBERON:0000125!1.88e-07!9;UBERON:0002420!2.04e-07!9;UBERON:0007245!2.04e-07!9;UBERON:0010009!2.04e-07!9;UBERON:0010011!2.04e-07!9;UBERON:0000454!2.04e-07!9;UBERON:0000200!2.39e-07!6;UBERON:0000477!2.99e-07!286;UBERON:0000481!3.73e-07!347;UBERON:0004111!3.99e-07!241;UBERON:0002148!6.28e-07!2;UBERON:0009662!6.28e-07!2;UBERON:0001876!7.46e-07!2;UBERON:0005162!9.36e-07!2;UBERON:0000122!9.36e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.68e-37;2!UBERON:0005058;5.68e-37;2!UBERON:0009113;5.68e-37;2!UBERON:0000473;1.24e-36;8!UBERON:0003135;8.64e-27;11!UBERON:0000941;3.25e-19;1!UBERON:0001785;3.25e-19;1!UBERON:0002464;3.25e-19;1!UBERON:0004904;3.25e-19;1!UBERON:0001021;3.25e-19;1!UBERON:0004177;1.88e-15;5!UBERON:0005057;1.88e-15;5!UBERON:0000945;2.70e-15;5!UBERON:0010039;2.70e-15;5!UBERON:0000991;3.05e-14;21!UBERON:0003101;1.30e-13;22!UBERON:0000079;1.30e-13;22!UBERON:0001905;2.72e-10;2!UBERON:0003714;2.72e-10;2!UBERON:0005162;2.72e-10;2!UBERON:0000122;2.72e-10;2!UBERON:0002757;2.72e-10;2!UBERON:0010134;2.72e-10;2!UBERON:0005408;2.72e-10;2!UBERON:0001899;2.72e-10;2!UBERON:0000922;6.13e-09;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.64e-36,8;UBERON:0003135,1.06e-26,11;UBERON:0000941,3.25e-19,1;UBERON:0001785,3.25e-19,1;UBERON:0002464,3.25e-19,1;UBERON:0004904,3.25e-19,1;UBERON:0001021,3.25e-19,1;UBERON:0003902,3.25e-19,1;UBERON:0005425,3.25e-19,1;UBERON:0002370,3.57e-19,4;UBERON:0005058,3.57e-19,4;UBERON:0009113,3.57e-19,4;UBERON:0003295,3.57e-19,4;UBERON:0005562,3.57e-19,4;UBERON:0000991,3.39e-14,21;UBERON:0009196,3.39e-14,21;UBERON:0009117,3.39e-14,21;UBERON:0005564,3.39e-14,21;UBERON:0004176,1.44e-13,22;UBERON:0003101,1.44e-13,22;UBERON:0000079,1.44e-13,22;UBERON:0003351,4.01e-13,6;UBERON:0004177,2.18e-11,7;UBERON:0005057,2.18e-11,7;UBERON:0001905,2.27e-10,2;UBERON:0002757,2.27e-10,2;UBERON:0010134,2.27e-10,2;UBERON:0005408,2.27e-10,2;UBERON:0001899,2.27e-10,2;UBERON:0003714,2.72e-10,2;UBERON:0005162,2.72e-10,2;UBERON:0000122,2.72e-10,2;UBERON:0000945,6.34e-10,8;UBERON:0010039,6.34e-10,8;UBERON:0000974,3.03e-08,10;UBERON:0003408,3.03e-08,10;UBERON:0001042,3.03e-08,10;UBERON:0009145,3.03e-08,10;UBERON:0006562,1.42e-07,11;UBERON:0009722,1.42e-07,11;UBERON:0007690,1.42e-07,11 | |||
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| ||
|short_description=p1@AIRE | |||
}} | }} |
Latest revision as of 18:33, 18 September 2015
Short description: | p1@AIRE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AIRE_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 0bp_to_ENST00000291582, NM_000383, uc002zei.2_5end |
EntrezGene: | AIRE |
HGNC: | 360 |
UniProt: | O43918 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.21e-41 | 7 |
germ cell | 1.21e-41 | 7 |
epithelial cell of stomach | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.44e-13 | 22 |
germ cell cancer | 1.44e-13 | 22 |