FFCP PHASE1:Hg19::chr21:46359907..46359962,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:46359907..46359962,+ to FFCP PHASE1:Hg19::chr21:46359907..46359962,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=85395 | |EntrezGene=85395 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15811 | |HGNC=15811 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NSI2,C9JJU7 | |UniProt=Q9NSI2,C9JJU7 | ||
|association_with_transcript=0bp_to_ENST00000291634,ENST00000397826,ENST00000458015,NM_058190,uc002zgl.2,uc002zgm.2_5end | |||
|cluster_id=chr21:46359907..46359962,+ | |||
|coexpression_cluster_id=C2487 | |||
|description=CAGE_peak_1_at_FAM207A_5end | |||
|id=chr21:46359907..46359962,+ | |||
|ontology_enrichment_celltype=CL:0002321!5.48e-24!248;CL:0000220!3.28e-23!246;CL:0000066!1.51e-20!254;CL:0000222!8.17e-16!119;CL:0000548!7.59e-13!679;CL:0000004!7.59e-13!679;CL:0000255!7.59e-13!679;CL:0000012!1.47e-12!682;CL:0000055!2.60e-09!180;CL:0000183!3.38e-09!59;CL:0002078!1.23e-08!44;CL:0000115!1.38e-08!35;CL:0000213!7.75e-08!57;CL:0000215!7.75e-08!57;CL:0000680!9.16e-08!57;CL:0000056!9.16e-08!57;CL:0000355!9.16e-08!57;CL:0000393!9.37e-08!60;CL:0000211!9.37e-08!60;CL:0000071!9.52e-08!18;CL:0002546!9.52e-08!18;CL:0000187!1.70e-07!54;CL:0000144!4.44e-07!625;CL:0000076!6.36e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000071;8.30e-08;18!CL:0000115;9.17e-08;36!CL:1000449;6.18e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.79e-24,250;CL:0000066,1.02e-20,253;CL:0000222,6.74e-16,121;CL:0002078,5.83e-09,45;CL:0000115,6.32e-09,36;CL:0000213,3.91e-08,58;CL:0000215,3.91e-08,58;CL:0000071,9.52e-08,18;CL:0002546,9.52e-08,18;CL:0000680,1.55e-07,58;CL:0000056,1.55e-07,58;CL:0000355,1.55e-07,58;CL:0000393,1.56e-07,61;CL:0000211,1.56e-07,61;CL:0000187,2.90e-07,55;CL:1000449,5.57e-07,15;CL:0000076,7.70e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;8.30e-08;18 | |||
|ontology_enrichment_disease=DOID:162!2.75e-10!235;DOID:14566!6.16e-10!239;DOID:0050687!3.66e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.75e-10,235;DOID:14566,6.16e-10,239;DOID:0050687,3.66e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0003104!7.09e-17!238;UBERON:0009142!7.09e-17!238;UBERON:0003914!9.38e-15!118;UBERON:0005256!2.34e-13!143;UBERON:0000490!3.23e-13!138;UBERON:0002100!5.63e-12!216;UBERON:0002049!8.27e-11!79;UBERON:0007798!8.27e-11!79;UBERON:0004872!1.97e-10!84;UBERON:0000055!2.53e-10!69;UBERON:0001981!3.19e-10!60;UBERON:0007500!3.19e-10!60;UBERON:0004537!3.19e-10!60;UBERON:0006965!3.19e-10!60;UBERON:0000119!5.95e-10!312;UBERON:0000486!8.65e-10!82;UBERON:0004290!1.76e-09!70;UBERON:0000483!1.94e-09!309;UBERON:0000914!7.57e-09!83;UBERON:0002329!7.57e-09!83;UBERON:0003077!7.57e-09!83;UBERON:0003059!7.57e-09!83;UBERON:0007282!7.57e-09!83;UBERON:0009618!7.57e-09!83;UBERON:0007285!7.57e-09!83;UBERON:0000481!7.74e-09!347;UBERON:0001134!5.06e-08!61;UBERON:0002036!5.06e-08!61;UBERON:0003082!5.06e-08!61;UBERON:0001048!8.53e-08!168;UBERON:0001986!9.52e-08!18;UBERON:0004638!9.52e-08!18;UBERON:0004852!9.52e-08!18;UBERON:0000487!1.74e-07!22;UBERON:0001637!2.18e-07!42;UBERON:0003509!2.18e-07!42;UBERON:0004572!2.18e-07!42;UBERON:0002385!4.25e-07!63;UBERON:0001015!4.25e-07!63;UBERON:0000383!4.25e-07!63;UBERON:0006914!5.46e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.30e-08;18!UBERON:0001986;8.30e-08;18!UBERON:0004852;8.30e-08;18!UBERON:0003914;1.04e-07;74!UBERON:0000487;1.52e-07;22!UBERON:0006914;5.17e-07;25!UBERON:0006555;6.18e-07;15!UBERON:0004819;6.18e-07;15!UBERON:0001285;6.18e-07;15!UBERON:0007684;6.18e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,5.47e-15,117;UBERON:0000490,1.38e-14,148;UBERON:0003104,6.92e-14,160;UBERON:0009142,6.92e-14,160;UBERON:0002100,5.27e-13,199;UBERON:0007503,6.55e-12,78;UBERON:0005256,9.05e-12,122;UBERON:0002049,6.95e-11,78;UBERON:0007798,6.95e-11,78;UBERON:0004872,1.69e-10,83;UBERON:0000055,2.07e-10,68;UBERON:0007500,2.52e-10,59;UBERON:0001981,2.52e-10,59;UBERON:0004537,2.52e-10,59;UBERON:0006965,2.52e-10,59;UBERON:0000119,5.36e-10,309;UBERON:0000486,1.42e-09,83;UBERON:0000483,1.76e-09,306;UBERON:0002329,3.02e-09,71;UBERON:0003059,3.02e-09,71;UBERON:0007282,3.02e-09,71;UBERON:0004290,3.02e-09,71;UBERON:0009618,3.02e-09,71;UBERON:0003077,4.57e-09,72;UBERON:0007285,4.57e-09,72;UBERON:0007524,1.15e-08,73;UBERON:0001134,8.49e-08,62;UBERON:0002036,8.49e-08,62;UBERON:0003082,8.49e-08,62;UBERON:0004638,9.52e-08,18;UBERON:0001986,9.52e-08,18;UBERON:0004852,9.52e-08,18;UBERON:0000487,1.74e-07,22;UBERON:0001637,2.18e-07,42;UBERON:0003509,2.18e-07,42;UBERON:0004572,2.18e-07,42;UBERON:0001048,2.48e-07,160;UBERON:0006914,5.46e-07,25;UBERON:0004211,5.57e-07,15;UBERON:0009773,5.57e-07,15;UBERON:0001231,5.57e-07,15;UBERON:0001285,5.57e-07,15;UBERON:0007684,5.57e-07,15;UBERON:0004208,5.57e-07,15;UBERON:0002385,6.70e-07,64;UBERON:0001015,6.70e-07,64;UBERON:0000383,6.70e-07,64 | |||
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| ||
|short_description=p1@FAM207A | |||
}} | }} |
Latest revision as of 20:17, 18 September 2015
Short description: | p1@FAM207A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM207A_5end |
Coexpression cluster: | C2487_Alveolar_Mesenchymal_Renal_Placental_Bronchial_acute_Tracheal |
Association with transcript: | 0bp_to_ENST00000291634, ENST00000397826, ENST00000458015, NM_058190, uc002zgl.2, uc002zgm.2_5end |
EntrezGene: | FAM207A |
HGNC: | 15811 |
UniProt: | Q9NSI2C9JJU7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.79e-24 | 250 |
epithelial cell | 1.02e-20 | 253 |
mesodermal cell | 6.74e-16 | 121 |
meso-epithelial cell | 5.83e-09 | 45 |
endothelial cell | 6.32e-09 | 36 |
lining cell | 3.91e-08 | 58 |
barrier cell | 3.91e-08 | 58 |
blood vessel endothelial cell | 9.52e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.52e-08 | 18 |
muscle precursor cell | 1.55e-07 | 58 |
myoblast | 1.55e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.55e-07 | 58 |
electrically responsive cell | 1.56e-07 | 61 |
electrically active cell | 1.56e-07 | 61 |
muscle cell | 2.90e-07 | 55 |
epithelial cell of nephron | 5.57e-07 | 15 |
squamous epithelial cell | 7.70e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.75e-10 | 235 |
disease of cellular proliferation | 6.16e-10 | 239 |
cell type cancer | 3.66e-07 | 143 |