FFCP PHASE1:Hg19::chr2:142889034..142889073,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:142889034..142889073,- to FFCP PHASE1:Hg19::chr2:142889034..142889073,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=53353 | |EntrezGene=53353 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6693 | |HGNC=6693 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZR2,Q96NT6 | |UniProt=Q9NZR2,Q96NT6 | ||
|association_with_transcript=196bp_to_ENST00000389484,NM_018557,uc002tvj.1,uc010fnl.1_5end | |||
|cluster_id=chr2:142889034..142889073,- | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_4_at_LRP1B_5end | |||
|id=chr2:142889034..142889073,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.55e-23;82!UBERON:0006241;2.61e-08;3!UBERON:0003057;2.61e-08;3!UBERON:0006215;1.40e-07;3 | |||
|ontology_enrichment_disease=DOID:0050687!5.00e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.23e-54!57;UBERON:0005068!3.23e-54!57;UBERON:0006241!3.23e-54!57;UBERON:0007135!3.23e-54!57;UBERON:0002616!2.94e-52!59;UBERON:0001017!8.16e-52!82;UBERON:0005743!8.43e-50!86;UBERON:0000955!2.12e-49!69;UBERON:0006238!2.12e-49!69;UBERON:0000073!2.38e-45!94;UBERON:0001016!2.38e-45!94;UBERON:0003080!1.16e-41!42;UBERON:0002346!3.59e-41!90;UBERON:0007023!4.26e-41!115;UBERON:0002780!6.13e-41!41;UBERON:0001890!6.13e-41!41;UBERON:0006240!6.13e-41!41;UBERON:0003075!4.28e-38!86;UBERON:0007284!4.28e-38!86;UBERON:0002020!1.89e-34!34;UBERON:0003528!1.89e-34!34;UBERON:0001893!5.03e-34!34;UBERON:0002791!4.39e-33!33;UBERON:0001869!4.57e-32!32;UBERON:0000153!1.93e-30!129;UBERON:0007811!1.93e-30!129;UBERON:0000033!6.02e-30!123;UBERON:0000924!1.66e-29!173;UBERON:0006601!1.66e-29!173;UBERON:0003056!7.90e-29!61;UBERON:0004121!4.61e-27!169;UBERON:0000956!1.03e-24!25;UBERON:0000203!1.03e-24!25;UBERON:0002619!3.45e-22!22;UBERON:0001950!6.23e-20!20;UBERON:0000475!2.00e-15!365;UBERON:0000477!2.30e-13!286;UBERON:0003076!2.96e-13!15;UBERON:0003057!2.96e-13!15;UBERON:0000481!9.33e-13!347;UBERON:0000062!2.61e-11!511;UBERON:0002420!3.19e-11!9;UBERON:0007245!3.19e-11!9;UBERON:0010009!3.19e-11!9;UBERON:0010011!3.19e-11!9;UBERON:0000454!3.19e-11!9;UBERON:0002308!3.83e-11!9;UBERON:0000125!3.83e-11!9;UBERON:0000922!1.27e-10!612;UBERON:0000025!1.57e-10!194;UBERON:0004733!3.00e-10!12;UBERON:0002028!3.00e-10!12;UBERON:0007277!3.00e-10!12;UBERON:0000468!4.63e-10!659;UBERON:0004111!1.21e-09!241;UBERON:0002050!1.24e-09!605;UBERON:0005423!1.24e-09!605;UBERON:0002298!1.25e-09!8;UBERON:0000923!2.82e-09!604;UBERON:0005291!2.82e-09!604;UBERON:0006598!2.82e-09!604;UBERON:0002532!2.82e-09!604;UBERON:0004732!3.45e-09!13;UBERON:0000064!3.90e-09!219;UBERON:0009663!6.45e-09!7;UBERON:0001894!3.22e-08!7;UBERON:0006222!3.22e-08!7;UBERON:0000483!4.26e-08!309;UBERON:0000200!6.88e-08!6;UBERON:0000119!8.71e-08!312;UBERON:0001871!2.58e-07!7;UBERON:0002680!3.03e-07!9;UBERON:0001895!3.03e-07!9;UBERON:0010092!3.03e-07!9;UBERON:0000349!3.25e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.86e-56;34!UBERON:0002020;1.86e-56;34!UBERON:0002780;5.83e-56;41!UBERON:0001890;5.83e-56;41!UBERON:0001893;1.99e-55;34!UBERON:0000073;4.21e-55;53!UBERON:0002616;4.21e-55;53!UBERON:0002791;8.32e-55;32!UBERON:0001869;1.10e-54;32!UBERON:0000956;1.24e-45;25!UBERON:0000203;1.24e-45;25!UBERON:0002619;7.92e-44;22!UBERON:0001950;5.94e-39;20!UBERON:0000955;5.71e-32;68!UBERON:0001017;2.48e-30;75!UBERON:0001016;1.98e-28;83!UBERON:0002420;1.92e-22;9!UBERON:0007245;1.92e-22;9!UBERON:0010009;1.92e-22;9!UBERON:0010011;1.92e-22;9!UBERON:0000454;1.92e-22;9!UBERON:0000125;2.79e-22;9!UBERON:0002308;2.79e-22;9!UBERON:0009663;1.87e-17;7!UBERON:0001894;3.38e-16;7!UBERON:0007023;5.87e-16;114!UBERON:0004733;1.98e-15;12!UBERON:0002028;1.98e-15;12!UBERON:0000200;2.07e-15;6!UBERON:0002298;2.41e-15;6!UBERON:0004732;4.26e-14;13!UBERON:0000349;8.04e-14;5!UBERON:0001872;2.89e-12;5!UBERON:0002021;5.38e-12;5!UBERON:0011216;1.90e-11;132!UBERON:0000369;9.25e-11;4!UBERON:0002435;9.25e-11;4!UBERON:0000204;9.25e-11;4!UBERON:0003296;9.73e-10;4!UBERON:0010133;9.73e-10;4!UBERON:0002784;9.73e-10;4!UBERON:0001871;1.81e-09;6!UBERON:0002680;1.94e-09;9!UBERON:0001895;1.94e-09;9!UBERON:0001870;9.67e-09;3!UBERON:0000988;1.14e-08;3!UBERON:0005383;1.63e-08;3!UBERON:0005382;1.63e-08;3!UBERON:0001896;2.31e-08;3!UBERON:0005290;2.31e-08;3!UBERON:0002240;2.61e-08;3!UBERON:0005174;2.61e-08;3!UBERON:0001137;2.61e-08;3!UBERON:0010314;2.63e-08;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.92e-102,56;UBERON:0005068,1.92e-102,56;UBERON:0006241,1.92e-102,56;UBERON:0007135,1.92e-102,56;UBERON:0000073,2.48e-95,53;UBERON:0002616,2.48e-95,53;UBERON:0001017,7.08e-81,81;UBERON:0002780,8.99e-81,41;UBERON:0001890,8.99e-81,41;UBERON:0003080,8.99e-81,41;UBERON:0006240,8.99e-81,41;UBERON:0000955,5.26e-77,68;UBERON:0006238,5.26e-77,68;UBERON:0001016,3.22e-74,89;UBERON:0002346,1.96e-67,86;UBERON:0003528,1.31e-66,34;UBERON:0002020,1.31e-66,34;UBERON:0003075,8.15e-66,82;UBERON:0007284,8.15e-66,82;UBERON:0001893,1.01e-65,34;UBERON:0002791,1.16e-61,32;UBERON:0001869,1.82e-61,32;UBERON:0010371,1.23e-53,104;UBERON:0003056,5.82e-51,61;UBERON:0007023,3.82e-50,114;UBERON:0000956,1.40e-45,25;UBERON:0000203,1.40e-45,25;UBERON:0010314,5.25e-45,132;UBERON:0002619,9.90e-44,22;UBERON:0004121,1.17e-42,171;UBERON:0000924,1.17e-42,171;UBERON:0006601,1.17e-42,171;UBERON:0001950,7.64e-39,20;UBERON:0011216,2.00e-31,223;UBERON:0000025,8.49e-24,192;UBERON:0002420,1.72e-22,9;UBERON:0007245,1.72e-22,9;UBERON:0010009,1.72e-22,9;UBERON:0010011,1.72e-22,9;UBERON:0000454,1.72e-22,9;UBERON:0000125,2.57e-22,9;UBERON:0002308,2.57e-22,9;UBERON:0003076,8.87e-22,15;UBERON:0003057,8.87e-22,15;UBERON:0004111,6.22e-20,240;UBERON:0009663,1.72e-17,7;UBERON:0001894,5.58e-16,7;UBERON:0006222,5.58e-16,7;UBERON:0004733,1.60e-15,12;UBERON:0002028,1.60e-15,12;UBERON:0007277,1.60e-15,12;UBERON:0002298,1.88e-15,6;UBERON:0000200,2.87e-15,6;UBERON:0000483,5.46e-15,306;UBERON:0000119,1.07e-14,309;UBERON:0004732,3.52e-14,13;UBERON:0000349,8.17e-14,5;UBERON:0001872,3.82e-12,5;UBERON:0002021,5.09e-12,5;UBERON:0000369,9.39e-11,4;UBERON:0002435,9.39e-11,4;UBERON:0000204,9.39e-11,4;UBERON:0010082,9.39e-11,4;UBERON:0002784,1.31e-09,4;UBERON:0003296,1.40e-09,4;UBERON:0010133,1.40e-09,4;UBERON:0002680,1.76e-09,9;UBERON:0001895,1.76e-09,9;UBERON:0010092,1.76e-09,9;UBERON:0001871,1.80e-09,6;UBERON:0000923,1.94e-09,560;UBERON:0010316,1.94e-09,560;UBERON:0005291,1.94e-09,560;UBERON:0006598,1.94e-09,560;UBERON:0010317,1.94e-09,560;UBERON:0002532,1.94e-09,560;UBERON:0002050,3.05e-09,564;UBERON:0000922,3.21e-09,592;UBERON:0005423,4.35e-09,581;UBERON:0000988,1.02e-08,3;UBERON:0001870,1.10e-08,3;UBERON:0005383,1.53e-08,3;UBERON:0005382,1.53e-08,3;UBERON:0001896,2.01e-08,3;UBERON:0005290,2.01e-08,3;UBERON:0010096,2.01e-08,3;UBERON:0002240,2.52e-08,3;UBERON:0005174,2.52e-08,3;UBERON:0001137,2.52e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0.204000691244253,0.313454721478088,2.57612388417951,1.50561867580173,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.263504357079378,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.473227200159376,0,0.241011029883482,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0.0895585227028483,0,0,1.47798971368783,0,1.03664057770386,3.45887888200707,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,1.64381058040307,0,0,0,0,0,0.76228387266739,0,0,0.167516265334349,1.27587750330633,0,0,0,0.981531933753119,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.38126038784765,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,9.62479855263359,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21360521749513,0,0,0,0,0,10.9356241254293,12.9415863097672,0,0,0,0.398495976502139,0.276283915531148,0.251932747854276,0.306806047506464,0,0,0,0.895105873378046,0,0.0986434056369336,0,0,0.969332746095218,1.85536196323703,0,0.260427761085233,163.112899992905,0.724999575434793,0.1137934482855,0.254253650292766,0.236387681767936,0.344743373241465,1.74962768029953,0,3.54296554325536,9.76831152865804,1.52581736317083,5.63954225649246,1.47773809476774,1.97446857438575,0,0,0.230850775511391,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,2.08943512240099,0,2.10838001152805,0,0,0,0.789168805698781,0,0.30607276163049,4.99173979065055,0.901940516486955,0.72581733978073,0,0.330991955875499,0.313932918407225,0,17.6457918538472,0,0,0,0,1.7472666824203,0,0.870806981601766,0.950161122120412,0.739039113478883,0.0969890164884194,0,0,0.137041924646751,0,4.17851253308799,0.782205530939212,0,0.213452994739353,0,0,0,0.171594997861965,0,0.124252535565433,0,0,0,0,0.288950589901519,3.60252173225874,8.62503887019556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,7.15706720828373,11.5772895194839,0,0,0,0,0,3.58422384282346,0,0.788057072991982,0.472091293214983,0,0.35857467866569,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,6.33486486171598,10.3141429359298,0,2.81926008926669,0,0,0,0.496166021811951,0,0,0,0.544017803369474,0,0.306345576763462,0.327872630709804,0.157054096250234,5.31640907980192,4.39294553647067,11.517565624998,2.86704597845036,5.43552352530576,6.02335108531419,0,4.99921631848426,0.151649117541648,0,0,0,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0.512483037175893,0,0,12.1667423813523,0,0,0,0,9.58514344139505,0,0,0.106691729694141,0,0,0.184105950251841,0,0,0,0.107824811396682,1.57265941855896,0,0.33946505990805,1.48802444071178,1.61116493536703,0,0,0,0.80057074828547,0,1.531227386766,4.17489963126987,2.8339315265117,11.1743701340006,2.46139637088906,1.26035848110859,2.62797559364028,2.09918339321406,0,0.0981477185010256,0.825788063434183,0,0,0,0,0,0.376051641746286,0,0,0,0,0.147856086217045,2.16120270778863,2.34323429584154,8.88753224955092,2.34638497717455,2.18789923607288,1.09651553371436,0.496211178389294,0.703484977438482,0.894336993477167,1.07140367175657,1.3451348888753,5.46269043812968,3.41493287026946,0,0,0.171488009437418,3.67036558074891,3.28863867814245,0,0,0.156986185701028,4.71346769748006,0,0,0.431855182437243,0,0.571812353413251,0,1.62737995515375,0,0,0,0,0,3.01159151174194,0,0,0.423387050190929,0.22910686854405,0,0,0,0,0.975343399858155,0,0,0,0.485710993059139,0.233939463462106,0,0,8.80979439903888,0,0,0.154348316215889,0.218559560503957,0,0,0.471353094203252,4.51509474364374,7.12911360785006,2.5359343655004,0,0,0,0,2.85686301769052,0,0.160482733378337,0,1.37618785021362,3.58348957878628,0,2.51568513706384,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,3.31667775783512,5.89568076412803,0.639701945702943,5.47548192366603,0,0.06207471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| ||
|short_description=p4@LRP1B | |||
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Latest revision as of 04:55, 17 September 2015
Short description: | p4@LRP1B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LRP1B_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 196bp_to_ENST00000389484, NM_018557, uc002tvj.1, uc010fnl.1_5end |
EntrezGene: | LRP1B |
HGNC: | 6693 |
UniProt: | Q9NZR2Q96NT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data