FFCP PHASE1:Hg19::chr2:158295915..158295944,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:158295915..158295944,- to FFCP PHASE1:Hg19::chr2:158295915..158295944,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9595 | |EntrezGene=9595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9506 | |HGNC=9506 | ||
|TSSclassifier=strong | |||
|UniProt=C9JSM2 | |UniProt=C9JSM2 | ||
|association_with_transcript=0bp_to_ENST00000418920_5end | |||
|cluster_id=chr2:158295915..158295944,- | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_5_at_CYTIP_5end | |||
|id=chr2:158295915..158295944,- | |||
|ontology_enrichment_celltype=CL:0000738!4.95e-34!140;CL:0002087!1.37e-27!119;CL:0002031!3.30e-25!124;CL:0000037!2.52e-23!172;CL:0000566!2.52e-23!172;CL:0000791!1.58e-22!18;CL:0000789!1.58e-22!18;CL:0002420!1.58e-22!18;CL:0002419!1.58e-22!18;CL:0000790!1.58e-22!18;CL:0000838!5.29e-22!52;CL:0002032!5.38e-22!165;CL:0000837!5.38e-22!165;CL:0000542!2.28e-21!53;CL:0000051!2.28e-21!53;CL:0000988!8.43e-21!182;CL:0000084!8.14e-18!25;CL:0000827!8.14e-18!25;CL:0000625!1.03e-15!11;CL:0000990!1.64e-10!8;CL:0000624!3.77e-10!6;CL:0002057!1.11e-09!42;CL:0000766!6.05e-09!76;CL:0000860!1.27e-08!45;CL:0000451!3.28e-08!10;CL:0002009!7.41e-08!65;CL:0000453!8.97e-08!5;CL:0000557!3.58e-07!71;CL:0000840!6.80e-07!5;CL:0001029!6.80e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.21e-42;18!CL:0000789;1.21e-42;18!CL:0002419;1.21e-42;18!CL:0000084;2.42e-29;25!CL:0000625;7.88e-29;11!CL:0000624;3.26e-18;6!CL:0000453;9.42e-14;5!CL:0000542;2.12e-11;53!CL:0000898;4.69e-10;3!CL:0000226;1.27e-09;3!CL:0000842;1.27e-09;3!CL:0000623;5.62e-09;3!CL:0000990;1.82e-07;8!CL:0000815;3.04e-07;2!CL:0000792;3.04e-07;2!CL:0002677;3.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.06e-43,18;CL:0000789,7.06e-43,18;CL:0002420,7.06e-43,18;CL:0002419,7.06e-43,18;CL:0000790,7.06e-43,18;CL:0000084,1.66e-29,25;CL:0000827,1.66e-29,25;CL:0000625,4.68e-29,11;CL:0000838,1.20e-22,52;CL:0000542,4.26e-22,53;CL:0000051,4.26e-22,53;CL:0000738,3.09e-20,136;CL:0000624,3.15e-18,6;CL:0002087,1.35e-14,115;CL:0000037,1.78e-14,168;CL:0000453,1.27e-13,5;CL:0000988,3.04e-13,177;CL:0002031,2.08e-12,120;CL:0002032,2.39e-12,161;CL:0000837,2.39e-12,161;CL:0000898,4.71e-10,3;CL:0000226,1.29e-09,3;CL:0000842,1.29e-09,3;CL:0000623,5.96e-09,3;CL:0000825,5.96e-09,3;CL:0000990,2.13e-07,8;CL:0000815,3.04e-07,2;CL:0000792,3.04e-07,2;CL:0002677,3.04e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.21e-42;18!CL:0000051;2.12e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.34e-15!102;UBERON:0003061!8.34e-15!102;UBERON:0002193!4.30e-14!112;UBERON:0000178!2.37e-09!15;UBERON:0000179!2.37e-09!15;UBERON:0000463!2.37e-09!15;UBERON:0007023!8.40e-09!115;UBERON:0002405!8.21e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.48e-10;15!UBERON:0000179;4.48e-10;15!UBERON:0000463;4.48e-10;15!UBERON:0002390;4.48e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.06e-10,15;UBERON:0000179,5.06e-10,15;UBERON:0000463,5.06e-10,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.410502947249729,0.157421562627358,0.393364276848904,2.30297638858328,0.309632246632152,0,0,0,0,0,0,1.10799081706375,1.60435557976113,1.08505435357926,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0.28769239232215,0.512321413058201,0,0,0.645484683583826,0,0.376484679085209,1.63743690034707,0,0.306083892370903,0.962787081228281,0,0,0.398927315243264,0,0.290209238628584,0.56738522469114,0,0,1.0429658368404,0,0,0.736555271975129,0.632924774881769,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0.855038231223746,0.99458338599545,0.182664153764634,0,0,0,0,0,0,0,0,1.1384259382189,2.34894875748376,0.764546456250458,1.32171328579026,2.80254281490768,0,7.67168103443949,6.6811829667358,8.01845846098086,4.84840836632966,16.2961133316795,18.9379122293893,11.6896037044747,2.56244050835899,9.13278313171995,5.98141515375777,5.41607727530031,3.33037431286755,3.25148368899696,3.28875809207352,1.93445012450094,3.76744011455568,19.4255397742299,17.3901538258314,10.4535523804977,1.81294948316106,12.6462762888634,6.18529401868734,6.32549230048757,3.18565414324097,3.25541726928209,1.90090408889675,3.76437797694432,3.58362511232371,3.74792179657038,3.78843603270427,2.46338399076314,5.44338206706778,4.54648332831962,5.93780055919476,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.324547393654683,0.348259474598534,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15249216323084,2.80315847317372,3.46526197955321,0,0,0.773288812777695,0,0,0.749007023947182,2.99161459204025,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.6165768359324,5.60856922128404,4.26910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,1.52927441428475,0.569647187174163,0.952927101831156,1.23408681925858,1.29694662238543,1.62009431171434,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0.19924798825107,1.93398740871803,0,0,0.861593638227486,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0.173624994933292,0,0,0,0,0,0,0,0,0.0769502585037971,1.13942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,2.41981432097328,0,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.859530882839914,0,0.558564802544508,0.229160424011684,0,0.199679000498991,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,3.59958226482401,2.32140586367385,0,0,0.157611414598396,0,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,0.628817220398664,0,4.46549419630756,1.18566979138767,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09206648562716,2.25870228532717,2.28991551958182,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0.227662191351298,0,1.26757386311357,0,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,1.23040974977572,0,0,0,0,0,0,0,0,0,0,0,0,0.617393264863557,0.218559560503957,0,0,0,0,0,0,0,0.657887425858975,0.322289439867886,1.29923502702408,0,0,0,0,0.458729283404541,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0.213233981900981,0.23806443146374,1.29177819672012,1.73809200028402,0,0.381882949668989,0,0,1.02669990325584,1.75115337837928,0.573777643141411,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,1.40891655513718,0.961705476909699 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| ||
|short_description=p5@CYTIP | |||
}} | }} |
Latest revision as of 17:28, 17 September 2015
Short description: | p5@CYTIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CYTIP_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 0bp_to_ENST00000418920_5end |
EntrezGene: | CYTIP |
HGNC: | 9506 |
UniProt: | C9JSM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.06e-43 | 18 |
alpha-beta T cell | 7.06e-43 | 18 |
immature T cell | 7.06e-43 | 18 |
mature T cell | 7.06e-43 | 18 |
immature alpha-beta T cell | 7.06e-43 | 18 |
T cell | 1.66e-29 | 25 |
pro-T cell | 1.66e-29 | 25 |
CD8-positive, alpha-beta T cell | 4.68e-29 | 11 |
lymphoid lineage restricted progenitor cell | 1.20e-22 | 52 |
lymphocyte | 4.26e-22 | 53 |
common lymphoid progenitor | 4.26e-22 | 53 |
leukocyte | 3.09e-20 | 136 |
CD4-positive, alpha-beta T cell | 3.15e-18 | 6 |
nongranular leukocyte | 1.35e-14 | 115 |
hematopoietic stem cell | 1.78e-14 | 168 |
Langerhans cell | 1.27e-13 | 5 |
hematopoietic cell | 3.04e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 2.08e-12 | 120 |
hematopoietic oligopotent progenitor cell | 2.39e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.39e-12 | 161 |
naive T cell | 4.71e-10 | 3 |
single nucleate cell | 1.29e-09 | 3 |
mononuclear cell | 1.29e-09 | 3 |
natural killer cell | 5.96e-09 | 3 |
pro-NK cell | 5.96e-09 | 3 |
conventional dendritic cell | 2.13e-07 | 8 |
regulatory T cell | 3.04e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.04e-07 | 2 |
naive regulatory T cell | 3.04e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 5.06e-10 | 15 |
haemolymphatic fluid | 5.06e-10 | 15 |
organism substance | 5.06e-10 | 15 |