FFCP PHASE1:Hg19::chr2:172949484..172949522,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:172949484..172949522,+ to FFCP PHASE1:Hg19::chr2:172949484..172949522,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1745 | |EntrezGene=1745 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2914 | |HGNC=2914 | ||
|TSSclassifier=strong | |||
|UniProt=F8VXJ2 | |UniProt=F8VXJ2 | ||
|association_with_transcript=7bp_to_ENST00000469444_5end | |||
|cluster_id=chr2:172949484..172949522,+ | |||
|coexpression_cluster_id=C1884 | |||
|description=CAGE_peak_1_at_DLX1_5end | |||
|id=chr2:172949484..172949522,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.74e-13!180;CL:0000057!2.75e-08!75;CL:0002620!2.93e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.21e-09;23!CL:0002556;8.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,5.02e-09,23;CL:0000057,2.22e-07,76;CL:0002556,7.57e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.71e-13!235;DOID:14566!6.18e-13!239 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.49e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.44e-12,239;DOID:162,6.94e-12,235;DOID:8692,6.71e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0001869!8.43e-17!32;UBERON:0001893!7.66e-16!34;UBERON:0002791!3.57e-15!33;UBERON:0000956!4.61e-15!25;UBERON:0000203!4.61e-15!25;UBERON:0002619!6.58e-15!22;UBERON:0001950!3.67e-14!20;UBERON:0002020!1.74e-13!34;UBERON:0003528!1.74e-13!34;UBERON:0002780!3.74e-13!41;UBERON:0001890!3.74e-13!41;UBERON:0006240!3.74e-13!41;UBERON:0003080!1.72e-12!42;UBERON:0000073!2.91e-10!94;UBERON:0001016!2.91e-10!94;UBERON:0001017!3.44e-10!82;UBERON:0000955!1.66e-09!69;UBERON:0006238!1.66e-09!69;UBERON:0005743!2.99e-09!86;UBERON:0000924!8.68e-09!173;UBERON:0006601!8.68e-09!173;UBERON:0000033!1.47e-08!123;UBERON:0000153!6.57e-08!129;UBERON:0007811!6.57e-08!129;UBERON:0004121!9.20e-08!169;UBERON:0003102!2.98e-07!95;UBERON:0001049!5.38e-07!57;UBERON:0005068!5.38e-07!57;UBERON:0006241!5.38e-07!57;UBERON:0007135!5.38e-07!57;UBERON:0000475!8.69e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.05e-21;22!UBERON:0001950;8.42e-20;20!UBERON:0000956;3.72e-19;25!UBERON:0000203;3.72e-19;25!UBERON:0001869;7.10e-17;32!UBERON:0002791;2.06e-15;32!UBERON:0001893;7.66e-15;34!UBERON:0003528;5.19e-14;34!UBERON:0002020;5.19e-14;34!UBERON:0002780;6.51e-10;41!UBERON:0001890;6.51e-10;41!UBERON:0003129;1.14e-07;7!UBERON:0001871;1.91e-07;6!UBERON:0002097;7.66e-07;41!UBERON:0001758;8.23e-07;6!UBERON:0003672;8.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.09e-20,22;UBERON:0001950,1.29e-19,20;UBERON:0000956,5.22e-19,25;UBERON:0000203,5.22e-19,25;UBERON:0001869,1.51e-18,32;UBERON:0001893,6.55e-17,34;UBERON:0002791,8.63e-17,32;UBERON:0003528,2.76e-15,34;UBERON:0002020,2.76e-15,34;UBERON:0001016,5.72e-14,89;UBERON:0002780,2.13e-13,41;UBERON:0001890,2.13e-13,41;UBERON:0003080,2.13e-13,41;UBERON:0006240,2.13e-13,41;UBERON:0004121,1.10e-12,171;UBERON:0000924,1.10e-12,171;UBERON:0006601,1.10e-12,171;UBERON:0001017,1.43e-12,81;UBERON:0000955,5.84e-11,68;UBERON:0006238,5.84e-11,68;UBERON:0002097,1.49e-08,41;UBERON:0000073,2.11e-08,53;UBERON:0002616,2.11e-08,53;UBERON:0003056,1.07e-07,61;UBERON:0003129,1.07e-07,7;UBERON:0001049,1.59e-07,56;UBERON:0005068,1.59e-07,56;UBERON:0006241,1.59e-07,56;UBERON:0007135,1.59e-07,56;UBERON:0001871,1.75e-07,6;UBERON:0002199,7.22e-07,46;UBERON:0002416,7.22e-07,46;UBERON:0001758,7.57e-07,6;UBERON:0003672,7.57e-07,6 | |||
|phase1_expression=0.908391896352783,0,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0,0.602694528023977,0,0,0.61560529038394,0,0.313454721478088,3.14859585844162,0.547497700291537,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.80719576192283,0.50133791063589,0.144846518960824,2.3858578411533,0,0,0,0.087834785693126,1.37528029272598,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0.860234595106124,0,0,0.419499436209906,0.550236083880135,0,0,0,0.33472061276467,0.402829317109147,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0.886413581652058,0.264818361626438,1.14734648299525,2.12801029319014,1.12135520028461,0,0.24666754841716,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0.936480230490962,1.1409436430889,0.448346041655403,0,0,0,3.87892925384297,9.2125737983826,3.61640234115179,7.12801714369232,6.67620709052104,0,0,4.71341119071385,4.00379263590285,4.98715407871529,10.0964852802593,7.35570709917647,5.70904623845068,0.453728732640084,9.68704032719855,2.98980344345994,2.33125091275518,9.30282397861647,3.29768093563004,6.95629458123199,4.09457083929498,6.24472429292685,5.55390929418832,3.02920529092937,2.11714766877288,0,5.32514388774922,8.06016785821122,3.39121184620975,0,1.63647672354501,0,0,0,0.116193942869518,1.55491582523056,0,0,1.56449532329816,0,1.38134921352481,0,0,1.41968160047813,1.01150814046861,0.723033089650446,1.54411561825352,0.871517776369625,1.66089433377768,1.21348177344148,1.17732879075208,0.38474715694639,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0.402115889646523,0,0,0,0,0,0,0.144366447761074,0,0,1.58040879591855,2.57545848628462,0,0,0.148631162288728,0,0.503946384596579,0.567100388969546,0.179117045405697,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,3.34369586540785,1.41849132023278,6.39413229638638,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,4.27910715122155,1.15825045334063,1.43833425785268,0.895304816199478,0,0,0,0,18.5489075682398,6.50699269288109,14.6924874427762,23.2847608814745,15.3105300396759,0,0,0.414415513436035,0,0.500170521059677,0.271265023699736,0.415941723061614,1.07057393278297,0,0.35142424497814,0.300946099727719,0,1.03473071292505,2.65690239414175,2.21243002250044,0,0,0,0,0,0,0,0,0,0.744323423456331,0.153461973288062,0,0.128139149255701,1.02341449813341,0.160853921143607,0,0.154209693802656,0.177561725313127,1.31403449622095,1.03850885836724,0.348631135379878,0.604297247958111,0,0.0920809889358963,0,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7470839445503,3.87794649626764,1.14853107599234,0,0,1.93341436584244,0,0.921022048356777,0.275673144969061,0,0,0.255679882248303,0.623224249527161,0.165284915360978,0.192190067365106,0.638063562472921,0,2.32422774648643,1.25924938732256,0.6970372701606,0.616067160352178,0,0,1.8532421910392,1.28812398067792,0,0,0,0.255897791311334,0,2.54562598340749,1.56989728039846,0,0,0,0,1.58510321173008,0.421258456238981,0,1.21856744815642,1.05650146756755,0.272999822815972,0.141405431953713,1.13008116620243,4.41092274836899,0.66343897524122,0,0.578775534266688,0,0,0.6196469961995,0.563391205064483,0,0,0.7133421029625,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9078605895627,0.962479855263359,1.22520107990516,0,0.144269212976445,0,0.797131363644112,0,0,43.1814108756721,0.324621940274555,0,0.228234679033192,2.6635582281414,5.01268954180134,11.3425491127074,34.0446719219843,6.05399121573143,0,0,2.45792611446766,2.46043718681657,2.33588798396672,14.2633309643489,0,3.69262196843137,31.372858703214,11.3244469119259,2.81974010175699,0,0,0.242721043499027,0,2.84136146806413,0,0.593929361665277,0,6.95903353436409,4.78276015795743,0.111308705022906,0,0,0.19924798825107,0,0,0.306806047506464,0,0,0,0,23.5323290304361,0.0986434056369336,0,1.11136990144637,8.72399471485697,3.52518773015035,17.9652418201075,2.86470537193757,0.174919999992391,0,1.365521379426,0,0.236387681767936,0,4.08246458736556,2.60437492399938,0.885741385813839,0.964771509003264,0,0,0,7.23971810608109,3.2681539055697,8.08657716815899,0,0,0,0,0,0,0,0,0,0,0,4.51191321234361,2.54881294613061,2.85296697858933,1.70778359451767,0,0.421996129056054,0,0.424059214301822,3.46221823587346,0,0.0884575645033392,0,0,0,0.104421949505455,0.404406797884062,0,0.468528891450678,0,0,1.69946265673865,0,2.41981432097328,45.2987687213125,0.189559738885464,3.15679180770434,7.56923797199904,4.6525771089503,0.992975867626496,1.56966459203613,1.19472429772959,0.284609546029793,0,0,0.391969589657511,1.82824333818845,0,1.71986032471617,0.19351266257817,0.219267951258557,0.246346371159628,0.0969890164884194,0.441280633457501,0,4.11125773940253,5.56400912768371,7.47067392279369,0,0,0.426905989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| 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| ||
|short_description=p1@DLX1 | |||
}} | }} |
Latest revision as of 04:51, 18 September 2015
Short description: | p1@DLX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DLX1_5end |
Coexpression cluster: | C1884_small_parietal_temporal_duodenum_occipital_rhabdomyosarcoma_acute |
Association with transcript: | 7bp_to_ENST00000469444_5end |
EntrezGene: | DLX1 |
HGNC: | 2914 |
UniProt: | F8VXJ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 5.02e-09 | 23 |
fibroblast | 2.22e-07 | 76 |
fibroblast of periodontium | 7.57e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 1.09e-20 | 22 |
neocortex | 1.29e-19 | 20 |
cerebral cortex | 5.22e-19 | 25 |
pallium | 5.22e-19 | 25 |
cerebral hemisphere | 1.51e-18 | 32 |
telencephalon | 6.55e-17 | 34 |
regional part of telencephalon | 8.63e-17 | 32 |
brain grey matter | 2.76e-15 | 34 |
gray matter | 2.76e-15 | 34 |
nervous system | 5.72e-14 | 89 |
regional part of forebrain | 2.13e-13 | 41 |
forebrain | 2.13e-13 | 41 |
anterior neural tube | 2.13e-13 | 41 |
future forebrain | 2.13e-13 | 41 |
ectoderm-derived structure | 1.10e-12 | 171 |
ectoderm | 1.10e-12 | 171 |
presumptive ectoderm | 1.10e-12 | 171 |
central nervous system | 1.43e-12 | 81 |
brain | 5.84e-11 | 68 |
future brain | 5.84e-11 | 68 |
skin of body | 1.49e-08 | 41 |
regional part of nervous system | 2.11e-08 | 53 |
regional part of brain | 2.11e-08 | 53 |
pre-chordal neural plate | 1.07e-07 | 61 |
skull | 1.07e-07 | 7 |
neural tube | 1.59e-07 | 56 |
neural rod | 1.59e-07 | 56 |
future spinal cord | 1.59e-07 | 56 |
neural keel | 1.59e-07 | 56 |
temporal lobe | 1.75e-07 | 6 |
integument | 7.22e-07 | 46 |
integumental system | 7.22e-07 | 46 |
periodontium | 7.57e-07 | 6 |
dentition | 7.57e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.44e-12 | 239 |
cancer | 6.94e-12 | 235 |
myeloid leukemia | 6.71e-09 | 31 |