FFCP PHASE1:Hg19::chr2:232329186..232329215,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:232329186..232329215,- to FFCP PHASE1:Hg19::chr2:232329186..232329215,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4691 | |EntrezGene=4691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7667 | |HGNC=7667 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BQ02,E7EX81,B3KM80,P19338 | |UniProt=Q9BQ02,E7EX81,B3KM80,P19338 | ||
|association_with_transcript=0bp_to_ENST00000322732,ENST00000392033,NM_005381,uc002vru.2_5end | |||
|cluster_id=chr2:232329186..232329215,- | |||
|coexpression_cluster_id=C2971 | |||
|description=CAGE_peak_1_at_NCL_5end | |||
|id=chr2:232329186..232329215,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.53e-48!235;DOID:14566!9.35e-47!239;DOID:0050687!3.79e-26!143;DOID:0050686!1.45e-22!137;DOID:305!2.54e-20!106;DOID:2531!1.67e-18!51;DOID:0060083!1.67e-18!51;DOID:1240!7.63e-16!39;DOID:8692!5.22e-13!31;DOID:3095!6.93e-08!22;DOID:2994!6.93e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:1240;7.32e-13;39!DOID:8692;1.27e-12;31!DOID:2531;2.32e-11;51!DOID:0060083;2.32e-11;51!DOID:3095;6.89e-08;22!DOID:2994;6.89e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.53e-48,235;DOID:14566,9.35e-47,239;DOID:0050687,3.79e-26,143;DOID:0050686,1.45e-22,137;DOID:305,2.54e-20,106;DOID:2531,1.67e-18,51;DOID:0060083,1.67e-18,51;DOID:1240,7.63e-16,39;DOID:8692,5.22e-13,31;DOID:3095,6.93e-08,22;DOID:2994,6.93e-08,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@NCL | |||
}} | }} |
Latest revision as of 19:47, 15 September 2015
Short description: | p1@NCL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NCL_5end |
Coexpression cluster: | C2971_Mast_rhabdomyosarcoma_osteosarcoma_hepatoblastoma_malignant_acute_hepatocellular |
Association with transcript: | 0bp_to_ENST00000322732, ENST00000392033, NM_005381, uc002vru.2_5end |
EntrezGene: | NCL |
HGNC: | 7667 |
UniProt: | Q9BQ02E7EX81B3KM80P19338 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cancer | 3.53e-48 | 235 |
disease of cellular proliferation | 9.35e-47 | 239 |
cell type cancer | 3.79e-26 | 143 |
organ system cancer | 1.45e-22 | 137 |
carcinoma | 2.54e-20 | 106 |
hematologic cancer | 1.67e-18 | 51 |
immune system cancer | 1.67e-18 | 51 |
leukemia | 7.63e-16 | 39 |
myeloid leukemia | 5.22e-13 | 31 |
germ cell and embryonal cancer | 6.93e-08 | 22 |
germ cell cancer | 6.93e-08 | 22 |