FFCP PHASE1:Hg19::chr2:241375025..241375048,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:241375025..241375048,+ to FFCP PHASE1:Hg19::chr2:241375025..241375048,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2817 | |EntrezGene=2817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4449 | |HGNC=4449 | ||
|TSSclassifier=strong | |||
|UniProt=P35052 | |UniProt=P35052 | ||
|association_with_transcript=-39bp_to_ENST00000264039_5end | |||
|cluster_id=chr2:241375025..241375048,+ | |||
|description=CAGE_peak_6_at_GPC1_5end | |||
|id=chr2:241375025..241375048,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.38e-21!180;CL:0000220!2.12e-15!246;CL:0002321!3.05e-15!248;CL:0000393!3.60e-09!60;CL:0000211!3.60e-09!60;CL:0000183!4.55e-09!59;CL:0000221!7.55e-09!71;CL:0000680!3.14e-08!57;CL:0000056!3.14e-08!57;CL:0000355!3.14e-08!57;CL:0000187!7.26e-08!54;CL:0002077!2.03e-07!33;CL:0000057!2.73e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002077;5.87e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.89e-12,250;CL:0000393,4.58e-09,61;CL:0000211,4.58e-09,61;CL:0000221,8.65e-09,72;CL:0000680,8.10e-08,58;CL:0000056,8.10e-08,58;CL:0000355,8.10e-08,58;CL:0002077,9.52e-08,34;CL:0000187,1.24e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.57e-26!365;UBERON:0000119!7.97e-20!312;UBERON:0000483!1.28e-19!309;UBERON:0000481!2.43e-18!347;UBERON:0000468!4.26e-15!659;UBERON:0004121!2.81e-14!169;UBERON:0000924!2.48e-13!173;UBERON:0006601!2.48e-13!173;UBERON:0000033!1.65e-12!123;UBERON:0000467!4.36e-12!625;UBERON:0000922!4.72e-12!612;UBERON:0000064!5.90e-12!219;UBERON:0000486!7.09e-12!82;UBERON:0000480!7.97e-12!626;UBERON:0002050!1.09e-11!605;UBERON:0005423!1.09e-11!605;UBERON:0000153!1.23e-11!129;UBERON:0007811!1.23e-11!129;UBERON:0000914!1.24e-11!83;UBERON:0002329!1.24e-11!83;UBERON:0003077!1.24e-11!83;UBERON:0003059!1.24e-11!83;UBERON:0007282!1.24e-11!83;UBERON:0009618!1.24e-11!83;UBERON:0007285!1.24e-11!83;UBERON:0005256!1.63e-11!143;UBERON:0000923!1.68e-11!604;UBERON:0005291!1.68e-11!604;UBERON:0006598!1.68e-11!604;UBERON:0002532!1.68e-11!604;UBERON:0004290!6.89e-10!70;UBERON:0003102!1.36e-09!95;UBERON:0003075!1.53e-09!86;UBERON:0007284!1.53e-09!86;UBERON:0002100!4.16e-09!216;UBERON:0005743!5.13e-09!86;UBERON:0001134!6.76e-09!61;UBERON:0002036!6.76e-09!61;UBERON:0003082!6.76e-09!61;UBERON:0004111!9.19e-09!241;UBERON:0002346!1.74e-08!90;UBERON:0001017!1.75e-08!82;UBERON:0002385!1.91e-08!63;UBERON:0001015!1.91e-08!63;UBERON:0000383!1.91e-08!63;UBERON:0000477!4.20e-08!286;UBERON:0003056!1.43e-07!61;UBERON:0000025!2.47e-07!194;UBERON:0000062!2.94e-07!511;UBERON:0000073!3.14e-07!94;UBERON:0001016!3.14e-07!94;UBERON:0003104!3.62e-07!238;UBERON:0009142!3.62e-07!238;UBERON:0000955!6.78e-07!69;UBERON:0006238!6.78e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,3.90e-14,309;UBERON:0000483,3.91e-14,306;UBERON:0010314,2.63e-12,132;UBERON:0000486,2.03e-11,83;UBERON:0004121,4.52e-11,171;UBERON:0000924,4.52e-11,171;UBERON:0006601,4.52e-11,171;UBERON:0007524,1.82e-10,73;UBERON:0003077,4.14e-10,72;UBERON:0007285,4.14e-10,72;UBERON:0002329,7.55e-10,71;UBERON:0003059,7.55e-10,71;UBERON:0007282,7.55e-10,71;UBERON:0004290,7.55e-10,71;UBERON:0009618,7.55e-10,71;UBERON:0007503,1.05e-09,78;UBERON:0010371,2.08e-09,104;UBERON:0003102,3.81e-09,99;UBERON:0001134,1.49e-08,62;UBERON:0002036,1.49e-08,62;UBERON:0003082,1.49e-08,62;UBERON:0003075,1.77e-08,82;UBERON:0007284,1.77e-08,82;UBERON:0005423,3.90e-08,581;UBERON:0002385,8.37e-08,64;UBERON:0001015,8.37e-08,64;UBERON:0000383,8.37e-08,64;UBERON:0002050,1.09e-07,564;UBERON:0000922,1.13e-07,592;UBERON:0003104,1.17e-07,160;UBERON:0009142,1.17e-07,160;UBERON:0001017,1.87e-07,81;UBERON:0003056,2.46e-07,61;UBERON:0002346,2.91e-07,86;UBERON:0000923,3.38e-07,560;UBERON:0010316,3.38e-07,560;UBERON:0005291,3.38e-07,560;UBERON:0006598,3.38e-07,560;UBERON:0010317,3.38e-07,560;UBERON:0002532,3.38e-07,560;UBERON:0005256,5.58e-07,122 | |||
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| ||
|short_description=p6@GPC1 | |||
}} | }} |
Latest revision as of 07:22, 16 September 2015
Short description: | p6@GPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GPC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -39bp_to_ENST00000264039_5end |
EntrezGene: | GPC1 |
HGNC: | 4449 |
UniProt: | P35052 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.89e-12 | 250 |
electrically responsive cell | 4.58e-09 | 61 |
electrically active cell | 4.58e-09 | 61 |
ectodermal cell | 8.65e-09 | 72 |
muscle precursor cell | 8.10e-08 | 58 |
myoblast | 8.10e-08 | 58 |
multi-potent skeletal muscle stem cell | 8.10e-08 | 58 |
ecto-epithelial cell | 9.52e-08 | 34 |
muscle cell | 1.24e-07 | 55 |