FFCP PHASE1:Hg19::chr2:48010276..48010307,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:48010276..48010307,+ to FFCP PHASE1:Hg19::chr2:48010276..48010307,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2956 | |EntrezGene=2956 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7329 | |HGNC=7329 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000493177_5end | |||
|cluster_id=chr2:48010276..48010307,+ | |||
|coexpression_cluster_id=C4236 | |||
|description=CAGE_peak_1_at_MSH6_5end | |||
|id=chr2:48010276..48010307,+ | |||
|ontology_enrichment_celltype=CL:0002319!4.83e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002319;5.01e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.83e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.01e-08;29 | |||
|ontology_enrichment_disease=DOID:162!6.96e-47!235;DOID:14566!6.76e-45!239;DOID:0050687!4.97e-28!143;DOID:305!3.31e-22!106;DOID:0050686!1.95e-20!137;DOID:2531!2.65e-11!51;DOID:0060083!2.65e-11!51;DOID:1240!1.30e-09!39;DOID:8692!1.88e-09!31;DOID:7!5.98e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.71e-09;31!DOID:1240;9.58e-08;39!DOID:2531;1.84e-07;51!DOID:0060083;1.84e-07;51!DOID:305;4.55e-07;106!DOID:14566;6.04e-07;239!DOID:0050687;8.34e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.96e-47,235;DOID:14566,6.76e-45,239;DOID:0050687,4.97e-28,143;DOID:305,3.31e-22,106;DOID:0050686,1.95e-20,137;DOID:2531,2.65e-11,51;DOID:0060083,2.65e-11,51;DOID:1240,1.30e-09,39;DOID:8692,1.88e-09,31;DOID:7,5.98e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@MSH6 | |||
}} | }} |
Latest revision as of 12:26, 17 September 2015
Short description: | p1@MSH6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MSH6_5end |
Coexpression cluster: | C4236_retinoblastoma_iPS_small_testicular_HES3GFP_teratocarcinoma_rhabdomyosarcoma |
Association with transcript: | -1bp_to_ENST00000493177_5end |
EntrezGene: | MSH6 |
HGNC: | 7329 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.83e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.96e-47 | 235 |
disease of cellular proliferation | 6.76e-45 | 239 |
cell type cancer | 4.97e-28 | 143 |
carcinoma | 3.31e-22 | 106 |
organ system cancer | 1.95e-20 | 137 |
hematologic cancer | 2.65e-11 | 51 |
immune system cancer | 2.65e-11 | 51 |
leukemia | 1.30e-09 | 39 |
myeloid leukemia | 1.88e-09 | 31 |
disease of anatomical entity | 5.98e-07 | 39 |