FFCP PHASE1:Hg19::chr2:68290106..68290146,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:68290106..68290146,- to FFCP PHASE1:Hg19::chr2:68290106..68290146,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10438 | |EntrezGene=10438 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29911 | |HGNC=29911 | ||
|TSSclassifier=strong | |||
|UniProt=Q13901 | |UniProt=Q13901 | ||
|association_with_transcript=0bp_to_ENST00000355848,ENST00000407324,ENST00000409302,ENST00000485709_5end | |||
|cluster_id=chr2:68290106..68290146,- | |||
|description=CAGE_peak_1_at_C1D_5end | |||
|id=chr2:68290106..68290146,- | |||
|ontology_enrichment_celltype=CL:0000738!2.04e-23!140;CL:0002031!5.94e-22!124;CL:0002032!1.47e-20!165;CL:0000837!1.47e-20!165;CL:0000037!1.57e-20!172;CL:0000566!1.57e-20!172;CL:0000988!1.23e-19!182;CL:0002087!5.30e-19!119;CL:0000766!1.64e-13!76;CL:0000839!1.98e-12!70;CL:0002057!1.98e-11!42;CL:0000763!4.90e-11!112;CL:0000049!4.90e-11!112;CL:0000557!7.03e-11!71;CL:0000860!1.70e-10!45;CL:0000134!5.52e-10!358;CL:0002009!5.57e-10!65;CL:0000542!6.22e-10!53;CL:0000051!6.22e-10!53;CL:0002194!8.87e-10!63;CL:0000576!8.87e-10!63;CL:0000040!8.87e-10!63;CL:0000559!8.87e-10!63;CL:0000838!1.21e-09!52;CL:0002320!5.25e-09!365;CL:0000219!1.28e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.10e-08;33!CL:0002057;4.10e-08;33!CL:0000576;9.27e-08;48!CL:0002087;4.33e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.35e-24,136;CL:0002031,3.42e-23,120;CL:0002032,1.64e-21,161;CL:0000837,1.64e-21,161;CL:0000037,1.88e-21,168;CL:0000988,3.98e-21,177;CL:0002087,3.80e-20,115;CL:0000766,9.29e-15,72;CL:0000839,1.13e-13,66;CL:0000557,5.48e-12,67;CL:0000763,7.86e-12,108;CL:0000049,7.86e-12,108;CL:0000860,1.98e-11,42;CL:0002057,1.98e-11,42;CL:0002009,4.43e-11,61;CL:0002194,6.91e-11,59;CL:0000576,6.91e-11,59;CL:0000040,6.91e-11,59;CL:0000559,6.91e-11,59;CL:0000473,1.46e-10,48;CL:0000234,1.46e-10,48;CL:0000134,1.78e-10,354;CL:0000542,6.22e-10,53;CL:0000051,6.22e-10,53;CL:0000838,1.21e-09,52;CL:0002320,1.83e-09,361;CL:0000219,4.67e-09,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.02e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.36e-13!102;UBERON:0003061!7.36e-13!102;UBERON:0002193!8.78e-11!112;UBERON:0002371!7.04e-09!80;UBERON:0002384!2.68e-08!375;UBERON:0001474!4.26e-08!86;UBERON:0004765!8.30e-08!101;UBERON:0001434!8.30e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.14e-14,98;UBERON:0003061,8.14e-14,98;UBERON:0002193,1.47e-11,108;UBERON:0002371,9.85e-10,76;UBERON:0001474,7.58e-09,82;UBERON:0002384,9.93e-09,371;UBERON:0004765,3.96e-08,90;UBERON:0002405,5.77e-08,93;UBERON:0001434,9.48e-08,100 | |||
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| ||
|short_description=p1@C1D | |||
}} | }} |
Latest revision as of 01:54, 18 September 2015
Short description: | p1@C1D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C1D_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000355848, ENST00000407324, ENST00000409302, ENST00000485709_5end |
EntrezGene: | C1D |
HGNC: | 29911 |
UniProt: | Q13901 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.35e-24 | 136 |
hematopoietic lineage restricted progenitor cell | 3.42e-23 | 120 |
hematopoietic oligopotent progenitor cell | 1.64e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-21 | 161 |
hematopoietic stem cell | 1.88e-21 | 168 |
hematopoietic cell | 3.98e-21 | 177 |
nongranular leukocyte | 3.80e-20 | 115 |
myeloid leukocyte | 9.29e-15 | 72 |
myeloid lineage restricted progenitor cell | 1.13e-13 | 66 |
granulocyte monocyte progenitor cell | 5.48e-12 | 67 |
myeloid cell | 7.86e-12 | 108 |
common myeloid progenitor | 7.86e-12 | 108 |
classical monocyte | 1.98e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.98e-11 | 42 |
macrophage dendritic cell progenitor | 4.43e-11 | 61 |
monopoietic cell | 6.91e-11 | 59 |
monocyte | 6.91e-11 | 59 |
monoblast | 6.91e-11 | 59 |
promonocyte | 6.91e-11 | 59 |
defensive cell | 1.46e-10 | 48 |
phagocyte | 1.46e-10 | 48 |
mesenchymal cell | 1.78e-10 | 354 |
lymphocyte | 6.22e-10 | 53 |
common lymphoid progenitor | 6.22e-10 | 53 |
lymphoid lineage restricted progenitor cell | 1.21e-09 | 52 |
connective tissue cell | 1.83e-09 | 361 |
motile cell | 4.67e-09 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.14e-14 | 98 |
blood island | 8.14e-14 | 98 |
hemolymphoid system | 1.47e-11 | 108 |
bone marrow | 9.85e-10 | 76 |
bone element | 7.58e-09 | 82 |
connective tissue | 9.93e-09 | 371 |
skeletal element | 3.96e-08 | 90 |
immune system | 5.77e-08 | 93 |
skeletal system | 9.48e-08 | 100 |