FFCP PHASE1:Hg19::chr2:73316776..73316815,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:73316776..73316815,- to FFCP PHASE1:Hg19::chr2:73316776..73316815,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26056 | |EntrezGene=26056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24845 | |HGNC=24845 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000493523,uc002sit.3_5end | |||
|cluster_id=chr2:73316776..73316815,- | |||
|description=CAGE_peak_4_at_RAB11FIP5_5end | |||
|id=chr2:73316776..73316815,- | |||
|ontology_enrichment_celltype=CL:0000055!9.47e-24!180;CL:0000192!4.27e-17!42;CL:0000514!4.27e-17!42;CL:0000183!2.52e-15!59;CL:0000680!5.98e-15!57;CL:0000056!5.98e-15!57;CL:0000355!5.98e-15!57;CL:0000187!2.77e-14!54;CL:0000359!3.02e-14!32;CL:0000057!5.78e-13!75;CL:0000220!1.63e-12!246;CL:0002321!4.10e-12!248;CL:0000393!2.98e-11!60;CL:0000211!2.98e-11!60;CL:0000144!3.48e-11!625;CL:0000222!7.05e-11!119;CL:0002371!1.56e-10!591;CL:0000548!1.14e-08!679;CL:0000004!1.14e-08!679;CL:0000255!1.14e-08!679;CL:0000012!2.74e-08!682 | |||
|ontology_enrichment_celltype_v019=CL:0000349;8.19e-15;19!CL:0000359;1.16e-13;32!CL:0000192;8.63e-11;43!CL:0002577;2.33e-07;3!CL:0002620;3.33e-07;23!CL:0002537;7.29e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.89e-15,32;CL:0000349,8.41e-15,19;CL:0000192,7.69e-14,43;CL:0000514,7.69e-14,43;CL:0000187,1.57e-09,55;CL:0000680,9.49e-09,58;CL:0000056,9.49e-09,58;CL:0000355,9.49e-09,58;CL:0000393,4.75e-08,61;CL:0000211,4.75e-08,61;CL:0002577,2.37e-07,3;CL:0002620,2.78e-07,23;CL:0000057,3.24e-07,76 | |||
|ontology_enrichment_development_v019=CL:0000514;8.63e-11;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.49e-15!83;UBERON:0002329!1.49e-15!83;UBERON:0003077!1.49e-15!83;UBERON:0003059!1.49e-15!83;UBERON:0007282!1.49e-15!83;UBERON:0009618!1.49e-15!83;UBERON:0007285!1.49e-15!83;UBERON:0001134!1.02e-14!61;UBERON:0002036!1.02e-14!61;UBERON:0003082!1.02e-14!61;UBERON:0002385!1.11e-13!63;UBERON:0001015!1.11e-13!63;UBERON:0000383!1.11e-13!63;UBERON:0000486!1.44e-13!82;UBERON:0004290!9.86e-13!70;UBERON:0004872!1.18e-12!84;UBERON:0001637!2.46e-12!42;UBERON:0003509!2.46e-12!42;UBERON:0004572!2.46e-12!42;UBERON:0002049!1.89e-11!79;UBERON:0007798!1.89e-11!79;UBERON:0001981!2.45e-11!60;UBERON:0007500!2.45e-11!60;UBERON:0004537!2.45e-11!60;UBERON:0006965!2.45e-11!60;UBERON:0005631!2.74e-11!14;UBERON:0000158!2.74e-11!14;UBERON:0005256!2.82e-11!143;UBERON:0000475!5.24e-10!365;UBERON:0000055!7.71e-10!69;UBERON:0000490!9.73e-10!138;UBERON:0003914!5.14e-09!118;UBERON:0002100!5.62e-09!216;UBERON:0000119!6.47e-09!312;UBERON:0000483!8.25e-09!309;UBERON:0004573!1.60e-08!33;UBERON:0004571!1.60e-08!33;UBERON:0004923!4.02e-08!57;UBERON:0001009!9.01e-08!113;UBERON:0000478!9.75e-08!24;UBERON:0004535!1.27e-07!110;UBERON:0002097!2.77e-07!40;UBERON:0003104!3.63e-07!238;UBERON:0009142!3.63e-07!238;UBERON:0000481!7.40e-07!347;UBERON:0000468!9.14e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;5.01e-13;24!UBERON:0005631;8.45e-12;10!UBERON:0000158;8.45e-12;10!UBERON:0000305;7.04e-10;7!UBERON:0001987;2.81e-09;4!UBERON:0001637;2.77e-08;42!UBERON:0003509;2.77e-08;42!UBERON:0004572;2.77e-08;42!UBERON:0004573;3.57e-08;33!UBERON:0004571;3.57e-08;33!UBERON:0007500;1.56e-07;56!UBERON:0001981;1.56e-07;56!UBERON:0004537;1.56e-07;56!UBERON:0002097;5.33e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,5.97e-19,14;UBERON:0000158,5.97e-19,14;UBERON:0004872,2.26e-13,83;UBERON:0000478,5.13e-13,24;UBERON:0007500,7.02e-12,59;UBERON:0001981,7.02e-12,59;UBERON:0004537,7.02e-12,59;UBERON:0006965,7.02e-12,59;UBERON:0001637,1.11e-11,42;UBERON:0003509,1.11e-11,42;UBERON:0004572,1.11e-11,42;UBERON:0003124,9.79e-11,7;UBERON:0000055,1.64e-10,68;UBERON:0000305,7.19e-10,7;UBERON:0004573,1.04e-09,33;UBERON:0004571,1.04e-09,33;UBERON:0001987,2.88e-09,4;UBERON:0004340,2.88e-09,4;UBERON:0002049,4.02e-09,78;UBERON:0007798,4.02e-09,78;UBERON:0001134,1.13e-08,62;UBERON:0002036,1.13e-08,62;UBERON:0003082,1.13e-08,62;UBERON:0004871,1.64e-08,8;UBERON:0002385,3.17e-08,64;UBERON:0001015,3.17e-08,64;UBERON:0000383,3.17e-08,64;UBERON:0002097,3.21e-08,41;UBERON:0002329,1.11e-07,71;UBERON:0003059,1.11e-07,71;UBERON:0007282,1.11e-07,71;UBERON:0004290,1.11e-07,71;UBERON:0009618,1.11e-07,71;UBERON:0003077,1.71e-07,72;UBERON:0007285,1.71e-07,72;UBERON:0007524,2.60e-07,73;UBERON:0007503,3.17e-07,78;UBERON:0002199,7.01e-07,46;UBERON:0002416,7.01e-07,46;UBERON:0003914,7.55e-07,117 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0.893922188854576,0,0,0,0,0,0,1.74753097704138,3.69273769519835,1.8564952944007,0.994192127183747,0,0.602694528023977,0.730310090387373,1.46379839637152,0.738726348460727,1.83600622119828,1.25381888591235,0,0.684372125364421,0.502170558379211,0,0,0,0,0,0,2.75826367343678,1.8072355126695,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,1.50401373190767,0.724232594804119,0,1.45990461090791,0.567208902984407,0.886917589850256,1.31752178539689,0.327447688744282,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0.275118041940067,0.835979866147242,0.258416759169329,0,0,2.41697590265488,0.760272105718513,1.46437234528902,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0.496971951695318,1.39293562831038,0.794455084879313,2.0078563452417,0.354668382198357,1.68203280042692,3.20246987189115,1.2333377420858,0,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0.247266929278557,0,2.87447256726495,0.168336113954066,0.250237039743928,0.554128230968366,0.877955241761676,0.612975591598039,0,0.794025282120147,3.40840307808838,1.92201649936711,0.423863802319124,2.10063767259082,1.33968288009971,0.257640540045629,1.30281799432113,2.53164498361899,1.46155507741798,3.5340728394176,0.552299391853796,0.646584227275248,3.19508633264953,1.81353776809752,1.18692414617341,0.773043412653187,0.818238361772504,0.573609190778008,0,0,0,0,0.252320850875628,0,1.56449532329816,0.643240938192885,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,3.7041661019826,2.94017422771084,0,0,0,0,0.368965315629341,0.171567810298526,1.09750285408626,2.24803506515239,0.603173834469785,0,0.325808305310325,0,0,0,0.70445216541493,0.433099343283221,0,0,0,0,0,0,0,0.93733833986777,1.6798212819886,0.425325291727159,0.358234090811393,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.336393253036082,0,0.22001485746285,0.517086863031111,0,0,0.531876233169741,1.04007436911366,0.257207374262142,0,0.532844358032199,0.428933980974443,0.542621605391443,0,0,0,0,2.1100756394171,0.871533458600294,6.39827143565165,0,0,0,1.91699884393266,1.14861935834114,0,0.434343920002738,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,1.00034104211935,0.542530047399471,0.207970861530807,1.07057393278297,0.630809660135739,0.819989904948992,3.31040709700491,0,0,0,2.58116835958384,1.04260337361699,0.195801157462741,0.343143423810856,0,0,0,6.66880657181771,9.98612637062982,6.35019615992329,0.744323423456331,0.460385919864187,0.561320188866147,0.512556597022804,0,0.64341568457443,0,0.616838775210622,0.710246901252508,0.164254312027618,1.55776328755086,0.348631135379878,0,0.802025881213139,0.276242966807689,0.114814448164607,0.546273504020151,0.524497659837696,0.451199612907412,0.0770153371044148,0,1.46139224653261,0.527758144464379,0,0.170093705276516,0.215915916102139,0,0.270946437543853,1.50506932156456,0,0,0.671624264166535,0,0,0.769350375349168,4.26419039409617,1.95227036798582,1.54561517471583,0.0915694648183434,0,2.29706215198469,1.30012049207304,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0.534192213880424,0.495854746082934,0.192190067365106,1.14851441245126,0.10115778085555,1.39453664789186,0.62962469366128,1.3940745403212,1.23213432070436,3.72614221221915,1.73986598415015,1.29726953372744,1.5743737541619,0.372158369359667,0.632758849437452,0.953150969619124,1.02359116524534,0.42793898803392,0.95460974377781,0,0.539617372749944,0.823611089208164,0.942499218765491,1.41527737101321,0,0.421258456238981,3.41343617362713,1.21856744815642,2.11300293513511,0.409499734223957,0,3.39024349860728,0.551365343546124,2.65375590096488,2.63070531152258,0.578775534266688,1.31178950409327,1.21746226177622,2.78841148289775,0.563391205064483,1.14729081763241,2.75097314836739,2.1400263088875,0.354761064070598,0.422215270595328,0,0,0.699869440489966,0.48111056362756,2.68120910214315,0,1.03558180854457,0.86101074534246,0,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,15.5183915079499,5.93929361665277,15.0508744028624,0,0,0.111308705022906,0,0,3.18796781201712,0.276283915531148,0,0.920418142519393,0,0.933118762985422,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.384751292518985,0.227884111694002,0,0.0897576444097721,0.217294743844016,6.38002319463839,0.274792780205587,2.13213910407454,0,0,0,0,0,0,0,0,0,0.652931232636591,0.282706142867882,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0.242780379534093,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0.832048038078832,0.347119476670262,0,0.0870592065804026,0,3.7836927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| ||
|short_description=p4@RAB11FIP5 | |||
}} | }} |
Latest revision as of 09:08, 18 September 2015
Short description: | p4@RAB11FIP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RAB11FIP5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000493523, uc002sit.3_5end |
EntrezGene: | RAB11FIP5 |
HGNC: | 24845 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.89e-15 | 32 |
extraembryonic cell | 8.41e-15 | 19 |
smooth muscle cell | 7.69e-14 | 43 |
smooth muscle myoblast | 7.69e-14 | 43 |
muscle cell | 1.57e-09 | 55 |
muscle precursor cell | 9.49e-09 | 58 |
myoblast | 9.49e-09 | 58 |
multi-potent skeletal muscle stem cell | 9.49e-09 | 58 |
electrically responsive cell | 4.75e-08 | 61 |
electrically active cell | 4.75e-08 | 61 |
placental epithelial cell | 2.37e-07 | 3 |
skin fibroblast | 2.78e-07 | 23 |
fibroblast | 3.24e-07 | 76 |