FFCP PHASE1:Hg19::chr2:9563319..9563355,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:9563319..9563355,- to FFCP PHASE1:Hg19::chr2:9563319..9563355,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9270 | |EntrezGene=9270 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23927 | |HGNC=23927 | ||
|TSSclassifier=strong | |||
|UniProt=C9IZZ8 | |UniProt=C9IZZ8 | ||
|association_with_transcript=1bp_to_ENST00000497105_5end | |||
|cluster_id=chr2:9563319..9563355,- | |||
|description=CAGE_peak_3_at_ITGB1BP1_5end | |||
|id=chr2:9563319..9563355,- | |||
|ontology_enrichment_celltype=CL:0000055!1.10e-09!180;CL:0000680!1.29e-07!57;CL:0000056!1.29e-07!57;CL:0000355!1.29e-07!57;CL:0000136!1.31e-07!15;CL:0000057!2.62e-07!75;CL:0000187!2.87e-07!54;CL:0000183!8.45e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.45e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.12e-07,76;CL:0000136,1.26e-07,15;CL:0000680,2.18e-07,58;CL:0000056,2.18e-07,58;CL:0000355,2.18e-07,58;CL:0000187,4.86e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.78e-12!365;UBERON:0000914!1.08e-11!83;UBERON:0002329!1.08e-11!83;UBERON:0003077!1.08e-11!83;UBERON:0003059!1.08e-11!83;UBERON:0007282!1.08e-11!83;UBERON:0009618!1.08e-11!83;UBERON:0007285!1.08e-11!83;UBERON:0004290!2.33e-09!70;UBERON:0000486!1.83e-08!82;UBERON:0005256!3.51e-08!143;UBERON:0002100!1.03e-07!216;UBERON:0001134!1.91e-07!61;UBERON:0002036!1.91e-07!61;UBERON:0003082!1.91e-07!61;UBERON:0000481!2.48e-07!347;UBERON:0002385!3.73e-07!63;UBERON:0001015!3.73e-07!63;UBERON:0000383!3.73e-07!63;UBERON:0000119!3.97e-07!312;UBERON:0000483!4.58e-07!309 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.10e-09,73;UBERON:0003077,2.58e-09,72;UBERON:0007285,2.58e-09,72;UBERON:0002329,3.95e-09,71;UBERON:0003059,3.95e-09,71;UBERON:0007282,3.95e-09,71;UBERON:0004290,3.95e-09,71;UBERON:0009618,3.95e-09,71;UBERON:0000486,2.88e-08,83;UBERON:0007503,1.99e-07,78;UBERON:0001134,3.11e-07,62;UBERON:0002036,3.11e-07,62;UBERON:0003082,3.11e-07,62;UBERON:0002385,5.92e-07,64;UBERON:0001015,5.92e-07,64;UBERON:0000383,5.92e-07,64;UBERON:0000119,9.70e-07,309 | |||
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| ||
|short_description=p3@ITGB1BP1 | |||
}} | }} |
Latest revision as of 22:57, 18 September 2015
Short description: | p3@ITGB1BP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ITGB1BP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000497105_5end |
EntrezGene: | ITGB1BP1 |
HGNC: | 23927 |
UniProt: | C9IZZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.12e-07 | 76 |
fat cell | 1.26e-07 | 15 |
muscle precursor cell | 2.18e-07 | 58 |
myoblast | 2.18e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.18e-07 | 58 |
muscle cell | 4.86e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.10e-09 | 73 |
paraxial mesoderm | 2.58e-09 | 72 |
presumptive paraxial mesoderm | 2.58e-09 | 72 |
somite | 3.95e-09 | 71 |
presomitic mesoderm | 3.95e-09 | 71 |
presumptive segmental plate | 3.95e-09 | 71 |
dermomyotome | 3.95e-09 | 71 |
trunk paraxial mesoderm | 3.95e-09 | 71 |
multilaminar epithelium | 2.88e-08 | 83 |
epithelial vesicle | 1.99e-07 | 78 |
skeletal muscle tissue | 3.11e-07 | 62 |
striated muscle tissue | 3.11e-07 | 62 |
myotome | 3.11e-07 | 62 |
muscle tissue | 5.92e-07 | 64 |
musculature | 5.92e-07 | 64 |
musculature of body | 5.92e-07 | 64 |
cell layer | 9.70e-07 | 309 |