FFCP PHASE1:Hg19::chr3:1134400..1134417,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:1134400..1134417,+ to FFCP PHASE1:Hg19::chr3:1134400..1134417,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27255 | |EntrezGene=27255 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2176 | |HGNC=2176 | ||
|TSSclassifier=strong | |||
|UniProt=F8VWS7 | |UniProt=F8VWS7 | ||
|association_with_transcript=0bp_to_ENST00000413210_5end | |||
|cluster_id=chr3:1134400..1134417,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_3_at_CNTN6_5end | |||
|id=chr3:1134400..1134417,+ | |||
|ontology_enrichment_celltype=CL:0000306!5.13e-07!4;CL:0002222!5.13e-07!4;CL:0002224!5.13e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000306;2.13e-11;4!CL:0002222;2.13e-11;4!CL:0002224;2.13e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,3.07e-11,4;CL:0002222,3.07e-11,4;CL:0002224,3.07e-11,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.20e-32;3!UBERON:0006222;8.62e-12;1!UBERON:0006601;1.14e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;2.62e-12;1!DOID:4549;2.62e-12;1!DOID:5861;2.62e-12;1!DOID:6496;2.62e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.63e-12,1;DOID:4549,2.63e-12,1;DOID:5861,2.63e-12,1;DOID:6496,2.63e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.25e-62!57;UBERON:0005068!1.25e-62!57;UBERON:0006241!1.25e-62!57;UBERON:0007135!1.25e-62!57;UBERON:0003075!1.42e-55!86;UBERON:0007284!1.42e-55!86;UBERON:0002616!1.54e-53!59;UBERON:0002346!1.36e-52!90;UBERON:0001017!7.01e-50!82;UBERON:0005743!1.39e-49!86;UBERON:0000955!2.97e-49!69;UBERON:0006238!2.97e-49!69;UBERON:0000073!2.39e-46!94;UBERON:0001016!2.39e-46!94;UBERON:0002780!4.45e-46!41;UBERON:0001890!4.45e-46!41;UBERON:0006240!4.45e-46!41;UBERON:0001950!3.82e-45!20;UBERON:0003080!8.11e-45!42;UBERON:0003056!7.67e-44!61;UBERON:0001893!9.12e-41!34;UBERON:0002619!9.57e-41!22;UBERON:0001869!4.04e-40!32;UBERON:0002791!2.16e-38!33;UBERON:0002020!2.67e-37!34;UBERON:0003528!2.67e-37!34;UBERON:0000033!7.48e-37!123;UBERON:0000153!2.68e-36!129;UBERON:0007811!2.68e-36!129;UBERON:0000956!2.03e-35!25;UBERON:0000203!2.03e-35!25;UBERON:0007023!7.86e-33!115;UBERON:0004121!4.75e-29!169;UBERON:0000924!4.27e-28!173;UBERON:0006601!4.27e-28!173;UBERON:0003076!3.08e-18!15;UBERON:0003057!3.08e-18!15;UBERON:0000200!2.17e-17!6;UBERON:0001871!8.52e-17!7;UBERON:0004733!3.03e-15!12;UBERON:0002028!3.03e-15!12;UBERON:0007277!3.03e-15!12;UBERON:0001872!5.99e-15!5;UBERON:0004732!6.00e-14!13;UBERON:0000025!3.14e-12!194;UBERON:0000483!7.75e-12!309;UBERON:0000119!1.33e-11!312;UBERON:0001896!6.14e-10!3;UBERON:0005290!6.14e-10!3;UBERON:0010096!6.14e-10!3;UBERON:0000064!1.34e-09!219;UBERON:0002771!2.45e-09!3;UBERON:0002298!2.81e-09!8;UBERON:0002021!6.95e-09!5;UBERON:0000475!9.19e-09!365;UBERON:0000477!1.17e-08!286;UBERON:0002680!2.21e-08!9;UBERON:0001895!2.21e-08!9;UBERON:0010092!2.21e-08!9;UBERON:0004111!5.06e-08!241;UBERON:0000481!6.10e-08!347;UBERON:0002420!1.99e-07!9;UBERON:0007245!1.99e-07!9;UBERON:0010009!1.99e-07!9;UBERON:0010011!1.99e-07!9;UBERON:0000454!1.99e-07!9;UBERON:0001870!3.17e-07!2;UBERON:0010077!5.13e-07!4;UBERON:0005389!5.13e-07!4;UBERON:0000484!5.13e-07!4;UBERON:0002546!5.13e-07!4;UBERON:0000965!5.13e-07!4;UBERON:0001803!5.13e-07!4;UBERON:0003073!5.13e-07!4;UBERON:0005426!5.13e-07!4;UBERON:0001894!8.51e-07!7;UBERON:0006222!8.51e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;3.35e-42;12!UBERON:0002028;3.35e-42;12!UBERON:0004732;6.42e-39;13!UBERON:0001896;8.58e-32;3!UBERON:0005290;8.58e-32;3!UBERON:0002298;5.41e-28;6!UBERON:0000073;2.91e-27;53!UBERON:0002616;2.91e-27;53!UBERON:0001950;1.29e-23;20!UBERON:0002619;1.63e-21;22!UBERON:0002680;3.74e-19;9!UBERON:0001895;3.74e-19;9!UBERON:0000956;5.76e-19;25!UBERON:0000203;5.76e-19;25!UBERON:0000955;5.26e-17;68!UBERON:0002037;1.15e-16;6!UBERON:0001870;7.01e-15;3!UBERON:0003528;2.57e-14;34!UBERON:0002020;2.57e-14;34!UBERON:0001869;1.80e-13;32!UBERON:0001893;2.11e-13;34!UBERON:0001017;9.22e-13;75!UBERON:0002791;1.07e-12;32!UBERON:0002022;8.62e-12;1!UBERON:0001016;1.44e-11;83!UBERON:0010077;2.13e-11;4!UBERON:0005389;2.13e-11;4!UBERON:0000484;2.13e-11;4!UBERON:0000965;2.13e-11;4!UBERON:0001803;2.13e-11;4!UBERON:0002780;1.89e-09;41!UBERON:0001890;1.89e-09;41!UBERON:0001872;2.68e-09;5!UBERON:0000200;6.83e-08;6!UBERON:0001871;6.98e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,3.94e-42,12;UBERON:0002028,3.94e-42,12;UBERON:0007277,3.94e-42,12;UBERON:0000073,2.17e-41,53;UBERON:0002616,2.17e-41,53;UBERON:0001049,4.16e-39,56;UBERON:0005068,4.16e-39,56;UBERON:0006241,4.16e-39,56;UBERON:0007135,4.16e-39,56;UBERON:0004732,7.44e-39,13;UBERON:0003075,5.21e-34,82;UBERON:0007284,5.21e-34,82;UBERON:0003076,1.31e-33,15;UBERON:0003057,1.31e-33,15;UBERON:0002346,2.41e-32,86;UBERON:0001896,1.62e-31,3;UBERON:0005290,1.62e-31,3;UBERON:0010096,1.62e-31,3;UBERON:0000955,1.80e-31,68;UBERON:0006238,1.80e-31,68;UBERON:0002298,8.26e-28,6;UBERON:0010371,2.03e-26,104;UBERON:0001017,3.22e-26,81;UBERON:0001950,1.09e-23,20;UBERON:0001016,1.89e-23,89;UBERON:0002619,1.40e-21,22;UBERON:0010314,2.23e-20,132;UBERON:0002680,3.18e-19,9;UBERON:0001895,3.18e-19,9;UBERON:0010092,3.18e-19,9;UBERON:0000956,5.03e-19,25;UBERON:0000203,5.03e-19,25;UBERON:0002037,9.55e-17,6;UBERON:0006215,9.55e-17,6;UBERON:0007023,6.11e-16,114;UBERON:0003056,1.96e-15,61;UBERON:0002780,4.88e-15,41;UBERON:0001890,4.88e-15,41;UBERON:0003080,4.88e-15,41;UBERON:0006240,4.88e-15,41;UBERON:0004121,5.07e-15,171;UBERON:0000924,5.07e-15,171;UBERON:0006601,5.07e-15,171;UBERON:0001870,7.02e-15,3;UBERON:0002791,7.34e-15,32;UBERON:0001869,7.34e-15,32;UBERON:0003528,5.63e-14,34;UBERON:0002020,5.63e-14,34;UBERON:0001893,5.63e-14,34;UBERON:0002022,9.61e-12,1;UBERON:0010077,3.07e-11,4;UBERON:0005389,3.07e-11,4;UBERON:0000484,3.07e-11,4;UBERON:0002546,3.07e-11,4;UBERON:0000965,3.07e-11,4;UBERON:0001803,3.07e-11,4;UBERON:0003073,3.07e-11,4;UBERON:0005426,3.07e-11,4;UBERON:0000025,5.05e-10,192;UBERON:0001872,1.76e-09,5;UBERON:0011216,3.55e-08,223;UBERON:0000200,4.99e-08,6;UBERON:0004111,1.45e-07,240;UBERON:0000483,1.98e-07,306;UBERON:0000119,2.47e-07,309;UBERON:0001871,7.86e-07,6 | |||
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| ||
|short_description=p3@CNTN6 | |||
}} | }} |
Latest revision as of 15:59, 19 September 2015
Short description: | p3@CNTN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CNTN6_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 0bp_to_ENST00000413210_5end |
EntrezGene: | CNTN6 |
HGNC: | 2176 |
UniProt: | F8VWS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 3.07e-11 | 4 |
vertebrate lens cell | 3.07e-11 | 4 |
lens epithelial cell | 3.07e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.63e-12 | 1 |
extraosseous chondrosarcoma | 2.63e-12 | 1 |
myxoid chondrosarcoma | 2.63e-12 | 1 |
extraskeletal myxoid chondrosarcoma | 2.63e-12 | 1 |