FFCP PHASE1:Hg19::chr3:118892362..118892373,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:118892362..118892373,+ to FFCP PHASE1:Hg19::chr3:118892362..118892373,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7348 | |EntrezGene=7348 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12578 | |HGNC=12578 | ||
|TSSclassifier=strong | |||
|UniProt=O75841,E7ETN9 | |UniProt=O75841,E7ETN9 | ||
|association_with_transcript=0bp_to_ENST00000264234,ENST00000497685_5end | |||
|cluster_id=chr3:118892362..118892373,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_2_at_UPK1B_5end | |||
|id=chr3:118892362..118892373,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.11e-12!254;CL:0000622!1.94e-09!5;CL:0002076!7.44e-09!43;CL:0000244!2.43e-08!4;CL:0000731!2.43e-08!4;CL:0000154!8.91e-08!6;CL:0000223!1.24e-07!59;CL:0000150!3.13e-07!9;CL:1000507!3.30e-07!12;CL:1000494!3.30e-07!12;CL:0000349!3.85e-07!3;CL:0002577!3.85e-07!3;CL:0000077!8.52e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000349;6.54e-26;19!CL:0002577;4.40e-16;3!CL:1000507;4.92e-12;10!CL:1000494;4.92e-12;10!CL:0002536;2.78e-11;2!CL:0000575;5.00e-11;2!CL:0000650;1.51e-10;2!CL:1000500;1.51e-10;2!CL:1000618;1.51e-10;2!CL:1001318;1.51e-10;2!CL:0002173;1.51e-10;2!CL:0002537;2.13e-10;5!CL:0002541;3.72e-08;3!CL:1000449;6.02e-08;15!CL:0002623;1.80e-07;3!CL:1000497;5.54e-07;17!CL:0002518;5.54e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.51e-26,19;CL:0002577,3.98e-16,3;CL:1000507,6.11e-12,10;CL:1000494,6.11e-12,10;CL:0002536,2.44e-11,2;CL:0000575,4.76e-11,2;CL:0002537,2.10e-10,5;CL:0000650,2.35e-10,2;CL:1000500,2.35e-10,2;CL:1000618,2.35e-10,2;CL:1001318,2.35e-10,2;CL:0002173,2.35e-10,2;CL:0002541,3.53e-08,3;CL:1000449,6.92e-08,15;CL:0000066,9.60e-08,253;CL:0002623,2.06e-07,3;CL:1000497,6.26e-07,17;CL:0002518,6.26e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.83e-19!14;UBERON:0000158!1.83e-19!14;UBERON:0003124!7.55e-14!7;UBERON:0000478!7.25e-12!24;UBERON:0000464!3.82e-09!104;UBERON:0001987!8.02e-09!4;UBERON:0004340!8.02e-09!4;UBERON:0006554!5.89e-08!44;UBERON:0000305!9.20e-08!7;UBERON:0002553!1.05e-07!70;UBERON:0001008!1.10e-07!45;UBERON:0009773!3.30e-07!12;UBERON:0001231!3.30e-07!12;UBERON:0004810!3.30e-07!12;UBERON:0005177!4.41e-07!107;UBERON:0004119!7.95e-07!169;UBERON:0000925!7.95e-07!169;UBERON:0006595!7.95e-07!169;UBERON:0000466!9.09e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;6.83e-29;24!UBERON:0005631;2.45e-25;10!UBERON:0000158;2.45e-25;10!UBERON:0001987;1.80e-20;4!UBERON:0000305;6.90e-19;7!UBERON:0004211;4.92e-12;10!UBERON:0009773;4.92e-12;10!UBERON:0001231;4.92e-12;10!UBERON:0004810;4.92e-12;10!UBERON:0003567;1.51e-10;2!UBERON:0003838;1.51e-10;2!UBERON:0003586;1.51e-10;2!UBERON:0005169;1.51e-10;2!UBERON:0002321;1.51e-10;2!UBERON:0005215;1.51e-10;2!UBERON:0002303;1.51e-10;2!UBERON:0002319;1.51e-10;2!UBERON:0001041;1.40e-08;14!UBERON:0003124;3.72e-08;3!UBERON:0000920;3.72e-08;3!UBERON:0001851;3.96e-08;15!UBERON:0006555;6.02e-08;15!UBERON:0004819;6.02e-08;15!UBERON:0001285;6.02e-08;15!UBERON:0007684;6.02e-08;15!UBERON:0006554;3.46e-07;30!UBERON:0001008;3.46e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.94e-43,14;UBERON:0000158,3.94e-43,14;UBERON:0000478,5.59e-29,24;UBERON:0003124,3.87e-26,7;UBERON:0001987,1.67e-20,4;UBERON:0004340,1.67e-20,4;UBERON:0000305,6.19e-19,7;UBERON:0004871,1.54e-16,8;UBERON:0004810,6.11e-12,10;UBERON:0006554,1.33e-10,47;UBERON:0003567,2.35e-10,2;UBERON:0003838,2.35e-10,2;UBERON:0003586,2.35e-10,2;UBERON:0005169,2.35e-10,2;UBERON:0002321,2.35e-10,2;UBERON:0005215,2.35e-10,2;UBERON:0002303,2.35e-10,2;UBERON:0002319,2.35e-10,2;UBERON:0001008,2.44e-10,48;UBERON:0000920,3.53e-08,3;UBERON:0001851,4.35e-08,15;UBERON:0004211,6.92e-08,15;UBERON:0009773,6.92e-08,15;UBERON:0001231,6.92e-08,15;UBERON:0001285,6.92e-08,15;UBERON:0007684,6.92e-08,15;UBERON:0004208,6.92e-08,15;UBERON:0004923,1.97e-07,66;UBERON:0006555,2.23e-07,16;UBERON:0004819,2.23e-07,16 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.982935746006035,0,4.15038607047327,2.90143676051299,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0,0,0,0,2.5500670180478,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0.329250856225877,0,0,0.277765335475589,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,9.49743416229542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,4.54691357169389,3.32870879020994,2.41912234663744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0.902399225814824,4.23584354074281,0.784349769176855,0,1.05551628892876,0,0,0.431831832204279,0,1.08378575017541,1.00337954770971,1.78413391131527,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0.384380134730212,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0.86101074534246,3.36942951335251,2.21715076768338,0.689170200620878,0,0,0,0,0,0,0,0,0,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.0735660317994,7.12715233998333,99.8272281822504,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6740533476683,0.183195186803725,7.46248686426089,0,0,0,0,0,0,0,0,0,1.79556088975062,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0,7.11594927174037,0.0979923974143777,0,0,0,0,0,0,0.193978032976839,0,0.90392296312213,0,0,0,0.977756913674015,0,0.85381197895741,0,3.45817001169854,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,2.39614800598789,0,0,0.0671834724867263,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0.521745061811734,2.25386413495828,4.18885733385675,0.406870733204662,0,1.18151612746737,0,0,0,0,0,0,0,7.07657251537255,0,0,0,0,0,15.7488738052096,0.657852148736121,0.530067437837643,3.08662461233464,0,0.512483037175893,0,0,0,0.389720617678777,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,2.34454203369928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24183318227694,0,0,0,0,0,0,0.470958557103084,0,0,0,0,0,0,0,0,0,0,0.414432328326074,2.0486217251274,1.38251932362818,0,0,0,0,0.68732060563215,0,0,1.11855431797792,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0.178553938605658,0,0,1.46067277649303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.23806443146374,0.258355639344024,0.124149428591716,0,0,0,0,0.342233301085281,0.740872583160463,0.502055437748735,1.66330178273007,0,0,0,0.179650404213174,4.69281884806909,0,0,0,0,0 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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.982935746006035,0,4.15038607047327,2.90143676051299,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0,0,0,0,2.5500670180478,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0.329250856225877,0,0,0.277765335475589,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,9.49743416229542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,4.54691357169389,3.32870879020994,2.41912234663744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0.902399225814824,4.23584354074281,0.784349769176855,0,1.05551628892876,0,0,0.431831832204279,0,1.08378575017541,1.00337954770971,1.78413391131527,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0.384380134730212,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0.86101074534246,3.36942951335251,2.21715076768338,0.689170200620878,0,0,0,0,0,0,0,0,0,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.0735660317994,7.12715233998333,99.8272281822504,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6740533476683,0.183195186803725,7.46248686426089,0,0,0,0,0,0,0,0,0,1.79556088975062,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0.284609546029793,0,7.11594927174037,0.0979923974143777,0,0,0,0,0,0,0.193978032976839,0,0.90392296312213,0,0,0,0.977756913674015,0,0.85381197895741,0,3.45817001169854,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,2.39614800598789,0,0,0.0671834724867263,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0.521745061811734,2.25386413495828,4.18885733385675,0.406870733204662,0,1.18151612746737,0,0,0,0,0,0,0,7.07657251537255,0,0,0,0,0,15.7488738052096,0.657852148736121,0.530067437837643,3.08662461233464,0,0.512483037175893,0,0,0,0.389720617678777,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,2.34454203369928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24183318227694,0,0,0,0,0,0,0.470958557103084,0,0,0,0,0,0,0,0,0,0,0.414432328326074,2.0486217251274,1.38251932362818,0,0,0,0,0.68732060563215,0,0,1.11855431797792,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0.178553938605658,0,0,1.46067277649303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.23806443146374,0.258355639344024,0.124149428591716,0,0,0,0,0.342233301085281,0.740872583160463,0.502055437748735,1.66330178273007,0,0,0,0.179650404213174,4.69281884806909,0,0,0,0,0 | ||
|short_description=p2@UPK1B | |||
}} | }} |
Latest revision as of 19:25, 19 September 2015
Short description: | p2@UPK1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UPK1B_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 0bp_to_ENST00000264234, ENST00000497685_5end |
EntrezGene: | UPK1B |
HGNC: | 12578 |
UniProt: | O75841E7ETN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.51e-26 | 19 |
placental epithelial cell | 3.98e-16 | 3 |
kidney tubule cell | 6.11e-12 | 10 |
nephron tubule epithelial cell | 6.11e-12 | 10 |
amniotic epithelial cell | 2.44e-11 | 2 |
corneal epithelial cell | 4.76e-11 | 2 |
amnion mesenchymal stem cell | 2.10e-10 | 5 |
mesangial cell | 2.35e-10 | 2 |
kidney interstitial cell | 2.35e-10 | 2 |
juxtaglomerular complex cell | 2.35e-10 | 2 |
renal interstitial pericyte | 2.35e-10 | 2 |
extraglomerular mesangial cell | 2.35e-10 | 2 |
chorionic membrane mesenchymal stem cell | 3.53e-08 | 3 |
epithelial cell of nephron | 6.92e-08 | 15 |
epithelial cell | 9.60e-08 | 253 |
acinar cell of salivary gland | 2.06e-07 | 3 |
kidney cell | 6.26e-07 | 17 |
kidney epithelial cell | 6.26e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.94e-43 | 14 |
membranous layer | 3.94e-43 | 14 |
extraembryonic structure | 5.59e-29 | 24 |
chorion | 3.87e-26 | 7 |
placenta | 1.67e-20 | 4 |
allantois | 1.67e-20 | 4 |
amnion | 6.19e-19 | 7 |
somatic layer of lateral plate mesoderm | 1.54e-16 | 8 |
nephron tubule epithelium | 6.11e-12 | 10 |
urinary system structure | 1.33e-10 | 47 |
abdomen connective tissue | 2.35e-10 | 2 |
abdominal segment connective tissue | 2.35e-10 | 2 |
trunk connective tissue | 2.35e-10 | 2 |
interstitial tissue | 2.35e-10 | 2 |
extraglomerular mesangium | 2.35e-10 | 2 |
kidney interstitium | 2.35e-10 | 2 |
juxtaglomerular apparatus | 2.35e-10 | 2 |
mesangium | 2.35e-10 | 2 |
renal system | 2.44e-10 | 48 |
egg chorion | 3.53e-08 | 3 |
cortex | 4.35e-08 | 15 |
nephron epithelium | 6.92e-08 | 15 |
renal tubule | 6.92e-08 | 15 |
nephron tubule | 6.92e-08 | 15 |
nephron | 6.92e-08 | 15 |
uriniferous tubule | 6.92e-08 | 15 |
nephrogenic mesenchyme | 6.92e-08 | 15 |
organ component layer | 1.97e-07 | 66 |
excretory tube | 2.23e-07 | 16 |
kidney epithelium | 2.23e-07 | 16 |