FFCP PHASE1:Hg19::chr3:123752204..123752234,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:123752204..123752234,+ to FFCP PHASE1:Hg19::chr3:123752204..123752234,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8997 | |EntrezGene=8997 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4814 | |HGNC=4814 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-307bp_to_uc003ehd.2_5end | |||
|cluster_id=chr3:123752204..123752234,+ | |||
|coexpression_cluster_id=C4276 | |||
|description=CAGE_peak_2_at_KALRN_5end | |||
|id=chr3:123752204..123752234,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.84e-11!24;CL:0000115!5.93e-10!35;CL:0002319!1.10e-07!25;CL:0000071!1.16e-07!18;CL:0002546!1.16e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.21e-13;24!CL:0000115;1.41e-10;36!CL:0000071;7.20e-09;18!CL:0002319;6.00e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.01e-13,24;CL:0000115,8.90e-13,36;CL:0000071,6.60e-09,18;CL:0002546,6.60e-09,18;CL:0002078,1.47e-08,45;CL:0000213,2.37e-07,58;CL:0000215,2.37e-07,58;CL:0002319,5.20e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.61e-10;82!CL:0002546;7.20e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.47e-35!94;UBERON:0001016!3.47e-35!94;UBERON:0005743!2.80e-34!86;UBERON:0007023!3.58e-33!115;UBERON:0001017!3.73e-33!82;UBERON:0000955!1.63e-27!69;UBERON:0006238!1.63e-27!69;UBERON:0001049!2.33e-26!57;UBERON:0005068!2.33e-26!57;UBERON:0006241!2.33e-26!57;UBERON:0007135!2.33e-26!57;UBERON:0003075!2.91e-24!86;UBERON:0007284!2.91e-24!86;UBERON:0002346!3.13e-24!90;UBERON:0002616!1.43e-23!59;UBERON:0003080!6.53e-22!42;UBERON:0002780!1.53e-21!41;UBERON:0001890!1.53e-21!41;UBERON:0006240!1.53e-21!41;UBERON:0000924!2.10e-20!173;UBERON:0006601!2.10e-20!173;UBERON:0004121!3.93e-20!169;UBERON:0003056!6.31e-20!61;UBERON:0002020!6.96e-20!34;UBERON:0003528!6.96e-20!34;UBERON:0001893!9.89e-20!34;UBERON:0004111!1.66e-19!241;UBERON:0001869!2.28e-19!32;UBERON:0002791!4.26e-19!33;UBERON:0000025!5.17e-19!194;UBERON:0000033!5.98e-18!123;UBERON:0000153!1.29e-17!129;UBERON:0007811!1.29e-17!129;UBERON:0000468!3.63e-17!659;UBERON:0000477!2.36e-16!286;UBERON:0000956!3.80e-16!25;UBERON:0000203!3.80e-16!25;UBERON:0002619!3.12e-15!22;UBERON:0000483!5.43e-15!309;UBERON:0000119!6.45e-15!312;UBERON:0001950!1.06e-14!20;UBERON:0000475!6.63e-14!365;UBERON:0000467!2.89e-13!625;UBERON:0000480!4.75e-13!626;UBERON:0000922!1.13e-09!612;UBERON:0000064!1.21e-09!219;UBERON:0002050!1.89e-08!605;UBERON:0005423!1.89e-08!605;UBERON:0000923!3.63e-08!604;UBERON:0005291!3.63e-08!604;UBERON:0006598!3.63e-08!604;UBERON:0002532!3.63e-08!604;UBERON:0001986!1.16e-07!18;UBERON:0004638!1.16e-07!18;UBERON:0004852!1.16e-07!18;UBERON:0000481!2.04e-07!347;UBERON:0000062!7.21e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.14e-21;32!UBERON:0003528;1.41e-20;34!UBERON:0002020;1.41e-20;34!UBERON:0002791;1.53e-20;32!UBERON:0001893;1.94e-20;34!UBERON:0000956;3.83e-19;25!UBERON:0000203;3.83e-19;25!UBERON:0002780;1.65e-18;41!UBERON:0001890;1.65e-18;41!UBERON:0002619;4.39e-18;22!UBERON:0001950;2.00e-17;20!UBERON:0000073;7.97e-17;53!UBERON:0002616;7.97e-17;53!UBERON:0001017;2.39e-13;75!UBERON:0000955;2.89e-13;68!UBERON:0001016;5.14e-12;83!UBERON:0007023;8.01e-11;114!UBERON:0004638;7.20e-09;18!UBERON:0001986;7.20e-09;18!UBERON:0004852;7.20e-09;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.24e-39,114;UBERON:0001017,4.82e-35,81;UBERON:0001016,2.85e-34,89;UBERON:0001049,5.90e-31,56;UBERON:0005068,5.90e-31,56;UBERON:0006241,5.90e-31,56;UBERON:0007135,5.90e-31,56;UBERON:0003075,1.27e-29,82;UBERON:0007284,1.27e-29,82;UBERON:0000073,1.95e-29,53;UBERON:0002616,1.95e-29,53;UBERON:0000955,4.66e-29,68;UBERON:0006238,4.66e-29,68;UBERON:0002346,1.13e-28,86;UBERON:0002780,1.29e-25,41;UBERON:0001890,1.29e-25,41;UBERON:0003080,1.29e-25,41;UBERON:0006240,1.29e-25,41;UBERON:0003056,7.81e-24,61;UBERON:0003528,1.29e-23,34;UBERON:0002020,1.29e-23,34;UBERON:0001893,1.97e-23,34;UBERON:0001869,5.37e-23,32;UBERON:0002791,2.08e-22,32;UBERON:0010371,2.52e-20,104;UBERON:0004121,4.07e-19,171;UBERON:0000924,4.07e-19,171;UBERON:0006601,4.07e-19,171;UBERON:0000956,4.10e-19,25;UBERON:0000203,4.10e-19,25;UBERON:0000025,1.79e-18,192;UBERON:0002619,5.17e-18,22;UBERON:0001950,2.25e-17,20;UBERON:0004111,7.94e-17,240;UBERON:0010314,1.31e-16,132;UBERON:0011216,5.01e-14,223;UBERON:0000483,2.70e-10,306;UBERON:0000119,8.04e-10,309;UBERON:0004638,6.60e-09,18;UBERON:0001986,6.60e-09,18;UBERON:0004852,6.60e-09,18;UBERON:0000922,8.99e-08,592;UBERON:0005423,4.38e-07,581;UBERON:0003076,9.43e-07,15;UBERON:0003057,9.43e-07,15 | |||
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| ||
|short_description=p2@KALRN | |||
}} | }} |
Latest revision as of 02:12, 20 September 2015
Short description: | p2@KALRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KALRN_5end |
Coexpression cluster: | C4276_duodenum_occipital_parietal_aorta_temporal_heart_Neural |
Association with transcript: | -307bp_to_uc003ehd.2_5end |
EntrezGene: | KALRN |
HGNC: | 4814 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.01e-13 | 24 |
endothelial cell | 8.90e-13 | 36 |
blood vessel endothelial cell | 6.60e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.60e-09 | 18 |
meso-epithelial cell | 1.47e-08 | 45 |
lining cell | 2.37e-07 | 58 |
barrier cell | 2.37e-07 | 58 |
neural cell | 5.20e-07 | 25 |