FFCP PHASE1:Hg19::chr3:13877693..13877697,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:13877693..13877697,- | |||
|description=CAGE_peak_at_chr3:13877693..13877697,- | |||
|id=chr3:13877693..13877697,- | |||
|ontology_enrichment_celltype=CL:0000791!5.14e-14!18;CL:0000789!5.14e-14!18;CL:0002420!5.14e-14!18;CL:0002419!5.14e-14!18;CL:0000790!5.14e-14!18;CL:0000625!2.17e-12!11;CL:0000084!2.38e-09!25;CL:0000827!2.38e-09!25;CL:0000623!1.47e-08!3;CL:0000825!1.47e-08!3;CL:0002621!1.76e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.24e-35;3!CL:0000624;1.84e-18;6!CL:0000313;1.61e-13;1!CL:1001319;5.37e-13;1!CL:1000600;5.37e-13;1!CL:0000791;8.75e-11;18!CL:0000789;8.75e-11;18!CL:0002419;8.75e-11;18!CL:0000084;8.08e-08;25!CL:0000159;2.15e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.25e-35,3;CL:0000825,2.25e-35,3;CL:0000624,1.21e-18,6;CL:0000313,1.61e-13,1;CL:1001319,4.77e-13,1;CL:1000600,4.77e-13,1;CL:0000791,8.54e-11,18;CL:0000789,8.54e-11,18;CL:0002420,8.54e-11,18;CL:0002419,8.54e-11,18;CL:0000790,8.54e-11,18;CL:0000838,1.82e-10,52;CL:0000542,2.94e-10,53;CL:0000051,2.94e-10,53;CL:0000084,7.94e-08,25;CL:0000827,7.94e-08,25;CL:0000159,2.15e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;8.75e-11;18 | |||
|ontology_enrichment_disease=DOID:1749!4.35e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.61e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.61e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0001949!1.76e-07!3;UBERON:0001950!3.80e-07!20;UBERON:0001869!6.57e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.61e-13;1!UBERON:0004645;5.37e-13;1!UBERON:0001256;5.37e-13;1!UBERON:0001259;5.37e-13;1!UBERON:0004909;2.15e-07;2!UBERON:0001255;3.92e-07;2!UBERON:0001556;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,1.61e-13,1;UBERON:0004645,4.77e-13,1;UBERON:0001256,4.77e-13,1;UBERON:0001259,4.77e-13,1;UBERON:0004909,2.15e-07,2;UBERON:0001255,3.70e-07,2;UBERON:0001556,3.70e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0.401088894940283,1.51907609501096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.360517241366,1.96505381374582,2.46721798799411,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.296573126324121,0.535081656179426,1.04535523804977,0,0,0.34362744548263,0,0.318565414324097,0.651083453856419,0.950452044448374,0.150575119077773,0,0,0.236777252044017,0,1.00803371612366,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402115889646523,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,1.07813787429759,1.41177339907723,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,1.02090169995667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0.922255617552241,0.538545866458633,1.3037684630641,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0.391329237864179,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.261177619741208,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0.756215088665154,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0.0675375846183947,0,0.413373593002368,0,1.64092442705466,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0.556157009460346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.58607270370949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0.0802413666891683,0,0,0,0,0.0679914901909147,2.18175345170189,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,1.30245229777559,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0.401088894940283,1.51907609501096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.360517241366,1.96505381374582,2.46721798799411,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.296573126324121,0.535081656179426,1.04535523804977,0,0,0.34362744548263,0,0.318565414324097,0.651083453856419,0.950452044448374,0.150575119077773,0,0,0.236777252044017,0,1.00803371612366,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402115889646523,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,1.07813787429759,1.41177339907723,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,1.02090169995667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0.922255617552241,0.538545866458633,1.3037684630641,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0.391329237864179,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.261177619741208,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0.756215088665154,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0.0675375846183947,0,0.413373593002368,0,1.64092442705466,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0.556157009460346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.58607270370949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05868461514708,0.0802413666891683,0,0,0,0,0.0679914901909147,2.18175345170189,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,1.30245229777559,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:13877693..13877697,- | |||
}} | }} |
Latest revision as of 16:18, 29 July 2015
Short description: | p@chr3:13877693..13877697, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:13877693..13877697, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.25e-35 | 3 |
pro-NK cell | 2.25e-35 | 3 |
CD4-positive, alpha-beta T cell | 1.21e-18 | 6 |
serous secreting cell | 1.61e-13 | 1 |
bladder cell | 4.77e-13 | 1 |
lower urinary tract cell | 4.77e-13 | 1 |
mature alpha-beta T cell | 8.54e-11 | 18 |
alpha-beta T cell | 8.54e-11 | 18 |
immature T cell | 8.54e-11 | 18 |
mature T cell | 8.54e-11 | 18 |
immature alpha-beta T cell | 8.54e-11 | 18 |
lymphoid lineage restricted progenitor cell | 1.82e-10 | 52 |
lymphocyte | 2.94e-10 | 53 |
common lymphoid progenitor | 2.94e-10 | 53 |
T cell | 7.94e-08 | 25 |
pro-T cell | 7.94e-08 | 25 |
seromucus secreting cell | 2.15e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 1.61e-13 | 1 |
urinary bladder urothelium | 4.77e-13 | 1 |
wall of urinary bladder | 4.77e-13 | 1 |
mucosa of urinary bladder | 4.77e-13 | 1 |
epithelium of gonad | 2.15e-07 | 2 |
urinary bladder | 3.70e-07 | 2 |
lower urinary tract | 3.70e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.61e-13 | 1 |