FFCP PHASE1:Hg19::chr3:14473916..14473935,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:14473916..14473935,+ to FFCP PHASE1:Hg19::chr3:14473916..14473935,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6533 | |EntrezGene=6533 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11052 | |HGNC=11052 | ||
|TSSclassifier=strong | |||
|UniProt=C9JPV1 | |UniProt=C9JPV1 | ||
|association_with_transcript=-242bp_to_ENST00000452775_5end | |||
|cluster_id=chr3:14473916..14473935,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_5_at_SLC6A6_5end | |||
|id=chr3:14473916..14473935,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.86e-68!140;CL:0000037!4.55e-56!172;CL:0000566!4.55e-56!172;CL:0002087!2.28e-54!119;CL:0000988!2.64e-54!182;CL:0002032!4.57e-54!165;CL:0000837!4.57e-54!165;CL:0002031!1.35e-52!124;CL:0000766!2.25e-42!76;CL:0002057!2.70e-39!42;CL:0000860!1.32e-35!45;CL:0000839!3.06e-32!70;CL:0000557!1.59e-31!71;CL:0000763!7.34e-31!112;CL:0000049!7.34e-31!112;CL:0002194!1.78e-29!63;CL:0000576!1.78e-29!63;CL:0000040!1.78e-29!63;CL:0000559!1.78e-29!63;CL:0002009!4.69e-28!65;CL:0000542!1.21e-20!53;CL:0000051!1.21e-20!53;CL:0000838!4.29e-20!52;CL:0000134!4.34e-12!358;CL:0002320!2.80e-11!365;CL:0000791!7.87e-11!18;CL:0000789!7.87e-11!18;CL:0002420!7.87e-11!18;CL:0002419!7.87e-11!18;CL:0000790!7.87e-11!18;CL:0000094!1.15e-10!8;CL:0000084!9.18e-10!25;CL:0000827!9.18e-10!25;CL:0000219!3.21e-09!390;CL:0002393!4.56e-09!9;CL:0002397!4.56e-09!9;CL:0000945!1.00e-08!24;CL:0000826!1.00e-08!24;CL:0000081!1.02e-08!11;CL:0000624!8.39e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.56e-40;33!CL:0002057;8.56e-40;33!CL:0000473;1.74e-27;39!CL:0000234;1.74e-27;39!CL:0000766;1.69e-25;69!CL:0000576;1.29e-24;48!CL:0000094;1.91e-20;8!CL:0002087;1.14e-16;104!CL:0000081;1.99e-14;11!CL:0000738;1.66e-11;136!CL:0000624;8.89e-11;6!CL:0000763;1.72e-10;100!CL:0000791;4.72e-10;18!CL:0000789;4.72e-10;18!CL:0002419;4.72e-10;18!CL:0000775;1.79e-09;3!CL:0000623;3.32e-09;3!CL:0000988;6.52e-08;177!CL:0000767;1.65e-07;3!CL:0000771;6.39e-07;2!CL:0000084;9.78e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.11e-55,136;CL:0000766,1.55e-48,72;CL:0000860,1.81e-47,42;CL:0002057,1.81e-47,42;CL:0000037,2.31e-43,168;CL:0002087,1.88e-42,115;CL:0002032,2.05e-42,161;CL:0000837,2.05e-42,161;CL:0002031,6.46e-42,120;CL:0000473,2.08e-40,48;CL:0000234,2.08e-40,48;CL:0000988,2.32e-40,177;CL:0000839,1.49e-32,66;CL:0000557,6.23e-32,67;CL:0002194,1.51e-30,59;CL:0000576,1.51e-30,59;CL:0000040,1.51e-30,59;CL:0000559,1.51e-30,59;CL:0000763,3.35e-30,108;CL:0000049,3.35e-30,108;CL:0002009,2.80e-29,61;CL:0000094,2.88e-20,8;CL:0000081,2.66e-14,11;CL:0000134,1.92e-12,354;CL:0002320,6.52e-12,361;CL:0000838,3.10e-11,52;CL:0000542,6.17e-11,53;CL:0000051,6.17e-11,53;CL:0000624,7.44e-11,6;CL:0000219,4.72e-10,386;CL:0000791,4.95e-10,18;CL:0000789,4.95e-10,18;CL:0002420,4.95e-10,18;CL:0002419,4.95e-10,18;CL:0000790,4.95e-10,18;CL:0000775,1.80e-09,3;CL:0000623,3.25e-09,3;CL:0000825,3.25e-09,3;CL:0000048,8.17e-08,427;CL:0000723,1.65e-07,433;CL:0000767,2.38e-07,3;CL:0000034,4.06e-07,441;CL:0000771,6.42e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.27e-35;42!CL:0000790;4.72e-10;18!CL:0000049;2.62e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.27e-42!102;UBERON:0003061!1.27e-42!102;UBERON:0002193!3.61e-39!112;UBERON:0002371!4.93e-27!80;UBERON:0001474!7.07e-26!86;UBERON:0002405!3.84e-21!115;UBERON:0004765!2.55e-19!101;UBERON:0001434!2.55e-19!101;UBERON:0000178!2.06e-13!15;UBERON:0000179!2.06e-13!15;UBERON:0000463!2.06e-13!15;UBERON:0003081!1.77e-11!216;UBERON:0002384!1.31e-10!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.61e-15;15!UBERON:0000179;2.61e-15;15!UBERON:0000463;2.61e-15;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.11e-40,98;UBERON:0003061,2.11e-40,98;UBERON:0002193,1.56e-35,108;UBERON:0002371,4.38e-27,76;UBERON:0001474,1.91e-24,82;UBERON:0002405,1.50e-23,93;UBERON:0004765,1.77e-21,90;UBERON:0001434,1.91e-18,100;UBERON:0000178,2.52e-15,15;UBERON:0000179,2.52e-15,15;UBERON:0000463,2.52e-15,15;UBERON:0003081,2.33e-13,203;UBERON:0002384,3.44e-11,371;UBERON:0002204,9.90e-08,167 | |||
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|short_description=p5@SLC6A6 | |||
}} | }} |
Latest revision as of 05:47, 25 September 2015
Short description: | p5@SLC6A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC6A6_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -242bp_to_ENST00000452775_5end |
EntrezGene: | SLC6A6 |
HGNC: | 11052 |
UniProt: | C9JPV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.11e-40 | 98 |
blood island | 2.11e-40 | 98 |
hemolymphoid system | 1.56e-35 | 108 |
bone marrow | 4.38e-27 | 76 |
bone element | 1.91e-24 | 82 |
immune system | 1.50e-23 | 93 |
skeletal element | 1.77e-21 | 90 |
skeletal system | 1.91e-18 | 100 |
blood | 2.52e-15 | 15 |
haemolymphatic fluid | 2.52e-15 | 15 |
organism substance | 2.52e-15 | 15 |
lateral plate mesoderm | 2.33e-13 | 203 |
connective tissue | 3.44e-11 | 371 |
musculoskeletal system | 9.90e-08 | 167 |