FFCP PHASE1:Hg19::chr4:10118075..10118107,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:10118075..10118107,- to FFCP PHASE1:Hg19::chr4:10118075..10118107,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9948 | |EntrezGene=9948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12754 | |HGNC=12754 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000514319_5end | |||
|cluster_id=chr4:10118075..10118107,- | |||
|coexpression_cluster_id=C2766 | |||
|description=CAGE_peak_5_at_WDR1_5end | |||
|id=chr4:10118075..10118107,- | |||
|ontology_enrichment_celltype=CL:0000222!5.60e-34!119;CL:0000055!1.22e-32!180;CL:0002371!9.23e-22!591;CL:0000144!1.59e-21!625;CL:0000220!4.72e-19!246;CL:0000183!9.87e-19!59;CL:0000680!1.03e-18!57;CL:0000056!1.03e-18!57;CL:0000355!1.03e-18!57;CL:0002321!1.17e-18!248;CL:0000192!1.56e-18!42;CL:0000514!1.56e-18!42;CL:0000187!3.94e-18!54;CL:0000057!9.51e-18!75;CL:0000359!2.24e-16!32;CL:0000393!6.16e-15!60;CL:0000211!6.16e-15!60;CL:0000548!7.95e-15!679;CL:0000004!7.95e-15!679;CL:0000255!7.95e-15!679;CL:0000213!8.24e-15!57;CL:0000215!8.24e-15!57;CL:0000012!2.60e-14!682;CL:0000048!2.63e-11!430;CL:0000115!3.86e-11!35;CL:0002078!5.06e-11!44;CL:0000723!2.36e-10!436;CL:0002139!3.97e-10!24;CL:0000071!1.28e-09!18;CL:0002546!1.28e-09!18;CL:0000034!1.50e-09!444;CL:0000003!7.12e-08!722 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.94e-18;32!CL:0000192;1.96e-15;43!CL:0000187;1.08e-11;55!CL:0002139;1.19e-11;24!CL:0000115;2.75e-11;36!CL:0000071;2.94e-11;18!CL:0000213;1.00e-10;58!CL:0000215;1.00e-10;58!CL:0002078;6.06e-09;45!CL:0000393;6.43e-09;61!CL:0000211;6.43e-09;61!CL:0000057;2.78e-08;73!CL:0002494;3.44e-07;16!CL:1000413;4.25e-07;9!CL:0000134;8.31e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.57e-41,121;CL:0000680,1.69e-22,58;CL:0000056,1.69e-22,58;CL:0000355,1.69e-22,58;CL:0000192,7.40e-22,43;CL:0000514,7.40e-22,43;CL:0000187,8.31e-22,55;CL:0000057,1.50e-20,76;CL:0002321,2.39e-20,250;CL:0000359,3.71e-19,32;CL:0000393,3.39e-18,61;CL:0000211,3.39e-18,61;CL:0000213,3.96e-17,58;CL:0000215,3.96e-17,58;CL:0000048,9.84e-14,427;CL:0002078,1.35e-13,45;CL:0000115,1.63e-13,36;CL:0000723,1.23e-12,433;CL:0002139,9.82e-12,24;CL:0000034,1.67e-11,441;CL:0000071,3.93e-11,18;CL:0002546,3.93e-11,18;CL:0002494,2.32e-07,16;CL:1000413,4.24e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000514;1.96e-15;43!CL:0000222;2.10e-11;121!CL:0000355;2.83e-11;58!CL:0002546;2.94e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.32e-28!79;UBERON:0007798!3.32e-28!79;UBERON:0000055!1.98e-25!69;UBERON:0001981!1.85e-24!60;UBERON:0007500!1.85e-24!60;UBERON:0004537!1.85e-24!60;UBERON:0006965!1.85e-24!60;UBERON:0004872!4.77e-24!84;UBERON:0004535!1.45e-21!110;UBERON:0001637!2.97e-21!42;UBERON:0003509!2.97e-21!42;UBERON:0004572!2.97e-21!42;UBERON:0000914!1.04e-20!83;UBERON:0002329!1.04e-20!83;UBERON:0003077!1.04e-20!83;UBERON:0003059!1.04e-20!83;UBERON:0007282!1.04e-20!83;UBERON:0009618!1.04e-20!83;UBERON:0007285!1.04e-20!83;UBERON:0001009!3.74e-20!113;UBERON:0004290!7.01e-18!70;UBERON:0003914!2.39e-17!118;UBERON:0005256!2.45e-17!143;UBERON:0000486!3.06e-16!82;UBERON:0004573!5.48e-16!33;UBERON:0004571!5.48e-16!33;UBERON:0001134!7.58e-16!61;UBERON:0002036!7.58e-16!61;UBERON:0003082!7.58e-16!61;UBERON:0002385!1.33e-15!63;UBERON:0001015!1.33e-15!63;UBERON:0000383!1.33e-15!63;UBERON:0000490!5.03e-15!138;UBERON:0000926!6.55e-14!448;UBERON:0004120!6.55e-14!448;UBERON:0006603!6.55e-14!448;UBERON:0003081!7.02e-14!216;UBERON:0002100!6.14e-12!216;UBERON:0002204!1.93e-11!167;UBERON:0000947!3.84e-10!21;UBERON:0010191!3.84e-10!21;UBERON:0000468!8.72e-10!659;UBERON:0000467!9.17e-10!625;UBERON:0001986!1.28e-09!18;UBERON:0004638!1.28e-09!18;UBERON:0004852!1.28e-09!18;UBERON:0000480!1.28e-09!626;UBERON:0000487!4.06e-08!22;UBERON:0006914!5.18e-08!25;UBERON:0000483!1.97e-07!309;UBERON:0000119!2.27e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.62e-18;42!UBERON:0003509;4.62e-18;42!UBERON:0004572;4.62e-18;42!UBERON:0007500;3.57e-17;56!UBERON:0001981;3.57e-17;56!UBERON:0004537;3.57e-17;56!UBERON:0004573;4.46e-17;33!UBERON:0004571;4.46e-17;33!UBERON:0000055;2.42e-14;65!UBERON:0002049;1.35e-13;75!UBERON:0007798;1.35e-13;75!UBERON:0003914;1.32e-12;74!UBERON:0000947;8.85e-12;21!UBERON:0010191;8.85e-12;21!UBERON:0004638;2.94e-11;18!UBERON:0001986;2.94e-11;18!UBERON:0004852;2.94e-11;18!UBERON:0000487;7.35e-10;22!UBERON:0006914;1.21e-09;25!UBERON:0004535;5.63e-08;109!UBERON:0001009;2.22e-07;112!UBERON:0003915;4.25e-07;9!UBERON:0004700;4.25e-07;9!UBERON:0001917;4.25e-07;9 | |||
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| ||
|short_description=p5@WDR1 | |||
}} | }} |
Latest revision as of 02:36, 20 September 2015
Short description: | p5@WDR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_WDR1_5end |
Coexpression cluster: | C2766_Smooth_Hair_spindle_leiomyoma_Endothelial_bone_Multipotent |
Association with transcript: | 0bp_to_ENST00000514319_5end |
EntrezGene: | WDR1 |
HGNC: | 12754 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.57e-41 | 121 |
muscle precursor cell | 1.69e-22 | 58 |
myoblast | 1.69e-22 | 58 |
multi-potent skeletal muscle stem cell | 1.69e-22 | 58 |
smooth muscle cell | 7.40e-22 | 43 |
smooth muscle myoblast | 7.40e-22 | 43 |
muscle cell | 8.31e-22 | 55 |
fibroblast | 1.50e-20 | 76 |
embryonic cell | 2.39e-20 | 250 |
vascular associated smooth muscle cell | 3.71e-19 | 32 |
electrically responsive cell | 3.39e-18 | 61 |
electrically active cell | 3.39e-18 | 61 |
lining cell | 3.96e-17 | 58 |
barrier cell | 3.96e-17 | 58 |
multi fate stem cell | 9.84e-14 | 427 |
meso-epithelial cell | 1.35e-13 | 45 |
endothelial cell | 1.63e-13 | 36 |
somatic stem cell | 1.23e-12 | 433 |
endothelial cell of vascular tree | 9.82e-12 | 24 |
stem cell | 1.67e-11 | 441 |
blood vessel endothelial cell | 3.93e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.93e-11 | 18 |
cardiocyte | 2.32e-07 | 16 |
endothelial cell of artery | 4.24e-07 | 9 |