FFCP PHASE1:Hg19::chr4:107237688..107237717,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:107237688..107237717,+ to FFCP PHASE1:Hg19::chr4:107237688..107237717,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9255 | |EntrezGene=9255 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10648 | |HGNC=10648 | ||
|TSSclassifier=strong | |||
|UniProt=Q12904 | |UniProt=Q12904 | ||
|association_with_transcript=24bp_to_ENST00000394701,NM_001142416,uc003hyh.2_5end | |||
|cluster_id=chr4:107237688..107237717,+ | |||
|description=CAGE_peak_1_at_AIMP1_5end | |||
|id=chr4:107237688..107237717,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.54e-15!172;CL:0000566!1.54e-15!172;CL:0002032!4.65e-14!165;CL:0000837!4.65e-14!165;CL:0000988!5.51e-14!182;CL:0000542!1.85e-12!53;CL:0000051!1.85e-12!53;CL:0000838!4.31e-12!52;CL:0002087!8.20e-12!119;CL:0002031!1.20e-11!124;CL:0000063!1.31e-11!578;CL:0000738!5.27e-11!140;CL:0000134!1.59e-09!358;CL:0000003!2.86e-09!722;CL:0002320!1.44e-08!365;CL:0000012!1.49e-07!682;CL:0000219!2.51e-07!390;CL:0000548!2.59e-07!679;CL:0000004!2.59e-07!679;CL:0000255!2.59e-07!679;CL:0000791!3.33e-07!18;CL:0000789!3.33e-07!18;CL:0002420!3.33e-07!18;CL:0002419!3.33e-07!18;CL:0000790!3.33e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.86e-07;53!CL:0000791;3.51e-07;18!CL:0000789;3.51e-07;18!CL:0002419;3.51e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.03e-15,168;CL:0000988,4.83e-14,177;CL:0002032,1.19e-13,161;CL:0000837,1.19e-13,161;CL:0000542,1.85e-12,53;CL:0000051,1.85e-12,53;CL:0000838,4.31e-12,52;CL:0002087,1.94e-11,115;CL:0002031,2.84e-11,120;CL:0000738,1.26e-10,136;CL:0000134,2.37e-09,354;CL:0002320,2.11e-08,361;CL:0000791,3.33e-07,18;CL:0000789,3.33e-07,18;CL:0002420,3.33e-07,18;CL:0002419,3.33e-07,18;CL:0000790,3.33e-07,18;CL:0000219,3.60e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000051;2.86e-07;53!CL:0000790;3.51e-07;18 | |||
|ontology_enrichment_disease=DOID:162!1.94e-21!235;DOID:14566!1.05e-20!239;DOID:305!3.06e-12!106;DOID:0050687!7.13e-12!143;DOID:0050686!2.01e-10!137;DOID:2531!1.55e-08!51;DOID:0060083!1.55e-08!51;DOID:1240!1.22e-07!39;DOID:8692!5.67e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.94e-21,235;DOID:14566,1.05e-20,239;DOID:305,3.06e-12,106;DOID:0050687,7.13e-12,143;DOID:0050686,2.01e-10,137;DOID:2531,1.55e-08,51;DOID:0060083,1.55e-08,51;DOID:1240,1.22e-07,39;DOID:8692,5.67e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.74e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.57e-09,371 | |||
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| ||
|short_description=p1@AIMP1 | |||
}} | }} |
Latest revision as of 07:13, 20 September 2015
Short description: | p1@AIMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AIMP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000394701, NM_001142416, uc003hyh.2_5end |
EntrezGene: | AIMP1 |
HGNC: | 10648 |
UniProt: | Q12904 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 4.03e-15 | 168 |
hematopoietic cell | 4.83e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.19e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.19e-13 | 161 |
lymphocyte | 1.85e-12 | 53 |
common lymphoid progenitor | 1.85e-12 | 53 |
lymphoid lineage restricted progenitor cell | 4.31e-12 | 52 |
nongranular leukocyte | 1.94e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 2.84e-11 | 120 |
leukocyte | 1.26e-10 | 136 |
mesenchymal cell | 2.37e-09 | 354 |
connective tissue cell | 2.11e-08 | 361 |
mature alpha-beta T cell | 3.33e-07 | 18 |
alpha-beta T cell | 3.33e-07 | 18 |
immature T cell | 3.33e-07 | 18 |
mature T cell | 3.33e-07 | 18 |
immature alpha-beta T cell | 3.33e-07 | 18 |
motile cell | 3.60e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.57e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.94e-21 | 235 |
disease of cellular proliferation | 1.05e-20 | 239 |
carcinoma | 3.06e-12 | 106 |
cell type cancer | 7.13e-12 | 143 |
organ system cancer | 2.01e-10 | 137 |
hematologic cancer | 1.55e-08 | 51 |
immune system cancer | 1.55e-08 | 51 |
leukemia | 1.22e-07 | 39 |
myeloid leukemia | 5.67e-07 | 31 |