FFCP PHASE1:Hg19::chr4:114682364..114682379,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:114682364..114682379,- to FFCP PHASE1:Hg19::chr4:114682364..114682379,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=817 | |EntrezGene=817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1462 | |HGNC=1462 | ||
|TSSclassifier=strong | |||
|UniProt=E9PF82 | |UniProt=E9PF82 | ||
|association_with_transcript=0bp_to_ENST00000511664_5end | |||
|cluster_id=chr4:114682364..114682379,- | |||
|coexpression_cluster_id=C2772 | |||
|description=CAGE_peak_3_at_CAMK2D_5end | |||
|id=chr4:114682364..114682379,- | |||
|ontology_enrichment_celltype=CL:0000055!1.92e-17!180;CL:0000057!1.12e-12!75;CL:0000048!4.81e-12!430;CL:0000723!8.29e-11!436;CL:0002620!7.58e-10!23;CL:0000034!1.78e-09!444;CL:0000680!6.39e-07!57;CL:0000056!6.39e-07!57;CL:0000355!6.39e-07!57;CL:0002320!8.22e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.57e-10;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,6.61e-15,427;CL:0000723,2.22e-13,433;CL:0000057,1.42e-12,76;CL:0000034,5.57e-12,441;CL:0002620,5.77e-10,23;CL:0002320,1.67e-08,361;CL:0000680,1.99e-07,58;CL:0000056,1.99e-07,58;CL:0000355,1.99e-07,58;CL:0000134,2.09e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.26e-11!83;UBERON:0002329!1.26e-11!83;UBERON:0003077!1.26e-11!83;UBERON:0003059!1.26e-11!83;UBERON:0007282!1.26e-11!83;UBERON:0009618!1.26e-11!83;UBERON:0007285!1.26e-11!83;UBERON:0004290!2.67e-09!70;UBERON:0002204!4.49e-09!167;UBERON:0002385!2.31e-08!63;UBERON:0001015!2.31e-08!63;UBERON:0000383!2.31e-08!63;UBERON:0001134!6.30e-08!61;UBERON:0002036!6.30e-08!61;UBERON:0003082!6.30e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.64e-07;31!UBERON:0001015;2.64e-07;31!UBERON:0000383;2.64e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.00e-11,167;UBERON:0007524,2.57e-10,73;UBERON:0003077,6.40e-10,72;UBERON:0007285,6.40e-10,72;UBERON:0002329,7.20e-10,71;UBERON:0003059,7.20e-10,71;UBERON:0007282,7.20e-10,71;UBERON:0004290,7.20e-10,71;UBERON:0009618,7.20e-10,71;UBERON:0000926,1.15e-09,315;UBERON:0004120,1.15e-09,315;UBERON:0006603,1.15e-09,315;UBERON:0002385,6.52e-09,64;UBERON:0001015,6.52e-09,64;UBERON:0000383,6.52e-09,64;UBERON:0001134,1.83e-08,62;UBERON:0002036,1.83e-08,62;UBERON:0003082,1.83e-08,62;UBERON:0002384,2.01e-08,371;UBERON:0007503,4.62e-08,78;UBERON:0000479,4.13e-07,773;UBERON:0000486,4.71e-07,83 | |||
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| ||
|short_description=p3@CAMK2D | |||
}} | }} |
Latest revision as of 19:23, 24 September 2015
Short description: | p3@CAMK2D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CAMK2D_5end |
Coexpression cluster: | C2772_mesenchymal_Fibroblast_Cardiac_Smooth_Chondrocyte_Anulus_tenocyte |
Association with transcript: | 0bp_to_ENST00000511664_5end |
EntrezGene: | CAMK2D |
HGNC: | 1462 |
UniProt: | E9PF82 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 6.61e-15 | 427 |
somatic stem cell | 2.22e-13 | 433 |
fibroblast | 1.42e-12 | 76 |
stem cell | 5.57e-12 | 441 |
skin fibroblast | 5.77e-10 | 23 |
connective tissue cell | 1.67e-08 | 361 |
muscle precursor cell | 1.99e-07 | 58 |
myoblast | 1.99e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.99e-07 | 58 |
mesenchymal cell | 2.09e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.00e-11 | 167 |
dense mesenchyme tissue | 2.57e-10 | 73 |
paraxial mesoderm | 6.40e-10 | 72 |
presumptive paraxial mesoderm | 6.40e-10 | 72 |
somite | 7.20e-10 | 71 |
presomitic mesoderm | 7.20e-10 | 71 |
presumptive segmental plate | 7.20e-10 | 71 |
dermomyotome | 7.20e-10 | 71 |
trunk paraxial mesoderm | 7.20e-10 | 71 |
mesoderm | 1.15e-09 | 315 |
mesoderm-derived structure | 1.15e-09 | 315 |
presumptive mesoderm | 1.15e-09 | 315 |
muscle tissue | 6.52e-09 | 64 |
musculature | 6.52e-09 | 64 |
musculature of body | 6.52e-09 | 64 |
skeletal muscle tissue | 1.83e-08 | 62 |
striated muscle tissue | 1.83e-08 | 62 |
myotome | 1.83e-08 | 62 |
connective tissue | 2.01e-08 | 371 |
epithelial vesicle | 4.62e-08 | 78 |
tissue | 4.13e-07 | 773 |
multilaminar epithelium | 4.71e-07 | 83 |