FFCP PHASE1:Hg19::chr4:143489460..143489483,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr4:143489460..143489483,- to FFCP PHASE1:Hg19::chr4:143489460..143489483,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:143489460..143489483,- | |||
|coexpression_cluster_id=C4375 | |||
|description=CAGE_peak_at_chr4:143489460..143489483,- | |||
|id=chr4:143489460..143489483,- | |||
|ontology_enrichment_celltype=CL:0000791!6.19e-23!18;CL:0000789!6.19e-23!18;CL:0002420!6.19e-23!18;CL:0002419!6.19e-23!18;CL:0000790!6.19e-23!18;CL:0000084!2.58e-15!25;CL:0000827!2.58e-15!25;CL:0000625!6.36e-14!11;CL:0000624!1.41e-12!6;CL:0000838!3.04e-10!52;CL:0000542!5.95e-10!53;CL:0000051!5.95e-10!53;CL:0000842!7.62e-07!3;CL:0000898!8.94e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000624;1.08e-11;6!CL:0000791;4.52e-10;18!CL:0000789;4.52e-10;18!CL:0002419;4.52e-10;18!CL:0000084;3.39e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,9.87e-12,6;CL:0000791,3.91e-10,18;CL:0000789,3.91e-10,18;CL:0002420,3.91e-10,18;CL:0002419,3.91e-10,18;CL:0000790,3.91e-10,18;CL:0000084,3.06e-07,25;CL:0000827,3.06e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;4.52e-10;18!UBERON:0006242;5.07e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;2.53e-16;2!DOID:299;1.60e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,2.95e-16,2;DOID:299,1.78e-10,25 | |||
|ontology_enrichment_uberon=UBERON:0005409!4.36e-10!35;UBERON:0000160!7.59e-09!27;UBERON:0002294!1.11e-07!7;UBERON:0001173!1.11e-07!7;UBERON:0004912!1.11e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;7.63e-25;22!UBERON:0002108;2.85e-24;4!UBERON:0000160;1.63e-19;17!UBERON:0004921;5.17e-15;33!UBERON:0002114;6.28e-11;2!UBERON:0004913;5.07e-09;1!UBERON:0003703;5.07e-09;1!UBERON:0001174;5.07e-09;1!UBERON:0004914;5.07e-09;1!UBERON:0001155;5.86e-08;9!UBERON:0000945;6.84e-07;5!UBERON:0010039;6.84e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,3.13e-24,4;UBERON:0005409,9.08e-22,25;UBERON:0000160,1.83e-19,17;UBERON:0002114,8.06e-11,2;UBERON:0004913,4.89e-09,1;UBERON:0003703,4.89e-09,1;UBERON:0001174,4.89e-09,1;UBERON:0004914,4.89e-09,1;UBERON:0001155,6.23e-08,9 | |||
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| ||
|short_description=p@chr4:143489460..143489483,- | |||
}} | }} |
Latest revision as of 01:55, 30 July 2015
Short description: | p@chr4:143489460..143489483, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:143489460..143489483, - |
Coexpression cluster: | C4375_small_adenocarcinoma_signet_colon_CD4_papillotubular_gall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 9.87e-12 | 6 |
mature alpha-beta T cell | 3.91e-10 | 18 |
alpha-beta T cell | 3.91e-10 | 18 |
immature T cell | 3.91e-10 | 18 |
mature T cell | 3.91e-10 | 18 |
immature alpha-beta T cell | 3.91e-10 | 18 |
T cell | 3.06e-07 | 25 |
pro-T cell | 3.06e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
small intestine | 3.13e-24 | 4 |
gastrointestinal system | 9.08e-22 | 25 |
intestine | 1.83e-19 | 17 |
duodenum | 8.06e-11 | 2 |
hepatopancreatic ampulla | 4.89e-09 | 1 |
extrahepatic bile duct | 4.89e-09 | 1 |
common bile duct | 4.89e-09 | 1 |
duodenal papilla | 4.89e-09 | 1 |
colon | 6.23e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 2.95e-16 | 2 |
adenocarcinoma | 1.78e-10 | 25 |