FFCP PHASE1:Hg19::chr4:89744409..89744412,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:89744409..89744412,- to FFCP PHASE1:Hg19::chr4:89744409..89744412,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10144 | |EntrezGene=10144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19367 | |HGNC=19367 | ||
|TSSclassifier=strong | |||
|UniProt=D6RD35 | |UniProt=D6RD35 | ||
|association_with_transcript=0bp_to_ENST00000504836_5end | |||
|cluster_id=chr4:89744409..89744412,- | |||
|description=CAGE_peak_19_at_FAM13A_5end | |||
|id=chr4:89744409..89744412,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;1.21e-16;1!CL:0000557;1.21e-16;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.84e-16;4!UBERON:0007284;2.84e-16;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.05e-19!115;UBERON:0001049!3.45e-12!57;UBERON:0005068!3.45e-12!57;UBERON:0006241!3.45e-12!57;UBERON:0007135!3.45e-12!57;UBERON:0002020!3.16e-10!34;UBERON:0003528!3.16e-10!34;UBERON:0001893!1.25e-09!34;UBERON:0002616!1.76e-09!59;UBERON:0003080!2.13e-09!42;UBERON:0002791!3.63e-09!33;UBERON:0003075!5.12e-09!86;UBERON:0007284!5.12e-09!86;UBERON:0002780!1.04e-08!41;UBERON:0001890!1.04e-08!41;UBERON:0006240!1.04e-08!41;UBERON:0001869!1.27e-08!32;UBERON:0002346!1.42e-08!90;UBERON:0001017!1.61e-08!82;UBERON:0005743!2.85e-08!86;UBERON:0000955!7.58e-08!69;UBERON:0006238!7.58e-08!69;UBERON:0002619!1.49e-07!22;UBERON:0000073!1.93e-07!94;UBERON:0001016!1.93e-07!94;UBERON:0001950!2.51e-07!20;UBERON:0000956!6.63e-07!25;UBERON:0000203!6.63e-07!25;UBERON:0000153!8.61e-07!129;UBERON:0007811!8.61e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;1.86e-31;2!UBERON:0003978;2.40e-21;3!UBERON:0000946;2.40e-21;3!UBERON:0005795;1.21e-16;1!UBERON:0001000;1.21e-16;1!UBERON:0002135;1.21e-16;1!UBERON:0002134;1.21e-16;1!UBERON:0005208;1.21e-16;1!UBERON:0004145;1.21e-16;1!UBERON:0005946;1.21e-16;1!UBERON:0005352;1.21e-16;1!UBERON:0005965;1.21e-16;1!UBERON:0002078;1.21e-16;1!UBERON:0002370;5.49e-09;2!UBERON:0000341;5.49e-09;2!UBERON:0002148;5.49e-09;2!UBERON:0002081;5.49e-09;2!UBERON:0006331;5.49e-09;2!UBERON:0009662;5.49e-09;2!UBERON:0005058;5.49e-09;2!UBERON:0009113;5.49e-09;2!UBERON:0010313;4.66e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,2.54e-31,2;UBERON:0003978,2.96e-21,3;UBERON:0009751,2.96e-21,3;UBERON:0000946,2.96e-21,3;UBERON:0002523,2.96e-21,3;UBERON:0005983,2.96e-21,3;UBERON:0002165,2.96e-21,3;UBERON:0002062,2.96e-21,3;UBERON:0007280,2.96e-21,3;UBERON:0002134,7.57e-17,1;UBERON:0005208,7.57e-17,1;UBERON:0005946,7.57e-17,1;UBERON:0005965,7.57e-17,1;UBERON:0002078,7.57e-17,1;UBERON:0001000,2.25e-16,1;UBERON:0005352,2.25e-16,1;UBERON:0002135,2.63e-16,1;UBERON:0004797,1.13e-09,7;UBERON:0002081,4.34e-09,2;UBERON:0010227,4.34e-09,2;UBERON:0000341,6.42e-09,2;UBERON:0002148,6.94e-09,2;UBERON:0006331,6.94e-09,2;UBERON:0009662,6.94e-09,2;UBERON:0000974,4.66e-07,10;UBERON:0010313,4.96e-07,10;UBERON:0002342,4.96e-07,10;UBERON:0005062,4.96e-07,10 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.152826811495903,0.246301768349837,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,1.29557466407592,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0.211255286311942,0,0.419317291016752,0.336985893439485,0.150176892841506,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0.473447805734733,0,0,0,0,0.270803863765016,0,0,0.164437904603676,0,0,0.296573126324121,0.535081656179426,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0.318565414324097,0,0.950452044448374,0,0.255973222308837,0,0.710331756132051,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,0.324547393654683,0.348259474598534,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0.117434498643765,0,0.280901613404497,0.204154171254893,0.122834317311768,0.103325781175765,0,0,0,0,0.505008341862199,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0,0,0,0,0.088048434013226,0.829312462163088,0.576479813667846,0.12624243342638,0.063497894292169,0,0,0,0,0,0.571652865261156,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0.502548796003046,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0,0.0920809889358963,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0.214840489736547,0.290033387828457,0,0,0,0,0.127612712494584,0.10115778085555,0.464845549297286,0,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0.855877976067841,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0.569647187174163,0,0,0.648473311192717,0,0,0.106824071127473,0,0,0,0,0.142283686696828,0,0,0.5745161103971,0,0.324621940274555,0,0,0.156679895773023,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0.422008249231538,0.222617410045812,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0.493217028184668,0,0,0,0.463840490809256,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0.331737779793674,0,0.219385397153973,0,0.139423744278603,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,1.18375320854817,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0.173559738335131,0,0,0.52418000472609,0,0.387025325156341,0,0.0821154570532092,0,0,0.225980740780532,0,0.19871461170299,0.189932387867636,0.195551382734803,0,0.640358984218058,0,0,0,0,0.14405479798815,0,0.235694034616795,0.271808412147228,0,0,0,0,0.273810757783986,1.27746588066972,0.429765441419957,0,1.11712960508902,0.229160424011684,1.43574604915363,0,0,0,0.53746777989381,0,0,0,0,0.0674035438541849,0,0,0,0.681017030557878,0,0,0,0,0,0.242998226632099,0,0.157611414598396,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0.387848869084652,1.19009341568421,0,0.704815022316672,0.106787412567695,0.157204305099666,0,0,0,0,0.638341257770182,1.63205341010842,0.2506898940227,0.306345576763462,0,0,0,0.244052529803926,0.625954653532499,0,0.554645257684261,0.18628920882415,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0.194860308839388,0.398594520940089,0,0.327609848846413,0,0,0,0,0.172214979660816,0,0.184105950251841,0,0,0,0,0,0.436838552768056,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.513833800771676,0,0.638535436228605,0.205116364240755,0.504143392443436,0.138314504928436,0,0,0,0,0,0,0.381382095467167,0,0,0.0752103283492573,0,0.781514011233092,0,0,0.147856086217045,0.202612753855184,0,1.03343398250592,0.380494861163441,0.546974809018219,0,0,0,0.127762427639595,0,0.336283722218824,0,0,0,0,0.171488009437418,0.40781839786099,0.131545547125698,0.236387681767936,0.111231401892069,0.470958557103084,0.471346769748006,0,0,0.215927591218621,1.9110067515482,0.428859265059938,0,0,0,0,0.207216164163037,0,0,0.430227358820278,0,0.0852134047591577,0,0,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0,0,0.219881033490858,0.150962843566674,0,0.43711912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| ||
|short_description=p19@FAM13A | |||
}} | }} |
Latest revision as of 08:17, 19 September 2015
Short description: | p19@FAM13A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_FAM13A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000504836_5end |
EntrezGene: | FAM13A |
HGNC: | 19367 |
UniProt: | D6RD35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 2.54e-31 | 2 |
valve | 2.96e-21 | 3 |
cardiac mesenchyme | 2.96e-21 | 3 |
cardial valve | 2.96e-21 | 3 |
tunica intima | 2.96e-21 | 3 |
heart layer | 2.96e-21 | 3 |
endocardium | 2.96e-21 | 3 |
endocardial cushion | 2.96e-21 | 3 |
presumptive endocardium | 2.96e-21 | 3 |
tricuspid valve | 7.57e-17 | 1 |
right atrium valve | 7.57e-17 | 1 |
outflow tract of atrium | 7.57e-17 | 1 |
outflow part of right atrium | 7.57e-17 | 1 |
right cardiac atrium | 7.57e-17 | 1 |
vas deferens | 2.25e-16 | 1 |
spermatic cord | 2.25e-16 | 1 |
mitral valve | 2.63e-16 | 1 |
blood vessel layer | 1.13e-09 | 7 |
cardiac atrium | 4.34e-09 | 2 |
future cardiac atrium | 4.34e-09 | 2 |
throat | 6.42e-09 | 2 |
locus ceruleus | 6.94e-09 | 2 |
brainstem nucleus | 6.94e-09 | 2 |
hindbrain nucleus | 6.94e-09 | 2 |
neck | 4.66e-07 | 10 |
neural crest-derived structure | 4.96e-07 | 10 |
neural crest | 4.96e-07 | 10 |
neural fold | 4.96e-07 | 10 |