FFCP PHASE1:Hg19::chr4:89978299..89978346,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:89978299..89978346,- to FFCP PHASE1:Hg19::chr4:89978299..89978346,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10144 | |EntrezGene=10144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19367 | |HGNC=19367 | ||
|TSSclassifier=strong | |||
|UniProt=O94988,D6RFM4,E9PGM7,D6RCC1,Q6P521 | |UniProt=O94988,D6RFM4,E9PGM7,D6RCC1,Q6P521 | ||
|association_with_transcript=0bp_to_ENST00000264344,ENST00000509094,ENST00000511976,ENST00000512339,NM_014883,uc003hse.1,uc003hsf.1,uc003hsi.2,uc003hsj.2_5end | |||
|cluster_id=chr4:89978299..89978346,- | |||
|description=CAGE_peak_2_at_FAM13A_5end | |||
|id=chr4:89978299..89978346,- | |||
|ontology_enrichment_celltype=CL:0000055!3.12e-13!180;CL:0000057!3.18e-09!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.89e-09,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!3.13e-11!347;UBERON:0003102!2.84e-10!95;UBERON:0000475!3.43e-10!365;UBERON:0000924!4.70e-07!173;UBERON:0006601!4.70e-07!173 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,8.78e-10,99;UBERON:0004121,1.04e-07,171;UBERON:0000924,1.04e-07,171;UBERON:0006601,1.04e-07,171 | |||
|phase1_expression=10.9007027562334,8.13581990785736,13.2497139850213,9.00659685178174,5.36353313312745,14.8297549097063,2.53299878168311,8.84407822797563,8.09675447419499,3.93174298402414,0.697801167972428,0.873765488520689,1.05506791291381,7.54974753056284,3.64537113300707,4.70627602516243,3.01347264011988,5.11217063271161,2.92759679274304,5.17108443922509,1.63200552995402,1.25381888591235,10.018259549587,6.43309797842556,7.28147309649856,2.75088260692625,2.21671591514854,1.81034797021462,0.393364276848904,0.767658796194425,0.154816123316076,0,2.409647350226,1.10926203050036,0,0,7.04641054403633,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,1.21079900526674,0,0.316462387440884,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.93027971474155,3.36305137788922,7.11137028892708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,9.75227465255847,6.70700859703636,5.4980901592718,10.4817354191524,8.02140657017423,7.67686550492366,12.7245751528176,11.1926020169606,17.3944063581885,7.9822583086523,10.7158438545614,9.23402482258874,1.09288586487763,1.85392221392215,0.324547393654683,0.348259474598534,0.26591592103773,3.57735936458013,6.29194401858141,4.08603251462521,3.9752481473341,0,3.12426451446835,0,2.09749718104953,1.92582629358047,2.08994966536811,0.775250277507987,4.62496141492723,0.33472061276467,0,0,0,0.367663080345869,1.62028389576352,11.16246603551,4.26605807989723,5.63057402416611,4.5994991239765,3.79706263827252,2.38162267109529,0,0,1.3082821564276,7.45457927542978,6.45815609489357,11.9168262731897,13.1944845544454,8.15737279056221,7.8494864019923,3.20246987189115,3.45334567784024,15.2493407345885,9.16032570073879,8.66348086501331,8.62737337576109,4.60940739583999,5.62371436401112,9.05264222807929,5.70471821544449,7.77133138869366,13.504967344033,13.597327326923,14.1855314769271,13.6783294740778,11.7920944619297,12.0891163975646,11.8800285728205,8.90160945402805,3.64064544775211,1.43723628363248,17.1702836233148,16.8910001827152,14.9614622361459,6.58466431321257,5.51678032438235,6.76071265079686,6.57906662328122,8.79009214875424,14.308345050844,10.8085269591377,7.80236849819446,9.37778016069794,12.1091053821446,7.44467425326359,8.77636927654584,6.04109431999431,14.6411589061586,14.2677342895564,14.3864990568743,10.6502877754984,8.2616720546665,7.12154487704048,1.93260853163297,1.63647672354501,2.86804595389004,14.3928973232923,14.3132149787204,11.9679761155604,12.5429876568598,7.56962552626885,17.153935876564,10.9514672630871,6.43240938192885,4.14404764057442,11.6091982007995,7.21879481669586,9.93777120334689,7.75489574359268,8.19437501603839,8.49263590039433,8.27941887551143,7.82993043066619,9.70785418753184,8.24130153526453,8.84918460976698,2.95262181849859,1.40241773803446,3.2925920906512,1.47008711385542,1.26755034821831,0,2.95394953340702,0,0.983907508344908,6.17644117074692,2.41450627898976,0,4.92591964816991,8.05519472879207,2.93227474779292,2.07986957055916,0,7.76733713333015,7.98379120803587,0,0,0,0,0,0.246217006087397,0.234004265139238,0,1.87467667973554,2.18376766658517,3.96970272278682,4.03013352162817,6.1033127087932,1.91691339582606,0.492663237895943,1.49682337822484,1.03664057770386,2.30591925467138,1.38866676769018,7.61974731506028,9.54971063895694,3.51652341630141,1.71072446022705,10.5912317484423,1.8020583470635,11.7188837378537,6.2793407233402,6.97536110133248,12.0274788746358,12.79789986002,3.57656445851882,8.45302752556,9.57377219705534,7.28052058379563,4.11531798819427,1.41849132023278,1.5985330740966,9.86548156241218,2.17048642156577,0,9.77208552881205,10.3063665135338,7.91951872933429,7.83742380354924,2.61460037580088,7.99783929456456,0,0,0,8.62649479769697,8.04033550838797,7.13184525203592,5.79125226670317,11.0957214177207,9.66929201495436,0,0,0.215627574859517,0,10.1637849688985,1.30139853857622,3.86644406388848,3.18280904135263,2.55175500661265,0,0,0,11.6556917133183,3.00102312635806,8.68048075839154,14.3499894456257,11.2410262942212,16.4010511635292,13.471262724162,7.52365249319297,0,3.10419213877515,11.9560607736379,3.87175253937577,14.5095636161698,3.52442083432933,3.77457766191941,0.206768026122887,0,0,0.303127571446259,0,2.41912234663744,8.93188108147597,9.20771839728375,5.3325417942284,11.2762451345017,7.67560873600055,11.903190164627,5.93672265779964,5.85996836450091,6.92490728721196,10.758657437809,7.2695620085707,7.20504346451747,2.65890789101569,2.6065841139427,3.77532054637175,8.4962691641809,8.37619372830898,5.76947425821466,1.80479845162965,2.46449078734127,0,0,3.58875538235777,0,1.53084334748864,3.45465465763423,0,4.06419656315779,1.00337954770971,2.80363900349542,0,1.34324852833307,5.92001666944023,3.13722541229881,10.514455129772,4.92021968549559,7.80908147194327,4.32772248920434,11.2630441726562,17.0794664835617,5.16838984196555,1.30012049207304,4.82051789532479,12.0838397865152,14.4805700087766,12.5873013275426,15.575532690752,21.8063097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| ||
|short_description=p2@FAM13A | |||
}} | }} |
Latest revision as of 08:24, 19 September 2015
Short description: | p2@FAM13A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM13A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000264344, ENST00000509094, ENST00000511976, ENST00000512339, NM_014883, uc003hse.1, uc003hsf.1, uc003hsi.2, uc003hsj.2_5end |
EntrezGene: | FAM13A |
HGNC: | 19367 |
UniProt: | O94988D6RFM4E9PGM7D6RCC1Q6P521 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.89e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
surface structure | 8.78e-10 | 99 |
ectoderm-derived structure | 1.04e-07 | 171 |
ectoderm | 1.04e-07 | 171 |
presumptive ectoderm | 1.04e-07 | 171 |