FFCP PHASE1:Hg19::chr5:130727811..130727824,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:130727811..130727824,+ to FFCP PHASE1:Hg19::chr5:130727811..130727824,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56990 | |EntrezGene=56990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18547 | |HGNC=18547 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-69bp_to_ENST00000506929_5end | |||
|cluster_id=chr5:130727811..130727824,+ | |||
|description=CAGE_peak_12_at_CDC42SE2_5end | |||
|id=chr5:130727811..130727824,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.17e-11!172;CL:0000566!5.17e-11!172;CL:0000738!1.42e-10!140;CL:0002087!1.84e-10!119;CL:0000988!2.83e-10!182;CL:0002032!1.60e-09!165;CL:0000837!1.60e-09!165;CL:0000542!6.58e-09!53;CL:0000051!6.58e-09!53;CL:0002031!1.24e-08!124;CL:0000838!1.81e-08!52 | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.92e-07,3;CL:0000825,1.92e-07,3;CL:0000838,3.59e-07,52;CL:0000542,5.29e-07,53;CL:0000051,5.29e-07,53;CL:0002087,9.28e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.91e-12!34;UBERON:0003528!2.91e-12!34;UBERON:0002780!3.53e-12!41;UBERON:0001890!3.53e-12!41;UBERON:0006240!3.53e-12!41;UBERON:0001049!9.37e-12!57;UBERON:0005068!9.37e-12!57;UBERON:0006241!9.37e-12!57;UBERON:0007135!9.37e-12!57;UBERON:0003080!1.29e-11!42;UBERON:0002791!4.55e-11!33;UBERON:0001893!1.82e-10!34;UBERON:0002616!6.63e-10!59;UBERON:0001869!8.06e-10!32;UBERON:0007023!1.59e-09!115;UBERON:0001017!4.97e-08!82;UBERON:0002420!6.06e-08!9;UBERON:0007245!6.06e-08!9;UBERON:0010009!6.06e-08!9;UBERON:0010011!6.06e-08!9;UBERON:0000454!6.06e-08!9;UBERON:0002619!6.28e-08!22;UBERON:0002308!1.08e-07!9;UBERON:0000125!1.08e-07!9;UBERON:0000955!1.72e-07!69;UBERON:0006238!1.72e-07!69;UBERON:0005743!4.85e-07!86;UBERON:0000956!5.74e-07!25;UBERON:0000203!5.74e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.38e-11;41!UBERON:0001890;3.38e-11;41!UBERON:0001876;3.80e-11;2!UBERON:0001875;9.39e-11;2!UBERON:0006514;9.39e-11;2!UBERON:0000349;1.09e-09;5!UBERON:0002619;2.16e-09;22!UBERON:0003528;3.19e-09;34!UBERON:0002020;3.19e-09;34!UBERON:0002791;3.78e-09;32!UBERON:0001869;3.78e-09;32!UBERON:0002420;5.33e-09;9!UBERON:0007245;5.33e-09;9!UBERON:0010009;5.33e-09;9!UBERON:0010011;5.33e-09;9!UBERON:0000454;5.33e-09;9!UBERON:0000073;7.32e-09;53!UBERON:0002616;7.32e-09;53!UBERON:0000956;3.39e-08;25!UBERON:0000203;3.39e-08;25!UBERON:0001893;8.52e-08;34!UBERON:0001950;1.16e-07;20!UBERON:0001871;7.99e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.55e-15,56;UBERON:0005068,1.55e-15,56;UBERON:0006241,1.55e-15,56;UBERON:0007135,1.55e-15,56;UBERON:0000073,2.50e-14,53;UBERON:0002616,2.50e-14,53;UBERON:0002780,4.80e-14,41;UBERON:0001890,4.80e-14,41;UBERON:0003080,4.80e-14,41;UBERON:0006240,4.80e-14,41;UBERON:0003528,4.97e-12,34;UBERON:0002020,4.97e-12,34;UBERON:0001876,3.82e-11,2;UBERON:0001875,1.29e-10,2;UBERON:0006514,1.29e-10,2;UBERON:0002791,2.09e-10,32;UBERON:0001869,2.09e-10,32;UBERON:0000955,2.32e-10,68;UBERON:0006238,2.32e-10,68;UBERON:0001893,1.01e-09,34;UBERON:0000349,1.09e-09,5;UBERON:0001017,1.22e-09,81;UBERON:0003075,1.22e-09,82;UBERON:0007284,1.22e-09,82;UBERON:0002619,1.49e-09,22;UBERON:0002346,4.76e-09,86;UBERON:0002420,6.12e-09,9;UBERON:0007245,6.12e-09,9;UBERON:0010009,6.12e-09,9;UBERON:0010011,6.12e-09,9;UBERON:0000454,6.12e-09,9;UBERON:0003056,1.02e-08,61;UBERON:0001016,2.19e-08,89;UBERON:0000956,2.45e-08,25;UBERON:0000203,2.45e-08,25;UBERON:0007023,2.81e-08,114;UBERON:0001950,8.23e-08,20;UBERON:0010371,5.80e-07,104;UBERON:0001871,6.37e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0,0,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0.802177789880567,2.38711957787437,0,0,0,0.581592955118259,0.377875943688809,0.485168122375632,0.697287110717054,0.411167888021826,0,0.575384784644301,1.0246428261164,0.47296445977717,0.344745680736619,0.645484683583826,0,0.376484679085209,0,0,0,0,0,0.329851300186716,1.39624560335142,0.426224750532694,0.580418477257168,0,0,1.50749199154046,2.08593167368081,0.434377689410233,0,0,0,0,0.212604299965044,0.209658645508376,0.112328631146495,0,0,0,0,0,0,1.09227722252426,0,0.426730222566507,0.800791974072025,1.14950487990897,0,0,0.569212969109448,1.17447437874188,1.52909291250092,0,0,0.263384084775077,0.196709770113833,1.96505381374582,2.67281948699362,0,0,0,0,0.445641827540694,0,0.221533894583621,0.812411591295047,0.896639238079726,1.56071217071854,0.822189523018381,1.38175008892924,0.289803085735052,0.296573126324121,0,2.09071047609954,0.226618685395132,0,0.34362744548263,0,0.318565414324097,0.651083453856419,0,0.301150238155546,0.383959833463255,0,0,0.821127996921047,1.00803371612366,0.802320587350522,2.02754165435919,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0.576479813667846,0.37872730027914,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0,0,0,0.560425719967636,0.591092280605782,1.50939302401662,2.95188983443421,0.254094624222463,0,0,0,0,0,0,1.24324654030811,0,0,0.271265023699736,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.320182673410333,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822724546172388,0.648473311192717,0,0.79312517629427,0.106824071127473,0,0,0.557409525377156,0.144269212976445,0.142283686696828,0.159426272728822,0.199579371432817,0,0.423347165447766,0,0.280797178113459,0.228234679033192,0.156679895773023,2.50634477090067,0.169291777801603,0,0.201799707191048,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0.270455678475983,0,1.4098700508785,0.37428108081644,0,0,0,0.284136146806413,0.47748896947538,0,0,3.97659059106519,3.09472716103128,0.111308705022906,0.824019371133798,1.05562704063997,0.398495976502139,0.276283915531148,0.251932747854276,0,0.246169610922139,0,0.0898683511473268,0,0,0.197286811273867,4.7896618469388,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0.709163045303809,0.689486746482929,0.583209226766509,0,0.885741385813839,0.723578631752448,0,0,0.295547618953547,0.87754158861589,0.10893846351899,0.139423744278603,0.153900517007594,0,0.23056390438806,0,1.08647371922008,0,0,0,0,0,0.332423363800313,0,0,0.167821586975843,0,0,0.210998064528027,0,0.141353071433941,0,0.995261931078505,0.0884575645033392,4.888241159469,0.296521128680622,0.247127877893006,0,0.134802265961354,0,1.40558667435203,0.182454789215666,0,0,0,0,0.30607276163049,0.126373159256976,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0.173559738335131,0,0.0870592065804026,0.17472666824203,0.171986032471617,0,0,0,0,0.0882561266915003,0.225980740780532,0,0.19871461170299,0.0633107959558787,0.977756913674015,0,0,0,0,0,0.171594997861965,0.288109595976299,0,0,0.271808412147228,0,0,0,6.00420288709789,1.09524303113594,0,0,0.525774708558629,0,0,0.717873024576814,0.399358000997982,0,0.223171457441873,0,0.360299883542404,0,0.0787831823072236,0,0.13480708770837,0.0984274815147488,0.0846733320657845,0.795229689809303,3.13267834056624,0.321506296930038,0.137539436597234,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.82092520749339,0,0.226624183040251,0,0,1.93924434542326,0.79339561045614,0.342173675768659,0,0,0,0.414239055347196,0,0.395223263795889,0.365377795142688,0,0,0,0.306345576763462,0,0.157054096250234,0.886068179966986,0.488105059607853,0.625954653532499,1.14681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| ||
|short_description=p12@CDC42SE2 | |||
}} | }} |
Latest revision as of 03:53, 20 September 2015
Short description: | p12@CDC42SE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CDC42SE2_5end |
Coexpression cluster: | NA |
Association with transcript: | -69bp_to_ENST00000506929_5end |
EntrezGene: | CDC42SE2 |
HGNC: | 18547 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.92e-07 | 3 |
pro-NK cell | 1.92e-07 | 3 |
lymphoid lineage restricted progenitor cell | 3.59e-07 | 52 |
lymphocyte | 5.29e-07 | 53 |
common lymphoid progenitor | 5.29e-07 | 53 |
nongranular leukocyte | 9.28e-07 | 115 |