FFCP PHASE1:Hg19::chr5:140890824..140890836,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr5:140890824..140890836,+ to FFCP PHASE1:Hg19::chr5:140890824..140890836,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5098 | |EntrezGene=5098 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8716 | |HGNC=8716 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BT64 | |UniProt=Q9BT64 | ||
|association_with_transcript=299bp_to_BC004321_5end | |||
|cluster_id=chr5:140890824..140890836,+ | |||
|description=CAGE_peak_7_at_PCDHGC3_5end | |||
|id=chr5:140890824..140890836,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.94e-11!180 | |||
|ontology_enrichment_celltype_v019=CL:0002575;2.94e-11;2!CL:0002600;2.94e-11;2!CL:0002567;8.73e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002600,3.46e-11,2;CL:0002575,5.51e-11,2;CL:0002567,6.43e-08,3;CL:0002616,8.67e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006241;8.73e-08;3!UBERON:0003057;8.73e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;4.52e-08;3!DOID:127;4.52e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.77e-08,3;DOID:127,2.77e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.57e-13!57;UBERON:0005068!3.57e-13!57;UBERON:0006241!3.57e-13!57;UBERON:0007135!3.57e-13!57;UBERON:0001017!4.36e-12!82;UBERON:0002780!2.05e-11!41;UBERON:0001890!2.05e-11!41;UBERON:0006240!2.05e-11!41;UBERON:0005743!2.38e-11!86;UBERON:0001893!4.46e-11!34;UBERON:0002616!6.15e-11!59;UBERON:0003080!6.87e-11!42;UBERON:0002791!8.45e-11!33;UBERON:0001869!1.95e-10!32;UBERON:0000955!8.74e-10!69;UBERON:0006238!8.74e-10!69;UBERON:0002020!1.73e-09!34;UBERON:0003528!1.73e-09!34;UBERON:0000073!3.55e-09!94;UBERON:0001016!3.55e-09!94;UBERON:0000956!7.46e-09!25;UBERON:0000203!7.46e-09!25;UBERON:0002346!9.55e-09!90;UBERON:0003075!1.14e-08!86;UBERON:0007284!1.14e-08!86;UBERON:0002619!1.24e-07!22;UBERON:0001950!1.50e-07!20;UBERON:0000475!3.86e-07!365;UBERON:0003056!3.94e-07!61;UBERON:0000033!9.29e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;8.73e-08;3!UBERON:0005174;8.73e-08;3!UBERON:0001137;8.73e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,6.43e-08,3;UBERON:0005174,6.43e-08,3;UBERON:0001137,6.43e-08,3 | |||
|phase1_expression=0.54503513781167,1.07050261945492,0.140954404095971,0,0.893922188854576,1.74467704820074,0,0,0.261185628199839,0,0,0,0,0.495065411840187,1.65698687863958,0.672325146451775,0.602694528023977,1.46062018077475,0.487932798790507,0.123121058076788,0.612002073732759,0.626909442956176,0.286235987131057,0.273748850145768,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.724232594804119,0.795285947051099,0.973269740605272,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.397227542439656,1.14734648299525,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0,0.326923806226917,0.302714855289863,0,0,0.312160076830321,0,0.896692083310806,0,0,0,0.204154171254893,0.122834317311768,0.413303124703062,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,0,0.30648779579902,0.45071417671979,0,0.717558542755448,0.213557388818567,0.211931901159562,0.300091096084402,0.618315175430633,0,0,0,0.389748020644795,0,0.460249493211497,0,1.42003837006646,0.10075209822764,0.339121184620975,0,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,2.57296375277154,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.126995788584338,0.381988425558278,1.17217447210047,1.71072446022705,0.514137463516618,0.600686115687835,0.285826432630578,0.112131084345361,0,0.07333828582095,0,0,0,0,2.08014873822732,0,1.41849132023278,0,0.142977993658148,0.542621605391443,0.823240336780769,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0,0,0,0,0,0.508189248444927,0,2.31986643833309,0.167516265334349,0.637938751653163,0,0,0,0.858840442033979,0.500170521059677,0.542530047399471,0.831883446123229,0.713715955188647,0.473107245101804,0.468565659970853,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0.347534457872331,1.37060810223918,1.02943027143257,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.482561763430822,0,0,0.710246901252508,0.164254312027618,1.03850885836724,0.232420756919918,0.120859449591622,0,0.184161977871793,0.459257792658427,0,0.393373244878272,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0.574265537996172,1.30012049207304,0,0.193341436584244,0.154048617114644,0.614014698904518,0,0.107420244868274,0.290033387828457,0.255679882248303,0.0890320356467374,0,0.192190067365106,0,0.10115778085555,0,0.94443704049192,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0.855877976067841,0.318203247925937,0,0,0.54907405947211,0.235624804691373,0,0,0,0,0.487426979262569,0,0,0.424216295861138,0,0,0,0,1.15755106853338,1.31178950409327,0,0,0,0,0.0982490410131212,0,0,2.11107635297664,0.658589785919804,0,0.699869440489966,0,0,0,0,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.984685914873589,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0.371072392647405,1.99613798001194,0,0,0,0.1137934482855,0,0,0.344743373241465,0,0,0.885741385813839,0.241192877250816,0,0.995213339381022,0.591095237907095,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0.802577647298789,0.234264445725339,0,0,0,0,0,0.61214552326098,0.189559738885464,0,0,0,0,0,0,0,0,0.520679215005393,0.0979923974143777,0,0.52418000472609,0.171986032471617,0,0,0,0.290967049465258,0.0882561266915003,0.451961481561065,0.274083849293502,0,0.126621591911757,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0.271808412147228,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,1.0896272488926,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,1.72844298240254,2.28611152076586,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,4.02686674176478,0.500763722825999,0,0.443716206147409,0.124192805882767,0,0,0,0,0.470531639396343,0,0,0.149254802886874,0,1.10961172300523,0.568209015825267,0.251567901752575,0.889811221596536,0,0.604923695052956,0.310874401165561,0,0,0,0.155262956876259,0,0.797525143673985,1.04349012362347,0.450772826991655,0.380805212168795,0,0.181848659202559,0.322231671127465,0.464033759878494,0,0.400027764663154,0.343395705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| ||
|short_description=p7@PCDHGC3 | |||
}} | }} |
Latest revision as of 04:48, 25 September 2015
Short description: | p7@PCDHGC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PCDHGC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 299bp_to_BC004321_5end |
EntrezGene: | PCDHGC3 |
HGNC: | 8716 |
UniProt: | Q9BT64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of trachea | 3.46e-11 | 2 |
central nervous system pericyte | 5.51e-11 | 2 |
light melanocyte | 6.43e-08 | 3 |
perirenal adipocyte cell | 8.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 6.43e-08 | 3 |
dorsal region element | 6.43e-08 | 3 |
dorsum | 6.43e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.77e-08 | 3 |
leiomyoma | 2.77e-08 | 3 |