FFCP PHASE1:Hg19::chr5:141488079..141488094,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:141488079..141488094,+ to FFCP PHASE1:Hg19::chr5:141488079..141488094,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80762 | |EntrezGene=80762 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17592 | |HGNC=17592 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BT67 | |UniProt=Q9BT67 | ||
|association_with_transcript=9bp_to_ENST00000253814_5end | |||
|cluster_id=chr5:141488079..141488094,+ | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_4_at_NDFIP1_5end | |||
|id=chr5:141488079..141488094,+ | |||
|ontology_enrichment_celltype=CL:0000624!7.79e-12!6;CL:0000791!2.23e-10!18;CL:0000789!2.23e-10!18;CL:0002420!2.23e-10!18;CL:0002419!2.23e-10!18;CL:0000790!2.23e-10!18;CL:0000084!4.24e-09!25;CL:0000827!4.24e-09!25 | |||
|ontology_enrichment_celltype_v019=CL:0000624;4.18e-29;6!CL:0000791;2.05e-20;18!CL:0000789;2.05e-20;18!CL:0002419;2.05e-20;18!CL:0000898;2.07e-15;3!CL:0000623;8.75e-15;3!CL:0000226;1.88e-14;3!CL:0000842;1.88e-14;3!CL:0000084;3.15e-14;25!CL:0000815;8.33e-11;2!CL:0000792;8.33e-11;2!CL:0002677;8.33e-11;2!CL:0001014;1.96e-10;2!CL:0001016;1.96e-10;2!CL:0002393;2.40e-07;6!CL:0002397;2.40e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,4.41e-29,6;CL:0000791,2.10e-20,18;CL:0000789,2.10e-20,18;CL:0002420,2.10e-20,18;CL:0002419,2.10e-20,18;CL:0000790,2.10e-20,18;CL:0000898,2.12e-15,3;CL:0000623,7.27e-15,3;CL:0000825,7.27e-15,3;CL:0000226,1.76e-14,3;CL:0000842,1.76e-14,3;CL:0000084,3.20e-14,25;CL:0000827,3.20e-14,25;CL:0000738,8.69e-13,136;CL:0000037,1.20e-12,168;CL:0000988,1.04e-11,177;CL:0000838,7.63e-11,52;CL:0000815,8.55e-11,2;CL:0000792,8.55e-11,2;CL:0002677,8.55e-11,2;CL:0000542,1.36e-10,53;CL:0000051,1.36e-10,53;CL:0001014,1.92e-10,2;CL:0001016,1.92e-10,2;CL:0002032,6.61e-10,161;CL:0000837,6.61e-10,161;CL:0002087,4.50e-09,115;CL:0002031,1.55e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000790;2.05e-20;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.07e-35!57;UBERON:0005068!1.07e-35!57;UBERON:0006241!1.07e-35!57;UBERON:0007135!1.07e-35!57;UBERON:0002616!3.69e-32!59;UBERON:0002780!1.36e-29!41;UBERON:0001890!1.36e-29!41;UBERON:0006240!1.36e-29!41;UBERON:0003080!1.15e-28!42;UBERON:0000955!7.39e-27!69;UBERON:0006238!7.39e-27!69;UBERON:0001017!2.49e-26!82;UBERON:0005743!9.15e-26!86;UBERON:0003075!2.66e-24!86;UBERON:0007284!2.66e-24!86;UBERON:0000073!3.55e-23!94;UBERON:0001016!3.55e-23!94;UBERON:0002346!1.25e-22!90;UBERON:0002020!1.38e-21!34;UBERON:0003528!1.38e-21!34;UBERON:0001893!1.59e-21!34;UBERON:0003056!1.39e-20!61;UBERON:0002791!2.17e-20!33;UBERON:0007023!5.64e-20!115;UBERON:0001869!1.26e-19!32;UBERON:0000153!3.13e-14!129;UBERON:0007811!3.13e-14!129;UBERON:0002619!4.46e-14!22;UBERON:0001950!5.54e-14!20;UBERON:0000956!1.87e-13!25;UBERON:0000203!1.87e-13!25;UBERON:0000033!6.32e-13!123;UBERON:0002308!3.38e-10!9;UBERON:0000125!3.38e-10!9;UBERON:0001894!3.58e-10!7;UBERON:0006222!3.58e-10!7;UBERON:0004121!5.08e-09!169;UBERON:0004733!1.04e-08!12;UBERON:0002028!1.04e-08!12;UBERON:0007277!1.04e-08!12;UBERON:0000924!1.53e-08!173;UBERON:0006601!1.53e-08!173;UBERON:0003076!3.21e-08!15;UBERON:0003057!3.21e-08!15;UBERON:0002420!6.35e-08!9;UBERON:0007245!6.35e-08!9;UBERON:0010009!6.35e-08!9;UBERON:0010011!6.35e-08!9;UBERON:0000454!6.35e-08!9;UBERON:0009663!6.38e-08!7;UBERON:0004732!6.74e-08!13;UBERON:0002680!2.19e-07!9;UBERON:0001895!2.19e-07!9;UBERON:0010092!2.19e-07!9;UBERON:0000369!3.98e-07!4;UBERON:0002435!3.98e-07!4;UBERON:0000204!3.98e-07!4;UBERON:0010082!3.98e-07!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@NDFIP1 | |||
}} | }} |
Latest revision as of 06:03, 25 September 2015
Short description: | p4@NDFIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NDFIP1_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 9bp_to_ENST00000253814_5end |
EntrezGene: | NDFIP1 |
HGNC: | 17592 |
UniProt: | Q9BT67 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 4.41e-29 | 6 |
mature alpha-beta T cell | 2.10e-20 | 18 |
alpha-beta T cell | 2.10e-20 | 18 |
immature T cell | 2.10e-20 | 18 |
mature T cell | 2.10e-20 | 18 |
immature alpha-beta T cell | 2.10e-20 | 18 |
naive T cell | 2.12e-15 | 3 |
natural killer cell | 7.27e-15 | 3 |
pro-NK cell | 7.27e-15 | 3 |
single nucleate cell | 1.76e-14 | 3 |
mononuclear cell | 1.76e-14 | 3 |
T cell | 3.20e-14 | 25 |
pro-T cell | 3.20e-14 | 25 |
leukocyte | 8.69e-13 | 136 |
hematopoietic stem cell | 1.20e-12 | 168 |
hematopoietic cell | 1.04e-11 | 177 |
lymphoid lineage restricted progenitor cell | 7.63e-11 | 52 |
regulatory T cell | 8.55e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 8.55e-11 | 2 |
naive regulatory T cell | 8.55e-11 | 2 |
lymphocyte | 1.36e-10 | 53 |
common lymphoid progenitor | 1.36e-10 | 53 |
CD1a-positive Langerhans cell | 1.92e-10 | 2 |
immature CD1a-positive Langerhans cell | 1.92e-10 | 2 |
hematopoietic oligopotent progenitor cell | 6.61e-10 | 161 |
hematopoietic multipotent progenitor cell | 6.61e-10 | 161 |
nongranular leukocyte | 4.50e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.55e-08 | 120 |