FFCP PHASE1:Hg19::chr5:41213522..41213531,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=729 | |EntrezGene=729 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1339 | |HGNC=1339 | ||
|TSSclassifier=strong | |||
|UniProt=P13671 | |UniProt=P13671 | ||
|association_with_transcript=80bp_to_ENST00000337836_5end | |||
|cluster_id=chr5:41213522..41213531,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_6_at_C6_5end | |||
|id=chr5:41213522..41213531,- | |||
|ontology_enrichment_celltype=CL:0000181!2.22e-08!12;CL:0000417!2.22e-08!12;CL:0000668!2.22e-08!12;CL:0000414!2.22e-08!12;CL:0000412!2.22e-08!12;CL:0000182!2.22e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.57e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.57e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.48e-12;1!UBERON:0010227;2.20e-12;1!UBERON:0006242;3.64e-12;1!UBERON:0004161;1.04e-09;11!UBERON:0009497;2.71e-08;13 | |||
|ontology_enrichment_disease=DOID:114!4.40e-13!2;DOID:178!3.02e-07!1;DOID:326!3.02e-07!1;DOID:3978!3.02e-07!1;DOID:3394!3.02e-07!1;DOID:5844!3.02e-07!1;DOID:1287!5.86e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:114;7.19e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.20e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.30e-11!115;UBERON:0009497!3.33e-11!25;UBERON:0000015!3.33e-11!25;UBERON:0002423!3.33e-11!25;UBERON:0006235!3.33e-11!25;UBERON:0004161!3.33e-11!25;UBERON:0002107!3.34e-11!19;UBERON:0006925!3.34e-11!19;UBERON:0008836!3.34e-11!19;UBERON:0005057!1.28e-10!26;UBERON:0007100!5.41e-10!27;UBERON:0002417!7.69e-10!61;UBERON:0000916!7.69e-10!61;UBERON:0008835!1.36e-09!22;UBERON:0003894!1.36e-09!22;UBERON:0005172!3.59e-09!55;UBERON:0005173!3.59e-09!55;UBERON:0004151!3.62e-09!3;UBERON:0009854!3.78e-09!23;UBERON:0002300!5.62e-09!3;UBERON:0003978!1.29e-08!3;UBERON:0009751!1.29e-08!3;UBERON:0000946!1.29e-08!3;UBERON:0002523!1.29e-08!3;UBERON:0005983!1.29e-08!3;UBERON:0002165!1.29e-08!3;UBERON:0002062!1.29e-08!3;UBERON:0007280!1.29e-08!3;UBERON:0007499!2.28e-08!25;UBERON:0009856!5.05e-08!26;UBERON:0002084!1.44e-07!1;UBERON:0002082!1.44e-07!1;UBERON:0004706!1.44e-07!1;UBERON:0000466!1.63e-07!126;UBERON:0009569!1.70e-07!113;UBERON:0002079!1.97e-07!1;UBERON:0002135!4.34e-07!1;UBERON:0002146!4.60e-07!1;UBERON:0005623!4.60e-07!1;UBERON:0001301!5.19e-07!1;UBERON:0002363!5.50e-07!1;UBERON:0007647!5.50e-07!1;UBERON:0010115!5.50e-07!1;UBERON:0005177!6.89e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;6.79e-16;25!UBERON:0004151;8.76e-16;3!UBERON:0002107;6.33e-15;19!UBERON:0006925;6.33e-15;19!UBERON:0002084;1.48e-12;1!UBERON:0002082;1.48e-12;1!UBERON:0002079;2.20e-12;1!UBERON:0002108;7.60e-10;4!UBERON:0002365;4.18e-09;31!UBERON:0002330;4.18e-09;31!UBERON:0002368;6.30e-08;33!UBERON:0000949;1.36e-07;43!UBERON:0007100;2.70e-07;25!UBERON:0005172;4.04e-07;52!UBERON:0005173;4.04e-07;52!UBERON:0002081;8.06e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,6.88e-16,25;UBERON:0000015,6.88e-16,25;UBERON:0002423,6.88e-16,25;UBERON:0006235,6.88e-16,25;UBERON:0004161,6.88e-16,25;UBERON:0004151,9.09e-16,3;UBERON:0002107,6.33e-15,19;UBERON:0006925,6.33e-15,19;UBERON:0008836,6.33e-15,19;UBERON:0008835,7.02e-13,22;UBERON:0003894,7.02e-13,22;UBERON:0002084,1.40e-12,1;UBERON:0002082,1.40e-12,1;UBERON:0010226,1.40e-12,1;UBERON:0002079,2.46e-12,1;UBERON:0009854,2.57e-12,23;UBERON:0007499,2.53e-11,25;UBERON:0009856,6.96e-11,26;UBERON:0002108,7.77e-10,4;UBERON:0005172,1.50e-09,54;UBERON:0005173,1.50e-09,54;UBERON:0002365,4.15e-09,31;UBERON:0002330,4.15e-09,31;UBERON:0000949,1.01e-08,45;UBERON:0002417,1.58e-08,60;UBERON:0000916,1.58e-08,60;UBERON:0002368,4.74e-08,35;UBERON:0003929,3.84e-07,54;UBERON:0002081,8.52e-07,2;UBERON:0010227,8.52e-07,2;UBERON:0007100,9.13e-07,27 | |||
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|short_description=p6@C6 | |||
}} | }} |
Latest revision as of 22:39, 17 September 2015
Short description: | p6@C6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_C6_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 80bp_to_ENST00000337836_5end |
EntrezGene: | C6 |
HGNC: | 1339 |
UniProt: | P13671 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.57e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 6.88e-16 | 25 |
anatomical boundary | 6.88e-16 | 25 |
hepatobiliary system | 6.88e-16 | 25 |
foregut-midgut junction | 6.88e-16 | 25 |
septum transversum | 6.88e-16 | 25 |
cardiac chamber | 9.09e-16 | 3 |
liver | 6.33e-15 | 19 |
digestive gland | 6.33e-15 | 19 |
liver bud | 6.33e-15 | 19 |
hepatic diverticulum | 7.02e-13 | 22 |
liver primordium | 7.02e-13 | 22 |
heart left ventricle | 1.40e-12 | 1 |
cardiac ventricle | 1.40e-12 | 1 |
future cardiac ventricle | 1.40e-12 | 1 |
left cardiac atrium | 2.46e-12 | 1 |
digestive tract diverticulum | 2.57e-12 | 23 |
epithelial sac | 2.53e-11 | 25 |
sac | 6.96e-11 | 26 |
small intestine | 7.77e-10 | 4 |
abdomen element | 1.50e-09 | 54 |
abdominal segment element | 1.50e-09 | 54 |
exocrine gland | 4.15e-09 | 31 |
exocrine system | 4.15e-09 | 31 |
endocrine system | 1.01e-08 | 45 |
abdominal segment of trunk | 1.58e-08 | 60 |
abdomen | 1.58e-08 | 60 |
endocrine gland | 4.74e-08 | 35 |
gut epithelium | 3.84e-07 | 54 |
cardiac atrium | 8.52e-07 | 2 |
future cardiac atrium | 8.52e-07 | 2 |
primary circulatory organ | 9.13e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.20e-07 | 2 |