FFCP PHASE1:Hg19::chr5:53606375..53606394,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:53606375..53606394,- to FFCP PHASE1:Hg19::chr5:53606375..53606394,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54622 | |EntrezGene=54622 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25945 | |HGNC=25945 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NXU5 | |UniProt=Q9NXU5 | ||
|association_with_transcript=8bp_to_ENST00000504924,ENST00000505383,NM_019087,uc003jpg.1,uc010ivs.1_5end | |||
|cluster_id=chr5:53606375..53606394,- | |||
|coexpression_cluster_id=C4505 | |||
|description=CAGE_peak_2_at_ARL15_5end | |||
|id=chr5:53606375..53606394,- | |||
|ontology_enrichment_celltype=CL:0000766!1.60e-14!76;CL:0000839!1.55e-12!70;CL:0000763!5.06e-11!112;CL:0000049!5.06e-11!112;CL:0002194!7.83e-11!63;CL:0000576!7.83e-11!63;CL:0000040!7.83e-11!63;CL:0000559!7.83e-11!63;CL:0000557!1.21e-10!71;CL:0002009!3.73e-10!65;CL:0000738!1.27e-09!140;CL:0000037!4.10e-09!172;CL:0000566!4.10e-09!172;CL:0002057!4.43e-09!42;CL:0002032!5.41e-09!165;CL:0000837!5.41e-09!165;CL:0002031!1.18e-08!124;CL:0002087!4.88e-08!119;CL:0000860!9.19e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.72e-09;39!CL:0000234;7.72e-09;39!CL:0000860;1.82e-07;33!CL:0002057;1.82e-07;33!CL:0000766;3.21e-07;69!CL:0000576;8.15e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.24e-16,72;CL:0000839,6.06e-14,66;CL:0002194,3.43e-12,59;CL:0000576,3.43e-12,59;CL:0000040,3.43e-12,59;CL:0000559,3.43e-12,59;CL:0000473,5.60e-12,48;CL:0000234,5.60e-12,48;CL:0000763,6.16e-12,108;CL:0000049,6.16e-12,108;CL:0000557,6.72e-12,67;CL:0002009,2.06e-11,61;CL:0000738,2.79e-10,136;CL:0000037,1.12e-09,168;CL:0002032,1.45e-09,161;CL:0000837,1.45e-09,161;CL:0002031,2.60e-09,120;CL:0000860,4.40e-09,42;CL:0002057,4.40e-09,42;CL:0002087,1.12e-08,115;CL:0000988,3.14e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;6.71e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.67e-35!115;UBERON:0001017!2.65e-12!82;UBERON:0005743!5.67e-12!86;UBERON:0001049!1.23e-11!57;UBERON:0005068!1.23e-11!57;UBERON:0006241!1.23e-11!57;UBERON:0007135!1.23e-11!57;UBERON:0003080!3.05e-11!42;UBERON:0002780!1.01e-10!41;UBERON:0001890!1.01e-10!41;UBERON:0006240!1.01e-10!41;UBERON:0002193!3.86e-10!112;UBERON:0002390!9.26e-10!102;UBERON:0003061!9.26e-10!102;UBERON:0000955!9.52e-10!69;UBERON:0006238!9.52e-10!69;UBERON:0000073!1.04e-09!94;UBERON:0001016!1.04e-09!94;UBERON:0002616!1.75e-09!59;UBERON:0002619!4.17e-09!22;UBERON:0002020!1.06e-08!34;UBERON:0003528!1.06e-08!34;UBERON:0001893!2.80e-08!34;UBERON:0001869!3.88e-08!32;UBERON:0001950!4.13e-08!20;UBERON:0002791!4.65e-08!33;UBERON:0001474!2.85e-07!86;UBERON:0002371!3.57e-07!80;UBERON:0000956!7.22e-07!25;UBERON:0000203!7.22e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;8.64e-10;114!UBERON:0002619;4.42e-09;22!UBERON:0001950;4.38e-08;20!UBERON:0002780;5.00e-08;41!UBERON:0001890;5.00e-08;41!UBERON:0002791;2.01e-07;32!UBERON:0003528;2.11e-07;34!UBERON:0002020;2.11e-07;34!UBERON:0001869;2.16e-07;32!UBERON:0001893;6.78e-07;34!UBERON:0000956;7.19e-07;25!UBERON:0000203;7.19e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.41e-34,114;UBERON:0001017,7.90e-12,81;UBERON:0001049,4.04e-11,56;UBERON:0005068,4.04e-11,56;UBERON:0006241,4.04e-11,56;UBERON:0007135,4.04e-11,56;UBERON:0002193,5.20e-11,108;UBERON:0002780,9.99e-11,41;UBERON:0001890,9.99e-11,41;UBERON:0003080,9.99e-11,41;UBERON:0006240,9.99e-11,41;UBERON:0002390,1.13e-10,98;UBERON:0003061,1.13e-10,98;UBERON:0000073,6.66e-10,53;UBERON:0002616,6.66e-10,53;UBERON:0001016,1.66e-09,89;UBERON:0000955,2.69e-09,68;UBERON:0006238,2.69e-09,68;UBERON:0002619,4.14e-09,22;UBERON:0002405,4.40e-09,93;UBERON:0003528,1.04e-08,34;UBERON:0002020,1.04e-08,34;UBERON:0001893,2.77e-08,34;UBERON:0002791,3.24e-08,32;UBERON:0001869,3.83e-08,32;UBERON:0001950,4.11e-08,20;UBERON:0001474,4.32e-08,82;UBERON:0002371,5.01e-08,76;UBERON:0000956,7.14e-07,25;UBERON:0000203,7.14e-07,25;UBERON:0004765,9.95e-07,90 | |||
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| ||
|short_description=p2@ARL15 | |||
}} | }} |
Latest revision as of 03:09, 18 September 2015
Short description: | p2@ARL15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARL15_5end |
Coexpression cluster: | C4505_acute_pineal_skin_occipital_parietal_colon_brain |
Association with transcript: | 8bp_to_ENST00000504924, ENST00000505383, NM_019087, uc003jpg.1, uc010ivs.1_5end |
EntrezGene: | ARL15 |
HGNC: | 25945 |
UniProt: | Q9NXU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.24e-16 | 72 |
myeloid lineage restricted progenitor cell | 6.06e-14 | 66 |
monopoietic cell | 3.43e-12 | 59 |
monocyte | 3.43e-12 | 59 |
monoblast | 3.43e-12 | 59 |
promonocyte | 3.43e-12 | 59 |
defensive cell | 5.60e-12 | 48 |
phagocyte | 5.60e-12 | 48 |
myeloid cell | 6.16e-12 | 108 |
common myeloid progenitor | 6.16e-12 | 108 |
granulocyte monocyte progenitor cell | 6.72e-12 | 67 |
macrophage dendritic cell progenitor | 2.06e-11 | 61 |
leukocyte | 2.79e-10 | 136 |
hematopoietic stem cell | 1.12e-09 | 168 |
hematopoietic oligopotent progenitor cell | 1.45e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.45e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 2.60e-09 | 120 |
classical monocyte | 4.40e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.40e-09 | 42 |
nongranular leukocyte | 1.12e-08 | 115 |
hematopoietic cell | 3.14e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.41e-34 | 114 |
central nervous system | 7.90e-12 | 81 |
neural tube | 4.04e-11 | 56 |
neural rod | 4.04e-11 | 56 |
future spinal cord | 4.04e-11 | 56 |
neural keel | 4.04e-11 | 56 |
hemolymphoid system | 5.20e-11 | 108 |
regional part of forebrain | 9.99e-11 | 41 |
forebrain | 9.99e-11 | 41 |
anterior neural tube | 9.99e-11 | 41 |
future forebrain | 9.99e-11 | 41 |
hematopoietic system | 1.13e-10 | 98 |
blood island | 1.13e-10 | 98 |
regional part of nervous system | 6.66e-10 | 53 |
regional part of brain | 6.66e-10 | 53 |
nervous system | 1.66e-09 | 89 |
brain | 2.69e-09 | 68 |
future brain | 2.69e-09 | 68 |
regional part of cerebral cortex | 4.14e-09 | 22 |
immune system | 4.40e-09 | 93 |
brain grey matter | 1.04e-08 | 34 |
gray matter | 1.04e-08 | 34 |
telencephalon | 2.77e-08 | 34 |
regional part of telencephalon | 3.24e-08 | 32 |
cerebral hemisphere | 3.83e-08 | 32 |
neocortex | 4.11e-08 | 20 |
bone element | 4.32e-08 | 82 |
bone marrow | 5.01e-08 | 76 |
cerebral cortex | 7.14e-07 | 25 |
pallium | 7.14e-07 | 25 |
skeletal element | 9.95e-07 | 90 |