FFCP PHASE1:Hg19::chr6:12012170..12012245,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:12012170..12012245,+ to FFCP PHASE1:Hg19::chr6:12012170..12012245,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3096 | |EntrezGene=3096 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4920 | |HGNC=4920 | ||
|TSSclassifier=strong | |||
|UniProt=C9J2N3 | |UniProt=C9J2N3 | ||
|association_with_transcript=0bp_to_ENST00000487103_5end | |||
|cluster_id=chr6:12012170..12012245,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_HIVEP1_5end | |||
|id=chr6:12012170..12012245,+ | |||
|ontology_enrichment_celltype=CL:0000738!8.96e-28!140;CL:0002057!4.45e-26!42;CL:0000860!2.02e-23!45;CL:0000766!4.72e-23!76;CL:0000557!6.22e-20!71;CL:0002031!5.15e-19!124;CL:0002087!1.23e-18!119;CL:0002009!6.38e-18!65;CL:0000839!7.79e-18!70;CL:0002194!7.63e-17!63;CL:0000576!7.63e-17!63;CL:0000040!7.63e-17!63;CL:0000559!7.63e-17!63;CL:0000037!1.26e-16!172;CL:0000566!1.26e-16!172;CL:0000988!6.32e-15!182;CL:0002032!1.20e-14!165;CL:0000837!1.20e-14!165;CL:0000763!4.34e-12!112;CL:0000049!4.34e-12!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.68e-20;33!CL:0002057;3.68e-20;33!CL:0000473;1.31e-15;39!CL:0000234;1.31e-15;39!CL:0000576;5.34e-15;48!CL:0000766;3.02e-13;69!CL:0002087;5.04e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.05e-28,136;CL:0000860,4.37e-26,42;CL:0002057,4.37e-26,42;CL:0000766,1.31e-24,72;CL:0000473,1.49e-24,48;CL:0000234,1.49e-24,48;CL:0000557,2.18e-21,67;CL:0002031,9.21e-20,120;CL:0002087,2.12e-19,115;CL:0002009,2.35e-19,61;CL:0000839,3.62e-19,66;CL:0002194,3.08e-18,59;CL:0000576,3.08e-18,59;CL:0000040,3.08e-18,59;CL:0000559,3.08e-18,59;CL:0000037,3.51e-17,168;CL:0000988,2.18e-15,177;CL:0002032,3.63e-15,161;CL:0000837,3.63e-15,161;CL:0000763,8.89e-13,108;CL:0000049,8.89e-13,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.97e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.59e-24!102;UBERON:0003061!8.59e-24!102;UBERON:0002193!3.20e-23!112;UBERON:0002371!2.67e-17!80;UBERON:0001474!4.14e-16!86;UBERON:0002405!1.24e-15!115;UBERON:0004765!1.90e-13!101;UBERON:0001434!1.90e-13!101;UBERON:0007023!1.82e-07!115;UBERON:0000178!3.32e-07!15;UBERON:0000179!3.32e-07!15;UBERON:0000463!3.32e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.67e-07;15!UBERON:0000179;2.67e-07;15!UBERON:0000463;2.67e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.78e-25,98;UBERON:0003061,4.78e-25,98;UBERON:0002193,2.38e-24,108;UBERON:0002405,1.58e-18,93;UBERON:0002371,1.75e-18,76;UBERON:0001474,4.22e-17,82;UBERON:0004765,8.94e-15,90;UBERON:0001434,2.99e-13,100;UBERON:0007023,1.47e-07,114;UBERON:0000178,3.30e-07,15;UBERON:0000179,3.30e-07,15;UBERON:0000463,3.30e-07,15 | |||
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| ||
|short_description=p1@HIVEP1 | |||
}} | }} |
Latest revision as of 03:30, 20 September 2015
Short description: | p1@HIVEP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HIVEP1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000487103_5end |
EntrezGene: | HIVEP1 |
HGNC: | 4920 |
UniProt: | C9J2N3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.05e-28 | 136 |
classical monocyte | 4.37e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.37e-26 | 42 |
myeloid leukocyte | 1.31e-24 | 72 |
defensive cell | 1.49e-24 | 48 |
phagocyte | 1.49e-24 | 48 |
granulocyte monocyte progenitor cell | 2.18e-21 | 67 |
hematopoietic lineage restricted progenitor cell | 9.21e-20 | 120 |
nongranular leukocyte | 2.12e-19 | 115 |
macrophage dendritic cell progenitor | 2.35e-19 | 61 |
myeloid lineage restricted progenitor cell | 3.62e-19 | 66 |
monopoietic cell | 3.08e-18 | 59 |
monocyte | 3.08e-18 | 59 |
monoblast | 3.08e-18 | 59 |
promonocyte | 3.08e-18 | 59 |
hematopoietic stem cell | 3.51e-17 | 168 |
hematopoietic cell | 2.18e-15 | 177 |
hematopoietic oligopotent progenitor cell | 3.63e-15 | 161 |
hematopoietic multipotent progenitor cell | 3.63e-15 | 161 |
myeloid cell | 8.89e-13 | 108 |
common myeloid progenitor | 8.89e-13 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.78e-25 | 98 |
blood island | 4.78e-25 | 98 |
hemolymphoid system | 2.38e-24 | 108 |
immune system | 1.58e-18 | 93 |
bone marrow | 1.75e-18 | 76 |
bone element | 4.22e-17 | 82 |
skeletal element | 8.94e-15 | 90 |
skeletal system | 2.99e-13 | 100 |
adult organism | 1.47e-07 | 114 |
blood | 3.30e-07 | 15 |
haemolymphatic fluid | 3.30e-07 | 15 |
organism substance | 3.30e-07 | 15 |