FFCP PHASE1:Hg19::chr6:12296687..12296706,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:12296687..12296706,+ to FFCP PHASE1:Hg19::chr6:12296687..12296706,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:12296687..12296706,+ | |||
|coexpression_cluster_id=C4552 | |||
|description=CAGE_peak_at_chr6:12296687..12296706,+ | |||
|id=chr6:12296687..12296706,+ | |||
|ontology_enrichment_celltype=CL:0002139!3.54e-12!24;CL:0000066!6.39e-11!254;CL:0000115!1.00e-09!35;CL:0000213!1.47e-09!57;CL:0000215!1.47e-09!57;CL:0005020!1.08e-07!6;CL:0002138!1.08e-07!6;CL:0005022!1.08e-07!6;CL:0000071!5.45e-07!18;CL:0002546!5.45e-07!18;CL:0002078!6.39e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.60e-24;24!CL:0000115;1.90e-22;36!CL:0002138;4.46e-19;6!CL:1000306;6.57e-17;4!CL:0002547;6.57e-17;4!CL:0002078;9.57e-15;45!CL:0000071;3.10e-11;18!CL:0000213;2.16e-09;58!CL:0000215;2.16e-09;58!CL:0002188;7.38e-09;5!CL:1000413;4.72e-08;9!CL:0002144;3.51e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.90e-25,36;CL:0002139,8.25e-25,24;CL:0002078,2.60e-19,45;CL:0005020,4.10e-19,6;CL:0002138,4.10e-19,6;CL:0005022,4.10e-19,6;CL:1000306,3.50e-17,4;CL:0002547,3.50e-17,4;CL:0000213,3.56e-16,58;CL:0000215,3.56e-16,58;CL:0000071,1.95e-11,18;CL:0002546,1.95e-11,18;CL:0000222,6.49e-10,121;CL:0002188,7.60e-09,5;CL:1000413,3.65e-08,9;CL:0002144,3.22e-07,3 | |||
|ontology_enrichment_development_v019=CL:0005022;4.46e-19;6!CL:0002546;3.10e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.48e-12!79;UBERON:0007798!4.48e-12!79;UBERON:0004872!1.60e-11!84;UBERON:0000055!2.27e-11!69;UBERON:0004535!5.07e-11!110;UBERON:0001009!2.67e-10!113;UBERON:0000477!2.16e-09!286;UBERON:0003914!3.51e-09!118;UBERON:0001637!1.12e-08!42;UBERON:0003509!1.12e-08!42;UBERON:0004572!1.12e-08!42;UBERON:0001981!1.26e-08!60;UBERON:0007500!1.26e-08!60;UBERON:0004537!1.26e-08!60;UBERON:0006965!1.26e-08!60;UBERON:0004111!2.47e-08!241;UBERON:0000467!4.20e-08!625;UBERON:0000480!5.20e-08!626;UBERON:0000025!2.14e-07!194;UBERON:0000468!2.23e-07!659;UBERON:0001986!5.45e-07!18;UBERON:0004638!5.45e-07!18;UBERON:0004852!5.45e-07!18;UBERON:0000483!8.87e-07!309;UBERON:0000119!9.33e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;6.57e-17;4!UBERON:0000415;6.57e-17;4!UBERON:0007240;6.57e-17;4!UBERON:0005742;6.57e-17;4!UBERON:0005734;6.57e-17;4!UBERON:0004664;6.57e-17;4!UBERON:0004663;6.57e-17;4!UBERON:0001473;3.10e-14;8!UBERON:0004536;3.10e-14;8!UBERON:0006558;3.10e-14;8!UBERON:0000055;5.76e-12;65!UBERON:0002465;2.53e-11;10!UBERON:0004638;3.10e-11;18!UBERON:0001986;3.10e-11;18!UBERON:0004852;3.10e-11;18!UBERON:0001637;3.78e-11;42!UBERON:0003509;3.78e-11;42!UBERON:0004572;3.78e-11;42!UBERON:0007500;2.16e-09;56!UBERON:0001981;2.16e-09;56!UBERON:0004537;2.16e-09;56!UBERON:0000947;4.60e-09;21!UBERON:0010191;4.60e-09;21!UBERON:0000487;5.18e-09;22!UBERON:0000490;7.22e-09;33!UBERON:0002049;3.17e-08;75!UBERON:0007798;3.17e-08;75!UBERON:0004573;4.12e-08;33!UBERON:0004571;4.12e-08;33!UBERON:0003915;4.72e-08;9!UBERON:0004700;4.72e-08;9!UBERON:0001917;4.72e-08;9!UBERON:0006914;8.21e-08;25!UBERON:0010523;3.51e-07;3!UBERON:0001915;3.51e-07;3!UBERON:0001982;3.51e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,4.78e-21,68;UBERON:0002049,9.86e-18,78;UBERON:0007798,9.86e-18,78;UBERON:0000415,3.50e-17,4;UBERON:0007240,3.50e-17,4;UBERON:0005742,3.50e-17,4;UBERON:0005734,3.50e-17,4;UBERON:0004664,3.50e-17,4;UBERON:0004663,3.50e-17,4;UBERON:0001473,2.92e-14,8;UBERON:0004536,2.92e-14,8;UBERON:0006558,2.92e-14,8;UBERON:0004535,3.62e-14,109;UBERON:0001009,1.19e-13,112;UBERON:0007500,4.19e-13,59;UBERON:0001981,4.19e-13,59;UBERON:0004537,4.19e-13,59;UBERON:0006965,4.19e-13,59;UBERON:0003914,1.27e-12,117;UBERON:0004872,1.27e-12,83;UBERON:0001637,3.78e-12,42;UBERON:0003509,3.78e-12,42;UBERON:0004572,3.78e-12,42;UBERON:0004638,1.95e-11,18;UBERON:0001986,1.95e-11,18;UBERON:0004852,1.95e-11,18;UBERON:0002465,2.41e-11,10;UBERON:0004111,3.24e-10,240;UBERON:0004797,7.16e-10,7;UBERON:0000487,3.58e-09,22;UBERON:0003081,3.69e-09,203;UBERON:0000947,3.76e-09,21;UBERON:0010191,3.76e-09,21;UBERON:0004573,5.85e-09,33;UBERON:0004571,5.85e-09,33;UBERON:0003915,3.65e-08,9;UBERON:0004700,3.65e-08,9;UBERON:0001917,3.65e-08,9;UBERON:0000025,4.37e-08,192;UBERON:0006914,5.97e-08,25;UBERON:0010523,3.22e-07,3;UBERON:0001915,3.22e-07,3;UBERON:0001982,3.22e-07,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0,1.34465029290355,0.602694528023977,0,0.487932798790507,0,0,0,0.286235987131057,0,0.251085279189606,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0.47296445977717,1.37898272294647,0,1.35426486594342,0.376484679085209,0,0,2.14258724659632,0.641858054152187,0.639337125799041,0,0,0,0.290209238628584,0,1.24564449799115,0.251248665256743,0,0.65156653411535,0,0.736555271975129,0.632924774881769,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.383587685530591,0,0,0,0,0,0.283604451492204,0.221729397462564,0.87834785693126,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0.79504962946682,0,2.42998351125316,0,2.93649605346934,1.6507082516404,0.835979866147242,1.55050055501597,0.71153252537342,3.01248551488203,3.62546385398232,0,5.6134273236079,0.735326160691737,3.24056779152704,1.96459402224975,0,0.563057402416611,0,0,0.366403487860815,0,0,0.436094052142534,0,1.39293562831038,1.19168262731897,1.72101972449288,1.77334191099179,0.560677600142307,2.1349799145941,0.49333509683432,0.311211035399766,0.67355336034844,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13432183160021,0.538168907066586,0,0.211931901159562,0,0,0,0,0.675105328965065,0.0974370051611986,0.252433774244115,0,0,0.710019185033229,0,0,0,0.818238361772504,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0.674338760312407,0.723033089650446,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0.857839051492628,0.439001141634502,0,0.402115889646523,0,0,0,1.44331342025273,0.115930404975077,0.587043471179108,4.47535988059329,7.87075371380238,10.2737242206683,0,0,0,0,0,0.93733833986777,0.671928512795438,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479249710983165,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0.106727557803444,0,1.66435439510497,0.30239029332968,0,0.460385919864187,0,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0,0.241718899183244,0.802025881213139,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,2.27466768141793,0.340187410553031,4.53423423814493,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,1.40373983744043,0.10115778085555,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,1.99031692572366,1.31535265576129,0,0,0.202910376962704,0.30982349809975,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62618933211459,0,1.53580351049616,0,0,0,0,2.74463030566391,0,0,0,0.409074730008619,0.123084805461069,1.55519793830904,0.359473404589307,0.179021174675609,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,3.05163472634166,0,0,0.219385397153973,0.21787692703798,0.557694977114413,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0.520679215005393,0,0.174118413160805,0.17472666824203,0.171986032471617,0,0.146178634172371,0,0.0969890164884194,0.353024506766001,0.225980740780532,0,0,0.0633107959558787,1.17330829640882,0.320635281006135,0,0.999048047910651,0,0.229073192331831,0.171594997861965,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.201550417460179,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,1.10043013569766,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0,0.886068179966986,1.22026264901963,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.796191777397232,0.800055529326307,0,0,0,0,0,0.260994291965212,1.13352962756136,0.231522474323834,0.734210113519403,0.358177682162975,0.308801447160972,0.438568099157414,0.176689145945881,0,0,0.256241518587947,0,0,0,0.194860308839388,0,0,0,0.983091635014877,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,1.41070377476274,2.1437183414724,0,0,0,0,0.504143392443436,0.0691572524642179,0.322951291263702,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,3.11166643269184,1.03499260351932,0,0.781078098613847,0,0.0634158101939068,0,0,0,0,3.19406069098988,0,0.336283722218824,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.111231401892069,0.078493092850514,0.157115589916002,0,0,0,0.9555033757741,0,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| ||
|short_description=p@chr6:12296687..12296706,+ | |||
}} | }} |
Latest revision as of 18:57, 30 July 2015
Short description: | p@chr6:12296687..12296706, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:12296687..12296706, + |
Coexpression cluster: | C4552_Lymphatic_Endothelial_Renal_pharyngeal_papillary_amniotic_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.90e-25 | 36 |
endothelial cell of vascular tree | 8.25e-25 | 24 |
meso-epithelial cell | 2.60e-19 | 45 |
lymphangioblast | 4.10e-19 | 6 |
endothelial cell of lymphatic vessel | 4.10e-19 | 6 |
vascular lymphangioblast | 4.10e-19 | 6 |
fibroblast of tunica adventitia of artery | 3.50e-17 | 4 |
fibroblast of the aortic adventitia | 3.50e-17 | 4 |
lining cell | 3.56e-16 | 58 |
barrier cell | 3.56e-16 | 58 |
blood vessel endothelial cell | 1.95e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.95e-11 | 18 |
mesodermal cell | 6.49e-10 | 121 |
glomerular endothelial cell | 7.60e-09 | 5 |
endothelial cell of artery | 3.65e-08 | 9 |
capillary endothelial cell | 3.22e-07 | 3 |