FFCP PHASE1:Hg19::chr6:12957533..12957555,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:12957533..12957555,+ to FFCP PHASE1:Hg19::chr6:12957533..12957555,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=221692 | |EntrezGene=221692 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20990 | |HGNC=20990 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-35bp_to_ENST00000482982_5end | |||
|cluster_id=chr6:12957533..12957555,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_7_at_PHACTR1_5end | |||
|id=chr6:12957533..12957555,+ | |||
|ontology_enrichment_celltype=CL:0000115!7.23e-08!35;CL:0002139!1.35e-07!24;CL:0000213!2.82e-07!57;CL:0000215!2.82e-07!57;CL:0002078!7.38e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.72e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.10e-07,24;CL:0000115,6.38e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.09e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.40e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003075!3.01e-25!86;UBERON:0007284!3.01e-25!86;UBERON:0001049!4.06e-24!57;UBERON:0005068!4.06e-24!57;UBERON:0006241!4.06e-24!57;UBERON:0007135!4.06e-24!57;UBERON:0002346!1.15e-23!90;UBERON:0007023!6.54e-23!115;UBERON:0003080!3.63e-22!42;UBERON:0003056!5.68e-22!61;UBERON:0002616!8.98e-22!59;UBERON:0002780!1.08e-21!41;UBERON:0001890!1.08e-21!41;UBERON:0006240!1.08e-21!41;UBERON:0005743!2.23e-21!86;UBERON:0002020!8.80e-21!34;UBERON:0003528!8.80e-21!34;UBERON:0001893!1.04e-20!34;UBERON:0002791!5.91e-20!33;UBERON:0001869!7.57e-20!32;UBERON:0000955!1.60e-19!69;UBERON:0006238!1.60e-19!69;UBERON:0001017!1.82e-19!82;UBERON:0000025!5.86e-19!194;UBERON:0000073!1.91e-18!94;UBERON:0001016!1.91e-18!94;UBERON:0004111!2.96e-18!241;UBERON:0000477!7.50e-18!286;UBERON:0000033!1.33e-17!123;UBERON:0000153!1.61e-17!129;UBERON:0007811!1.61e-17!129;UBERON:0000119!2.17e-16!312;UBERON:0000483!4.97e-16!309;UBERON:0000956!1.31e-15!25;UBERON:0000203!1.31e-15!25;UBERON:0002619!7.71e-15!22;UBERON:0004121!2.92e-14!169;UBERON:0000924!1.14e-13!173;UBERON:0006601!1.14e-13!173;UBERON:0001950!1.95e-13!20;UBERON:0000467!2.70e-09!625;UBERON:0000480!3.86e-09!626;UBERON:0000475!6.13e-09!365;UBERON:0000468!7.30e-09!659;UBERON:0002049!7.23e-08!79;UBERON:0007798!7.23e-08!79;UBERON:0000055!1.29e-07!69;UBERON:0000064!1.46e-07!219;UBERON:0000922!1.63e-07!612;UBERON:0000481!2.57e-07!347;UBERON:0002050!5.64e-07!605;UBERON:0005423!5.64e-07!605;UBERON:0000923!7.26e-07!604;UBERON:0005291!7.26e-07!604;UBERON:0006598!7.26e-07!604;UBERON:0002532!7.26e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.12e-26;34!UBERON:0001869;3.18e-26;32!UBERON:0002791;8.87e-26;32!UBERON:0003528;9.69e-26;34!UBERON:0002020;9.69e-26;34!UBERON:0002619;1.88e-24;22!UBERON:0000956;4.53e-23;25!UBERON:0000203;4.53e-23;25!UBERON:0001950;9.11e-22;20!UBERON:0002780;1.64e-21;41!UBERON:0001890;1.64e-21;41!UBERON:0000073;2.46e-17;53!UBERON:0002616;2.46e-17;53!UBERON:0001017;6.62e-13;75!UBERON:0000955;1.95e-11;68!UBERON:0000200;1.26e-10;6!UBERON:0001016;2.88e-10;83!UBERON:0000125;2.70e-09;9!UBERON:0002308;2.70e-09;9!UBERON:0001871;2.00e-07;6!UBERON:0002420;3.70e-07;9!UBERON:0007245;3.70e-07;9!UBERON:0010009;3.70e-07;9!UBERON:0010011;3.70e-07;9!UBERON:0000454;3.70e-07;9!UBERON:0009663;4.39e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.53e-33,56;UBERON:0005068,1.53e-33,56;UBERON:0006241,1.53e-33,56;UBERON:0007135,1.53e-33,56;UBERON:0003528,5.11e-31,34;UBERON:0002020,5.11e-31,34;UBERON:0001893,6.85e-31,34;UBERON:0000073,1.11e-30,53;UBERON:0002616,1.11e-30,53;UBERON:0002780,1.83e-29,41;UBERON:0001890,1.83e-29,41;UBERON:0003080,1.83e-29,41;UBERON:0006240,1.83e-29,41;UBERON:0001869,3.35e-29,32;UBERON:0002791,1.47e-28,32;UBERON:0003075,1.38e-27,82;UBERON:0007284,1.38e-27,82;UBERON:0002346,8.97e-27,86;UBERON:0001017,9.21e-27,81;UBERON:0000955,2.12e-25,68;UBERON:0006238,2.12e-25,68;UBERON:0001016,3.81e-25,89;UBERON:0002619,2.35e-24,22;UBERON:0010314,3.50e-23,132;UBERON:0000956,5.78e-23,25;UBERON:0000203,5.78e-23,25;UBERON:0003056,6.43e-23,61;UBERON:0001950,1.12e-21,20;UBERON:0010371,1.72e-21,104;UBERON:0000025,2.19e-21,192;UBERON:0007023,4.48e-20,114;UBERON:0004111,1.80e-19,240;UBERON:0004121,1.24e-15,171;UBERON:0000924,1.24e-15,171;UBERON:0006601,1.24e-15,171;UBERON:0000483,1.29e-11,306;UBERON:0000119,2.75e-11,309;UBERON:0000200,1.30e-10,6;UBERON:0000125,1.91e-09,9;UBERON:0002308,1.91e-09,9;UBERON:0011216,5.52e-08,223;UBERON:0000923,1.33e-07,560;UBERON:0010316,1.33e-07,560;UBERON:0005291,1.33e-07,560;UBERON:0006598,1.33e-07,560;UBERON:0010317,1.33e-07,560;UBERON:0002532,1.33e-07,560;UBERON:0001871,2.34e-07,6;UBERON:0002050,2.43e-07,564;UBERON:0002420,4.17e-07,9;UBERON:0007245,4.17e-07,9;UBERON:0010009,4.17e-07,9;UBERON:0010011,4.17e-07,9;UBERON:0000454,4.17e-07,9;UBERON:0005423,4.74e-07,581;UBERON:0009663,4.77e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0.123766352960047,0,0.672325146451775,1.80808358407193,2.92124036154949,1.95173119516203,0.123121058076788,0,0.313454721478088,2.28988789704845,0.684372125364421,0.502170558379211,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0.236482229888585,0,0,1.35426486594342,0,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0.56738522469114,0.622822248995575,0.251248665256743,0,0,0.605399502633369,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.144846518960824,1.5905718941022,0.973269740605272,0.378139268656271,0.443458794925128,0.790513071238134,1.57174890597255,0.364295288292542,0.370784442784429,0,0.174129737299267,0.531831842075461,0,0,0,1.78886166630035,0,1.73570250803797,1.13061588384802,1.67799774483962,0.825354125820202,1.46296476575767,2.32575083252396,1.42306505074684,1.00416183829401,0.805658634218294,0,1.22031028774085,1.47065232138347,2.43042584364528,1.16089646769304,0.673588117878509,1.80178368773316,0,1.89853131913626,0.732806975721629,0,0,0,0,0.759783069987479,0.132409180813219,0.573673241497627,0,0,2.1349799145941,0.74000264525148,0.933633106199299,1.0776853765575,0.653847612453835,0.302714855289863,0.576175924479999,0.937285727335186,1.24864030732128,1.1409436430889,0.448346041655403,0.704606991862589,0.323745888736263,0.140450806702248,0.61246251376468,0.122834317311768,2.16984140469107,2.37600571456411,1.48360157567134,0.910161361938026,0.718618141816238,0.336672227908132,0.375355559615893,1.38532057742091,0.438977620880838,0.30648779579902,0.751190294532984,0.226864366320042,0.179389635688862,0,0,0.300091096084402,0.309157587715317,1.03056216018252,0.18611685633159,0.168776332241266,0.0974370051611986,0.757301322732344,0.644349290496095,0,0,0,0.169560592310488,0.193260853163297,0.272746120590835,0,0.121973706129595,0.265059536642971,0.348581828608555,0.829288440122964,0,0,1.56449532329816,0.643240938192885,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,2.95262181849859,1.40241773803446,0.4115740113314,0,0,0,1.18157981336281,0,0,0.343135620597051,1.09750285408626,0,0.201057944823262,0.185176890317059,0.651616610620649,1.03993478527958,1.44331342025273,0.811512834825538,0.117408694235822,0.866198686566443,0.925971025153221,0.570762456703795,0,0,0.492434012174795,0.234004265139238,0.148631162288728,0.93733833986777,0,0,0,0,0,1.47798971368783,0,0,0.144119953416961,0,1.33345578013555,2.67391897890794,0,0,0.411309970813294,0.300343057843917,3.71574362419752,0.448524337381443,0.43596006883328,0.22001485746285,0.904902010304444,0,0.845302752556,0,0,0.514414748524284,0,0,0.142977993658148,0,0,0.65147236858747,0,0,3.61727252471503,0.871533458600294,3.69900067373611,0,0,0,0,0,0,0.289562613335158,0.61642896765115,0.537182889719687,0.224170287987055,0,0,0,1.52456774533478,0,0,0.670065061337395,0,0,0,0,0.36807447515742,0,0.542530047399471,0.207970861530807,0.356857977594324,0.315404830067869,0,0,0,0,0.664225598535437,0,1.56390506042549,0.391602314925481,0,0.206768026122887,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0.616838775210622,0.532685175939381,0.410635780069046,1.55776328755086,0.348631135379878,0,1.00253235151642,0.0920809889358963,0,0,0,0.902399225814824,0.15403067420883,0.784349769176855,0,0.527758144464379,0,0.680374821106063,1.29549549661284,3.08454505380579,0.270946437543853,0.501689773854853,1.01950509218015,0,0.223874754722178,0,0,2.3080511260475,1.31205858279882,5.53143270929315,0.618246069886334,0.27470839445503,0.082509499920588,0.574265537996172,0.650060246036521,0,0.193341436584244,0,0.15350367472613,0,0.644521469209642,0.290033387828457,0.255679882248303,0.178064071293475,1.15699440752685,0.960950336825531,3.31793052485919,0.2023155617111,0,0,0,0.924100740528266,1.06461206063404,0,1.11194531462352,0.286249773483982,0,0.316379424718726,0.38126038784765,0,0,0,0.78494864019923,0.359744915166629,0,0,1.81964233415984,0,0.842516912477962,0,0.487426979262569,2.11300293513511,0,0,0,0,0.66343897524122,0,0.578775534266688,0.655894752046633,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0.670302275535787,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,2.19537308576098,0.957526850661834,7.62024897805978,0.649243880549111,0.280797178113459,0.228234679033192,0,0,1.01575066680962,0.1605880751037,0,0,0.687010689511529,0,0,0.166849141711909,0,0,0,0.540911356951966,0.33307196799782,0,0,0.73254089635947,0,0,0,0,0,0,0.994147647766298,2.2507106625682,1.00177834520615,0.16480387422676,0,3.98495976502139,0.276283915531148,0,0.102268682502155,0,0.311039587661807,0,0,0,3.05794557474494,0,0,5.81599647657131,10.4827950922892,3.99227596002388,0,0,1.44999915086959,0,0,0,0,1.74962768029953,0,0.885741385813839,6.27101480852121,1.52581736317083,0.442317039724898,0,6.58156191461918,0,0,0.76950258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| ||
|short_description=p7@PHACTR1 | |||
}} | }} |
Latest revision as of 16:21, 24 September 2015
Short description: | p7@PHACTR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PHACTR1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -35bp_to_ENST00000482982_5end |
EntrezGene: | PHACTR1 |
HGNC: | 20990 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.10e-07 | 24 |
endothelial cell | 6.38e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.40e-07 | 14 |