FFCP PHASE1:Hg19::chr6:154831810..154831825,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:154831810..154831825,- to FFCP PHASE1:Hg19::chr6:154831810..154831825,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=154043 | |EntrezGene=154043 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23034 | |HGNC=23034 | ||
|TSSclassifier=strong | |||
|UniProt=Q6P9H4 | |UniProt=Q6P9H4 | ||
|association_with_transcript=-17bp_to_ENST00000367213_5end | |||
|cluster_id=chr6:154831810..154831825,- | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_3_at_CNKSR3_5end | |||
|id=chr6:154831810..154831825,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000507;3.98e-07;10!CL:1000494;3.98e-07;10!CL:1000497;7.85e-07;17!CL:0002518;7.85e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.04e-07,10;CL:1000494,4.04e-07,10;CL:1000497,8.59e-07,17;CL:0002518,8.59e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0003104;8.57e-11;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!3.01e-14!286;UBERON:0000481!5.63e-13!347;UBERON:0007023!1.71e-11!115;UBERON:0004111!4.90e-11!241;UBERON:0005172!8.00e-10!55;UBERON:0005173!8.00e-10!55;UBERON:0000475!1.03e-09!365;UBERON:0000489!3.48e-09!32;UBERON:0005743!2.09e-08!86;UBERON:0000468!2.48e-08!659;UBERON:0000062!3.23e-08!511;UBERON:0005177!7.10e-08!107;UBERON:0000119!7.40e-08!312;UBERON:0000153!7.74e-08!129;UBERON:0007811!7.74e-08!129;UBERON:0001017!7.78e-08!82;UBERON:0000033!8.79e-08!123;UBERON:0004121!8.81e-08!169;UBERON:0000025!9.31e-08!194;UBERON:0000064!1.19e-07!219;UBERON:0000073!1.25e-07!94;UBERON:0001016!1.25e-07!94;UBERON:0000483!1.61e-07!309;UBERON:0000924!1.76e-07!173;UBERON:0006601!1.76e-07!173;UBERON:0003103!1.83e-07!69;UBERON:0002113!2.32e-07!27;UBERON:0003918!2.32e-07!27;UBERON:0005095!2.32e-07!27;UBERON:0007687!2.32e-07!27;UBERON:0002417!4.20e-07!61;UBERON:0000916!4.20e-07!61;UBERON:0003075!9.75e-07!86;UBERON:0007284!9.75e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000489;2.31e-11;29!UBERON:0002113;7.57e-09;24!UBERON:0011143;7.57e-09;24!UBERON:0006554;9.89e-08;30!UBERON:0001008;9.89e-08;30!UBERON:0004211;3.98e-07;10!UBERON:0009773;3.98e-07;10!UBERON:0001231;3.98e-07;10!UBERON:0004810;3.98e-07;10!UBERON:0005172;7.64e-07;52!UBERON:0005173;7.64e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,8.41e-13,31;UBERON:0005172,8.51e-11,54;UBERON:0005173,8.51e-11,54;UBERON:0003103,3.39e-10,68;UBERON:0011216,3.99e-10,223;UBERON:0002113,4.91e-10,26;UBERON:0003918,4.91e-10,26;UBERON:0011143,4.91e-10,26;UBERON:0005095,4.91e-10,26;UBERON:0007687,4.91e-10,26;UBERON:0002417,1.12e-08,60;UBERON:0000916,1.12e-08,60;UBERON:0007023,1.13e-08,114;UBERON:0005177,3.58e-08,101;UBERON:0004810,4.04e-07,10;UBERON:0006554,4.77e-07,47;UBERON:0001008,9.57e-07,48 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,1.09220686065086,0.791300934685361,1.60896258848061,2.31978163009541,0.672325146451775,1.20538905604795,0,0,1.60057375499824,2.04000691244253,3.76145665773705,1.14494394852423,2.18999080116615,1.38096903554283,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.639312809217652,0.722878304769133,0.50133791063589,0.434539556882471,0,0.486634870302636,1.03988298880475,1.33037638477538,0.790513071238134,3.01251873644739,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.694281003215189,0,0.419499436209906,0.550236083880135,0.417989933073621,2.06733407335463,0.71153252537342,1.33888245105868,1.61131726843659,0.760272105718513,6.10155143870424,0.367663080345869,0.81014194788176,0.625098097988558,0.673588117878509,1.0135033243499,0,0,0.366403487860815,0,0,0,0.496971951695318,0.379891534993739,0.529636723252875,0.286836620748814,0.709336764396714,1.12135520028461,0,0.24666754841716,0.311211035399766,0.134710672069688,0.490385709340376,1.05950199351452,0.576175924479999,0.468642863667593,0,0.570471821544449,0.149448680551801,1.17434498643765,0.971237666208789,1.40450806702248,0.816616685019573,2.82518929817066,1.13658359293342,2.37600571456411,1.7308685049499,0,0.718618141816238,1.0100166837244,4.12891115577482,0,2.19488810440419,1.83892677479412,1.95309476578576,0.226864366320042,0.717558542755448,0.213557388818567,0,0,0.618315175430633,1.54584324027377,0.558350568994769,0.843881661206331,0.389748020644795,0.504867548488229,0.460249493211497,0.323292113637624,0.355009592516614,0.403008392910561,0.847802961552438,0,0,0,0.731842236777572,1.19276791489337,0.813357600086629,1.86589899027667,0.504641701751257,1.82488679537915,0,0,0,0.928735856063958,0,0.473227200159376,0,0.482022059766964,0.220587945464788,0.435758888184812,1.66089433377768,0.134831308160164,0.392442930250692,0.38474715694639,0.738155454624648,0,0.8231480226628,1.47008711385542,1.26755034821831,1.96565443335525,1.18157981336281,0,1.8448265781467,0.514703430895577,0,0,0.100528972411631,0.462942225792648,0.325808305310325,1.03993478527958,0,0.34779121492523,0.469634776943287,3.46479474626577,6.94478268864916,6.65889532821094,0,2.57545848628462,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0.25248486685276,0.698476837213859,0,0,0,0.308482478109971,1.20137223137567,0.857479297891735,1.00917975910825,0.87192013766656,0.8800594298514,0,3.57656445851882,0,0,2.08014873822732,1.54324424557285,0,1.5985330740966,0.428933980974443,0,0,0.65147236858747,0.710783897485092,0,0.301439377059586,0,0.099972991182057,0,0,0,0.479249710983165,3.44585807502342,0,0.723906533337896,0.61642896765115,0.179060963239896,0,0,0,0,2.7950408664471,1.30139853857622,0,1.00509759200609,0,0,0,0,3.0672872929785,3.00102312635806,2.17012018959788,0.831883446123229,1.24900292158013,1.73472656537328,2.6942525448324,0.902838299183157,0,1.03473071292505,0.664225598535437,0,0.60818530127658,1.37060810223918,0.686286847621712,0,0,0.106727557803444,1.21251028578504,0,4.5358543999452,0,0.306923946576125,0.561320188866147,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,1.69203229428271,0,0.0920809889358963,0.34444334449382,0.910455840033585,1.57349297951309,0.451199612907412,1.23224539367064,8.62784746094541,4.38417673959782,1.26661954671451,1.13733384070897,0.680374821106063,0.863663664408557,1.54227252690289,3.52230368807009,4.01351819083883,1.78413391131527,3.3243040357149,3.35812132083267,0,0,1.28225062558195,0.328014645699706,0.650756789328606,1.33953315142039,2.1060976908219,2.0627374980147,0.574265537996172,0,0,0.290012154876366,1.69453478826109,1.38153307253517,0.413509717453592,0.644521469209642,1.45016693914229,1.19317278382541,0.534192213880424,0,0.384380134730212,0,0.10115778085555,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0,2.60510858551767,0.316379424718726,0.38126038784765,0.255897791311334,0.42793898803392,0.318203247925937,0,0.359744915166629,0.823611089208164,0.942499218765491,0.202182481573316,0,0,0.48763373908959,0,0,0.545999645631943,0,0,0.551365343546124,0,0.438450885253763,0,3.27947376023316,0,0.30982349809975,0,0.573645408816206,0.392996164052485,0.35667105148125,0,0.633322905892992,0.329294892959902,0.75894634753143,2.0996083214699,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,2.88743956579008,0.245040215981032,0,0,0.213425530045242,0,0.399158742865633,0.957526850661834,1.2700414963433,0.649243880549111,0.842391534340376,0,0,0,0.846458889008016,0,0,0,0,0.307240764308458,0.223676107892416,0.333698283423817,0,4.17609260842864,11.0778659052941,1.35227839237992,0,0,1.12284324244932,1.46508179271894,0.485442086998054,0,0,0,1.18785872333055,0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| ||
|short_description=p3@CNKSR3 | |||
}} | }} |
Latest revision as of 08:33, 16 September 2015
Short description: | p3@CNKSR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CNKSR3_5end |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | -17bp_to_ENST00000367213_5end |
EntrezGene: | CNKSR3 |
HGNC: | 23034 |
UniProt: | Q6P9H4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.04e-07 | 10 |
nephron tubule epithelial cell | 4.04e-07 | 10 |
kidney cell | 8.59e-07 | 17 |
kidney epithelial cell | 8.59e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 8.41e-13 | 31 |
abdomen element | 8.51e-11 | 54 |
abdominal segment element | 8.51e-11 | 54 |
compound organ | 3.39e-10 | 68 |
organ system subdivision | 3.99e-10 | 223 |
kidney | 4.91e-10 | 26 |
kidney mesenchyme | 4.91e-10 | 26 |
upper urinary tract | 4.91e-10 | 26 |
kidney rudiment | 4.91e-10 | 26 |
kidney field | 4.91e-10 | 26 |
abdominal segment of trunk | 1.12e-08 | 60 |
abdomen | 1.12e-08 | 60 |
adult organism | 1.13e-08 | 114 |
trunk region element | 3.58e-08 | 101 |
nephron tubule epithelium | 4.04e-07 | 10 |
urinary system structure | 4.77e-07 | 47 |
renal system | 9.57e-07 | 48 |