FFCP PHASE1:Hg19::chr6:19838300..19838315,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3400 | |EntrezGene=3400 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=5363 | |HGNC=5363 | ||
|TSSclassifier=strong | |||
|UniProt=P47928 | |UniProt=P47928 | ||
|association_with_transcript=347bp_to_Y07958_5end | |||
|cluster_id=chr6:19838300..19838315,+ | |||
|coexpression_cluster_id=C96 | |||
|description=CAGE_peak_4_at_ID4_5end | |||
|id=chr6:19838300..19838315,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000817;9.98e-30;1!CL:0002535;2.05e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.78e-15,2;CL:0000817,7.42e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.81e-23;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;6.04e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,5.70e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.63e-18!115;UBERON:0001893!4.04e-15!34;UBERON:0001049!4.61e-15!57;UBERON:0005068!4.61e-15!57;UBERON:0006241!4.61e-15!57;UBERON:0007135!4.61e-15!57;UBERON:0002791!1.39e-14!33;UBERON:0001017!3.69e-14!82;UBERON:0002020!3.95e-14!34;UBERON:0003528!3.95e-14!34;UBERON:0005743!5.44e-14!86;UBERON:0002780!5.60e-14!41;UBERON:0001890!5.60e-14!41;UBERON:0006240!5.60e-14!41;UBERON:0003080!1.85e-13!42;UBERON:0001869!2.04e-13!32;UBERON:0000073!6.64e-13!94;UBERON:0001016!6.64e-13!94;UBERON:0002616!4.76e-12!59;UBERON:0002346!1.89e-11!90;UBERON:0002619!3.20e-11!22;UBERON:0000955!3.38e-11!69;UBERON:0006238!3.38e-11!69;UBERON:0001950!7.28e-11!20;UBERON:0003075!7.40e-11!86;UBERON:0007284!7.40e-11!86;UBERON:0000956!9.66e-11!25;UBERON:0000203!9.66e-11!25;UBERON:0000924!4.98e-08!173;UBERON:0006601!4.98e-08!173;UBERON:0003056!6.90e-08!61;UBERON:0004121!1.53e-07!169;UBERON:0001871!2.28e-07!7;UBERON:0002420!8.32e-07!9;UBERON:0007245!8.32e-07!9;UBERON:0010009!8.32e-07!9;UBERON:0010011!8.32e-07!9;UBERON:0000454!8.32e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.81e-23;5!UBERON:0006955;2.05e-15;2!UBERON:0004801;2.05e-15;2!UBERON:0002021;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,2.27e-23,5;UBERON:0004117,2.27e-23,5;UBERON:0007689,2.27e-23,5;UBERON:0007123,2.27e-23,5;UBERON:0003091,2.27e-23,5;UBERON:0006955,1.78e-15,2;UBERON:0004801,1.78e-15,2;UBERON:0009722,3.30e-11,11;UBERON:0007690,3.30e-11,11;UBERON:0008814,3.24e-07,18;UBERON:0002021,5.38e-07,5 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0.515281080091258,0.37223371266318,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0.239624855491583,1.14861935834114,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0.321707842287215,0,0,0,0.246381468041427,0,0.116210378459959,0,0,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0.183138929636687,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,2.45257662059956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0.994147647766298,0.422008249231538,0,0,0,0.398495976502139,0,1.25966373927138,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0.260427761085233,0,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0.723578631752448,0,0.221158519862449,0,0.438770794307945,0,0.278847488557207,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.31593289814244,0.300646838828985,0.103688191397247,0,0,0,0,0.569219092059585,0,0.173559738335131,0.293977192243133,0.783532859223623,0,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0.19871461170299,0.189932387867636,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0.942776138467182,0,0,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0,0,0.558564802544508,0,0,0.599037001496973,0,0,0,0,0,0.157566364614447,0.164831716762333,0.0674035438541849,0,0,0,0.681017030557878,0,0,0.415440338029185,0,0,0.182248669974074,0,0.157611414598396,0.209818352539992,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0.427149650270779,0.157204305099666,0,0,0,0,0,0.544017803369474,0.5013797880454,0,0,0,0,0.488105059607853,0.3755727921195,0,0.221858103073705,0.310482014706917,0,0,0,0,0,0.468334905806882,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0.181848659202559,0,0,0,0,0,0,0,0,0.643324774124777,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0.76872455576384,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0.169732529954025,0,0.371807292777007,0,0,6.38780134510152,0,0.705351887381368,0,0.192687675289379,1.41696576325585,0.159633859057151,0.205116364240755,0.252071696221718,0.138314504928436,0.484426936895553,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.266107110487916,0,0,0,0.131545547125698,0,0,0.313972371402056,0.628462359664008,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0.467878926924211,0,0.118920090777569,0.11294608203896,0.109940516745429,0.150962843566674,0.154348316215889,0,0,0,0,0.196308467114945,0,0.4226557275834,0.169927114687817,0.0939839179798536,0.128915775947154,0,0,0,0.0802413666891683,0,0,0.430018749454354,0.315543124386369,0.135982980381829,0,0,0,0,0,0.378499274505237,0,0,0.203977659483963,0,0,0.250707539292375,0.757786982182394,0.267964130156178,0.829169439458779,0,0,0.23806443146374,0.0645889098360061,0,0.224263725161227,1.01835453245064,1.21270313374932,0.217716747896961,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.244482888365733,0.406896178315738,0,0,0 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|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0.515281080091258,0.37223371266318,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0.239624855491583,1.14861935834114,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0.321707842287215,0,0,0,0.246381468041427,0,0.116210378459959,0,0,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0.183138929636687,0,0,0,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,2.45257662059956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0.307160702099232,0.994147647766298,0.422008249231538,0,0,0,0.398495976502139,0,1.25966373927138,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.278304294485554,0,0.260427761085233,0,0,0.1137934482855,0,0,0.344743373241465,0,0,0,0.723578631752448,0,0.221158519862449,0,0.438770794307945,0,0.278847488557207,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.31593289814244,0.300646838828985,0.103688191397247,0,0,0,0,0.569219092059585,0,0.173559738335131,0.293977192243133,0.783532859223623,0,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0.19871461170299,0.189932387867636,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0.942776138467182,0,0,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0,0,0.558564802544508,0,0,0.599037001496973,0,0,0,0,0,0.157566364614447,0.164831716762333,0.0674035438541849,0,0,0,0.681017030557878,0,0,0.415440338029185,0,0,0.182248669974074,0,0.157611414598396,0.209818352539992,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0.427149650270779,0.157204305099666,0,0,0,0,0,0.544017803369474,0.5013797880454,0,0,0,0,0.488105059607853,0.3755727921195,0,0.221858103073705,0.310482014706917,0,0,0,0,0,0.468334905806882,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0.181848659202559,0,0,0,0,0,0,0,0,0.643324774124777,0.260994291965212,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0.76872455576384,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0.169732529954025,0,0.371807292777007,0,0,6.38780134510152,0,0.705351887381368,0,0.192687675289379,1.41696576325585,0.159633859057151,0.205116364240755,0.252071696221718,0.138314504928436,0.484426936895553,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0.266107110487916,0,0,0,0.131545547125698,0,0,0.313972371402056,0.628462359664008,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0.118332000730565,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0.485710993059139,0.467878926924211,0,0.118920090777569,0.11294608203896,0.109940516745429,0.150962843566674,0.154348316215889,0,0,0,0,0.196308467114945,0,0.4226557275834,0.169927114687817,0.0939839179798536,0.128915775947154,0,0,0,0.0802413666891683,0,0,0.430018749454354,0.315543124386369,0.135982980381829,0,0,0,0,0,0.378499274505237,0,0,0.203977659483963,0,0,0.250707539292375,0.757786982182394,0.267964130156178,0.829169439458779,0,0,0.23806443146374,0.0645889098360061,0,0.224263725161227,1.01835453245064,1.21270313374932,0.217716747896961,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | ||
|short_description=p4@ID4 | |||
}} | }} |
Latest revision as of 02:45, 17 September 2015
Short description: | p4@ID4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ID4_5end |
Coexpression cluster: | C96_non_acute_tonsil_spleen_Burkitt_lymphoma_appendix |
Association with transcript: | 347bp_to_Y07958_5end |
EntrezGene: | ID4 |
HGNC: | 5363 |
UniProt: | P47928 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.78e-15 | 2 |
precursor B cell | 7.42e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 2.27e-23 | 5 |
pharyngeal pouch | 2.27e-23 | 5 |
thyroid diverticulum | 2.27e-23 | 5 |
pharyngeal pouch 2 | 2.27e-23 | 5 |
thyroid primordium | 2.27e-23 | 5 |
uterine epithelium | 1.78e-15 | 2 |
cervix epithelium | 1.78e-15 | 2 |
entire pharyngeal arch endoderm | 3.30e-11 | 11 |
early pharyngeal endoderm | 3.30e-11 | 11 |
pharyngeal arch system | 3.24e-07 | 18 |
occipital lobe | 5.38e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.70e-07 | 5 |