FFCP PHASE1:Hg19::chr6:40555056..40555135,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:40555056..40555135,- to FFCP PHASE1:Hg19::chr6:40555056..40555135,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57497 | |EntrezGene=57497 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21226 | |HGNC=21226 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULH4 | |UniProt=Q9ULH4 | ||
|association_with_transcript=0bp_to_NM_020737,uc003oph.1_5end | |||
|cluster_id=chr6:40555056..40555135,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_LRFN2_5end | |||
|id=chr6:40555056..40555135,- | |||
|ontology_enrichment_celltype=CL:0000625!9.95e-07!11 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.01e-14;82!UBERON:0006215;4.84e-09;3!UBERON:0003056;1.66e-08;3 | |||
|ontology_enrichment_disease=DOID:171!2.72e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;9.40e-07;10 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.54e-55!94;UBERON:0001016!4.54e-55!94;UBERON:0001017!1.36e-52!82;UBERON:0001049!3.33e-52!57;UBERON:0005068!3.33e-52!57;UBERON:0006241!3.33e-52!57;UBERON:0007135!3.33e-52!57;UBERON:0005743!3.10e-51!86;UBERON:0002616!4.19e-47!59;UBERON:0000955!1.11e-45!69;UBERON:0006238!1.11e-45!69;UBERON:0002780!7.10e-43!41;UBERON:0001890!7.10e-43!41;UBERON:0006240!7.10e-43!41;UBERON:0002346!1.08e-42!90;UBERON:0003080!1.49e-41!42;UBERON:0003075!7.59e-40!86;UBERON:0007284!7.59e-40!86;UBERON:0007023!3.86e-37!115;UBERON:0001893!4.78e-37!34;UBERON:0002020!4.84e-37!34;UBERON:0003528!4.84e-37!34;UBERON:0002791!1.18e-35!33;UBERON:0001869!4.23e-35!32;UBERON:0003056!9.82e-33!61;UBERON:0002619!1.23e-31!22;UBERON:0000924!4.87e-30!173;UBERON:0006601!4.87e-30!173;UBERON:0001950!7.40e-29!20;UBERON:0004121!9.77e-28!169;UBERON:0000153!1.76e-27!129;UBERON:0007811!1.76e-27!129;UBERON:0000956!5.15e-27!25;UBERON:0000203!5.15e-27!25;UBERON:0000033!1.97e-25!123;UBERON:0002420!8.36e-12!9;UBERON:0007245!8.36e-12!9;UBERON:0010009!8.36e-12!9;UBERON:0010011!8.36e-12!9;UBERON:0000454!8.36e-12!9;UBERON:0003076!1.42e-11!15;UBERON:0003057!1.42e-11!15;UBERON:0004732!1.95e-11!13;UBERON:0002308!2.23e-11!9;UBERON:0000125!2.23e-11!9;UBERON:0004733!2.55e-10!12;UBERON:0002028!2.55e-10!12;UBERON:0007277!2.55e-10!12;UBERON:0000200!3.98e-10!6;UBERON:0001871!4.52e-10!7;UBERON:0009663!5.12e-09!7;UBERON:0002021!6.05e-09!5;UBERON:0000025!6.93e-09!194;UBERON:0001872!7.87e-09!5;UBERON:0000349!1.36e-08!5;UBERON:0002298!7.15e-08!8;UBERON:0000064!1.28e-07!219;UBERON:0002680!2.97e-07!9;UBERON:0001895!2.97e-07!9;UBERON:0010092!2.97e-07!9;UBERON:0001894!3.44e-07!7;UBERON:0006222!3.44e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.28e-59;22!UBERON:0001950;4.63e-54;20!UBERON:0000956;9.33e-52;25!UBERON:0000203;9.33e-52;25!UBERON:0001869;1.38e-45;32!UBERON:0003528;3.28e-44;34!UBERON:0002020;3.28e-44;34!UBERON:0002791;1.95e-41;32!UBERON:0001893;1.27e-40;34!UBERON:0002780;1.86e-39;41!UBERON:0001890;1.86e-39;41!UBERON:0000073;1.41e-34;53!UBERON:0002616;1.41e-34;53!UBERON:0000955;1.24e-27;68!UBERON:0001016;1.39e-24;83!UBERON:0001017;1.55e-24;75!UBERON:0000200;7.66e-18;6!UBERON:0002021;1.45e-15;5!UBERON:0001871;1.84e-15;6!UBERON:0001872;2.43e-15;5!UBERON:0000349;6.98e-15;5!UBERON:0004732;8.77e-12;13!UBERON:0002784;2.36e-11;4!UBERON:0002680;3.46e-10;9!UBERON:0001895;3.46e-10;9!UBERON:0011216;4.23e-10;132!UBERON:0007023;4.62e-10;114!UBERON:0004733;5.77e-10;12!UBERON:0002028;5.77e-10;12!UBERON:0001870;7.00e-10;3!UBERON:0001894;1.40e-09;7!UBERON:0000988;2.88e-08;3!UBERON:0002771;4.54e-07;2!UBERON:0002702;4.61e-07;2!UBERON:0001876;4.68e-07;2!UBERON:0002298;5.29e-07;6!UBERON:0001954;7.25e-07;2!UBERON:0003022;7.25e-07;2!UBERON:0002421;7.25e-07;2!UBERON:0002600;7.25e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.61e-69,89;UBERON:0001017,1.40e-68,81;UBERON:0001049,1.16e-67,56;UBERON:0005068,1.16e-67,56;UBERON:0006241,1.16e-67,56;UBERON:0007135,1.16e-67,56;UBERON:0000073,1.43e-64,53;UBERON:0002616,1.43e-64,53;UBERON:0000955,5.95e-60,68;UBERON:0006238,5.95e-60,68;UBERON:0002619,2.62e-59,22;UBERON:0002780,4.00e-56,41;UBERON:0001890,4.00e-56,41;UBERON:0003080,4.00e-56,41;UBERON:0006240,4.00e-56,41;UBERON:0001950,5.37e-54,20;UBERON:0002346,2.45e-53,86;UBERON:0000956,1.05e-51,25;UBERON:0000203,1.05e-51,25;UBERON:0003528,1.86e-51,34;UBERON:0002020,1.86e-51,34;UBERON:0001869,3.03e-51,32;UBERON:0003075,1.21e-50,82;UBERON:0007284,1.21e-50,82;UBERON:0001893,6.86e-48,34;UBERON:0002791,5.09e-47,32;UBERON:0003056,4.28e-43,61;UBERON:0010371,9.86e-40,104;UBERON:0004121,8.87e-37,171;UBERON:0000924,8.87e-37,171;UBERON:0006601,8.87e-37,171;UBERON:0007023,7.69e-30,114;UBERON:0010314,5.32e-29,132;UBERON:0011216,5.83e-29,223;UBERON:0000200,8.50e-18,6;UBERON:0000025,1.42e-15,192;UBERON:0002021,1.48e-15,5;UBERON:0001871,1.93e-15,6;UBERON:0001872,2.43e-15,5;UBERON:0000349,6.89e-15,5;UBERON:0003076,8.84e-13,15;UBERON:0003057,8.84e-13,15;UBERON:0004732,8.18e-12,13;UBERON:0002784,2.83e-11,4;UBERON:0004111,2.14e-10,240;UBERON:0002680,2.84e-10,9;UBERON:0001895,2.84e-10,9;UBERON:0010092,2.84e-10,9;UBERON:0004733,5.45e-10,12;UBERON:0002028,5.45e-10,12;UBERON:0007277,5.45e-10,12;UBERON:0001870,7.54e-10,3;UBERON:0001894,1.86e-09,7;UBERON:0006222,1.86e-09,7;UBERON:0000988,2.18e-08,3;UBERON:0000483,2.63e-08,306;UBERON:0000119,4.01e-08,309;UBERON:0002771,4.75e-07,2;UBERON:0001876,4.75e-07,2;UBERON:0002702,4.89e-07,2;UBERON:0002298,5.03e-07,6;UBERON:0001954,7.15e-07,2;UBERON:0003022,7.15e-07,2;UBERON:0002421,7.15e-07,2;UBERON:0002600,7.15e-07,2 | |||
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| ||
|short_description=p1@LRFN2 | |||
}} | }} |
Latest revision as of 17:41, 18 September 2015
Short description: | p1@LRFN2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRFN2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_NM_020737, uc003oph.1_5end |
EntrezGene: | LRFN2 |
HGNC: | 21226 |
UniProt: | Q9ULH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data