FFCP PHASE1:Hg19::chr6:41703296..41703367,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:41703296..41703367,- to FFCP PHASE1:Hg19::chr6:41703296..41703367,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7942 | |EntrezGene=7942 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11753 | |HGNC=11753 | ||
|TSSclassifier=strong | |||
|UniProt=P19484 | |UniProt=P19484 | ||
|association_with_transcript=0bp_to_ENST00000373033,uc003oqt.1_5end | |||
|cluster_id=chr6:41703296..41703367,- | |||
|description=CAGE_peak_1_at_TFEB_5end | |||
|id=chr6:41703296..41703367,- | |||
|ontology_enrichment_celltype=CL:0000738!1.15e-34!140;CL:0002087!2.06e-31!119;CL:0002031!2.54e-27!124;CL:0000766!1.77e-22!76;CL:0002009!5.53e-20!65;CL:0000988!1.39e-19!182;CL:0002194!1.83e-19!63;CL:0000576!1.83e-19!63;CL:0000040!1.83e-19!63;CL:0000559!1.83e-19!63;CL:0000037!2.75e-19!172;CL:0000566!2.75e-19!172;CL:0000557!3.79e-19!71;CL:0002032!1.20e-18!165;CL:0000837!1.20e-18!165;CL:0002057!4.06e-17!42;CL:0000839!2.83e-16!70;CL:0000860!3.38e-15!45;CL:0000542!8.00e-11!53;CL:0000051!8.00e-11!53;CL:0000838!1.44e-10!52;CL:0000945!8.23e-10!24;CL:0000826!8.23e-10!24;CL:0000763!6.95e-09!112;CL:0000049!6.95e-09!112;CL:0000236!1.48e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000576;8.49e-13;48!CL:0000473;2.97e-12;39!CL:0000234;2.97e-12;39!CL:0000860;1.85e-11;33!CL:0002057;1.85e-11;33!CL:0000766;6.80e-11;69!CL:0000945;8.18e-10;24!CL:0002087;8.91e-10;104!CL:0000738;1.09e-08;136!CL:0000236;1.66e-08;13!CL:0000542;4.56e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.21e-36,136;CL:0002087,2.09e-33,115;CL:0002031,2.67e-29,120;CL:0000766,9.34e-25,72;CL:0002009,3.07e-22,61;CL:0002194,9.95e-22,59;CL:0000576,9.95e-22,59;CL:0000040,9.95e-22,59;CL:0000559,9.95e-22,59;CL:0000988,1.69e-21,177;CL:0000557,2.89e-21,67;CL:0000037,9.03e-21,168;CL:0002032,3.90e-20,161;CL:0000837,3.90e-20,161;CL:0000473,6.08e-20,48;CL:0000234,6.08e-20,48;CL:0000839,2.55e-18,66;CL:0000860,3.79e-17,42;CL:0002057,3.79e-17,42;CL:0000542,7.69e-11,53;CL:0000051,7.69e-11,53;CL:0000838,1.39e-10,52;CL:0000763,5.06e-10,108;CL:0000049,5.06e-10,108;CL:0000945,7.94e-10,24;CL:0000826,7.94e-10,24;CL:0000236,1.43e-08,14 | |||
|ontology_enrichment_development_v019=CL:0002057;8.14e-13;42!CL:0000051;4.56e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.10e-31!115;UBERON:0002390!5.11e-24!102;UBERON:0003061!5.11e-24!102;UBERON:0002193!2.34e-21!112;UBERON:0002371!1.96e-16!80;UBERON:0001474!2.37e-15!86;UBERON:0002405!8.51e-13!115;UBERON:0004765!1.97e-10!101;UBERON:0001434!1.97e-10!101;UBERON:0000178!4.32e-08!15;UBERON:0000179!4.32e-08!15;UBERON:0000463!4.32e-08!15;UBERON:0001049!5.69e-07!57;UBERON:0005068!5.69e-07!57;UBERON:0006241!5.69e-07!57;UBERON:0007135!5.69e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.70e-08;15!UBERON:0000179;3.70e-08;15!UBERON:0000463;3.70e-08;15!UBERON:0007023;5.05e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.42e-31,114;UBERON:0002390,6.29e-26,98;UBERON:0003061,6.29e-26,98;UBERON:0002193,5.51e-23,108;UBERON:0002371,3.78e-18,76;UBERON:0001474,6.84e-17,82;UBERON:0002405,1.10e-16,93;UBERON:0004765,2.35e-14,90;UBERON:0001434,1.25e-11,100;UBERON:0003081,2.23e-08,203;UBERON:0000178,4.20e-08,15;UBERON:0000179,4.20e-08,15;UBERON:0000463,4.20e-08,15;UBERON:0001049,6.90e-07,56;UBERON:0005068,6.90e-07,56;UBERON:0006241,6.90e-07,56;UBERON:0007135,6.90e-07,56 | |||
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| ||
|short_description=p1@TFEB | |||
}} | }} |
Latest revision as of 18:57, 18 September 2015
Short description: | p1@TFEB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TFEB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000373033, uc003oqt.1_5end |
EntrezGene: | TFEB |
HGNC: | 11753 |
UniProt: | P19484 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.21e-36 | 136 |
nongranular leukocyte | 2.09e-33 | 115 |
hematopoietic lineage restricted progenitor cell | 2.67e-29 | 120 |
myeloid leukocyte | 9.34e-25 | 72 |
macrophage dendritic cell progenitor | 3.07e-22 | 61 |
monopoietic cell | 9.95e-22 | 59 |
monocyte | 9.95e-22 | 59 |
monoblast | 9.95e-22 | 59 |
promonocyte | 9.95e-22 | 59 |
hematopoietic cell | 1.69e-21 | 177 |
granulocyte monocyte progenitor cell | 2.89e-21 | 67 |
hematopoietic stem cell | 9.03e-21 | 168 |
hematopoietic oligopotent progenitor cell | 3.90e-20 | 161 |
hematopoietic multipotent progenitor cell | 3.90e-20 | 161 |
defensive cell | 6.08e-20 | 48 |
phagocyte | 6.08e-20 | 48 |
myeloid lineage restricted progenitor cell | 2.55e-18 | 66 |
classical monocyte | 3.79e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.79e-17 | 42 |
lymphocyte | 7.69e-11 | 53 |
common lymphoid progenitor | 7.69e-11 | 53 |
lymphoid lineage restricted progenitor cell | 1.39e-10 | 52 |
myeloid cell | 5.06e-10 | 108 |
common myeloid progenitor | 5.06e-10 | 108 |
lymphocyte of B lineage | 7.94e-10 | 24 |
pro-B cell | 7.94e-10 | 24 |
B cell | 1.43e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.42e-31 | 114 |
hematopoietic system | 6.29e-26 | 98 |
blood island | 6.29e-26 | 98 |
hemolymphoid system | 5.51e-23 | 108 |
bone marrow | 3.78e-18 | 76 |
bone element | 6.84e-17 | 82 |
immune system | 1.10e-16 | 93 |
skeletal element | 2.35e-14 | 90 |
skeletal system | 1.25e-11 | 100 |
lateral plate mesoderm | 2.23e-08 | 203 |
blood | 4.20e-08 | 15 |
haemolymphatic fluid | 4.20e-08 | 15 |
organism substance | 4.20e-08 | 15 |
neural tube | 6.90e-07 | 56 |
neural rod | 6.90e-07 | 56 |
future spinal cord | 6.90e-07 | 56 |
neural keel | 6.90e-07 | 56 |