FFCP PHASE1:Hg19::chr6:57037089..57037146,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:57037089..57037146,+ to FFCP PHASE1:Hg19::chr6:57037089..57037146,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9532 | |EntrezGene=9532 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=938 | |HGNC=938 | ||
|TSSclassifier=strong | |||
|UniProt=O95816 | |UniProt=O95816 | ||
|association_with_transcript=0bp_to_ENST00000370693,NM_004282,uc003pdr.2_5end | |||
|cluster_id=chr6:57037089..57037146,+ | |||
|description=CAGE_peak_1_at_BAG2_5end | |||
|id=chr6:57037089..57037146,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.97e-31!180;CL:0000057!5.77e-20!75;CL:0000048!3.99e-12!430;CL:0000680!1.01e-11!57;CL:0000056!1.01e-11!57;CL:0000355!1.01e-11!57;CL:0000187!1.00e-10!54;CL:0000723!1.40e-10!436;CL:0000034!2.63e-10!444;CL:0000548!6.24e-10!679;CL:0000004!6.24e-10!679;CL:0000255!6.24e-10!679;CL:0002620!7.30e-10!23;CL:0000012!1.04e-09!682;CL:0000393!1.08e-09!60;CL:0000211!1.08e-09!60;CL:0000183!1.60e-09!59;CL:0000192!2.68e-08!42;CL:0000514!2.68e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0002620;6.86e-10;23!CL:0000057;2.40e-08;73!CL:0000187;6.95e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.24e-20,76;CL:0000680,3.83e-12,58;CL:0000056,3.83e-12,58;CL:0000355,3.83e-12,58;CL:0000048,6.83e-12,427;CL:0000187,3.88e-11,55;CL:0000723,2.52e-10,433;CL:0000393,4.71e-10,61;CL:0000211,4.71e-10,61;CL:0000034,4.72e-10,441;CL:0002620,7.10e-10,23;CL:0000192,1.07e-08,43;CL:0000514,1.07e-08,43 | |||
|ontology_enrichment_development_v019=CL:0000355;6.02e-07;58 | |||
|ontology_enrichment_disease=DOID:14566!9.04e-10!239;DOID:162!6.28e-09!235;DOID:2531!9.03e-07!51;DOID:0060083!9.03e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,7.19e-10,239;DOID:162,5.05e-09,235;DOID:2531,8.87e-07,51;DOID:0060083,8.87e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.18e-14!83;UBERON:0002329!1.18e-14!83;UBERON:0003077!1.18e-14!83;UBERON:0003059!1.18e-14!83;UBERON:0007282!1.18e-14!83;UBERON:0009618!1.18e-14!83;UBERON:0007285!1.18e-14!83;UBERON:0004290!1.29e-12!70;UBERON:0005256!3.93e-12!143;UBERON:0002385!8.83e-11!63;UBERON:0001015!8.83e-11!63;UBERON:0000383!8.83e-11!63;UBERON:0001134!1.72e-10!61;UBERON:0002036!1.72e-10!61;UBERON:0003082!1.72e-10!61;UBERON:0000486!5.81e-10!82;UBERON:0003104!1.36e-09!238;UBERON:0009142!1.36e-09!238;UBERON:0002100!3.31e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,3.04e-13,160;UBERON:0009142,3.04e-13,160;UBERON:0002329,5.36e-13,71;UBERON:0003059,5.36e-13,71;UBERON:0007282,5.36e-13,71;UBERON:0004290,5.36e-13,71;UBERON:0009618,5.36e-13,71;UBERON:0007524,6.18e-13,73;UBERON:0003077,1.46e-12,72;UBERON:0007285,1.46e-12,72;UBERON:0007503,2.41e-11,78;UBERON:0002385,3.79e-11,64;UBERON:0001015,3.79e-11,64;UBERON:0000383,3.79e-11,64;UBERON:0001134,7.41e-11,62;UBERON:0002036,7.41e-11,62;UBERON:0003082,7.41e-11,62;UBERON:0005256,1.11e-10,122;UBERON:0000486,2.42e-10,83 | |||
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| ||
|short_description=p1@BAG2 | |||
}} | }} |
Latest revision as of 10:36, 19 September 2015
Short description: | p1@BAG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BAG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000370693, NM_004282, uc003pdr.2_5end |
EntrezGene: | BAG2 |
HGNC: | 938 |
UniProt: | O95816 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.24e-20 | 76 |
muscle precursor cell | 3.83e-12 | 58 |
myoblast | 3.83e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.83e-12 | 58 |
multi fate stem cell | 6.83e-12 | 427 |
muscle cell | 3.88e-11 | 55 |
somatic stem cell | 2.52e-10 | 433 |
electrically responsive cell | 4.71e-10 | 61 |
electrically active cell | 4.71e-10 | 61 |
stem cell | 4.72e-10 | 441 |
skin fibroblast | 7.10e-10 | 23 |
smooth muscle cell | 1.07e-08 | 43 |
smooth muscle myoblast | 1.07e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 3.04e-13 | 160 |
entire embryonic mesenchyme | 3.04e-13 | 160 |
somite | 5.36e-13 | 71 |
presomitic mesoderm | 5.36e-13 | 71 |
presumptive segmental plate | 5.36e-13 | 71 |
dermomyotome | 5.36e-13 | 71 |
trunk paraxial mesoderm | 5.36e-13 | 71 |
dense mesenchyme tissue | 6.18e-13 | 73 |
paraxial mesoderm | 1.46e-12 | 72 |
presumptive paraxial mesoderm | 1.46e-12 | 72 |
epithelial vesicle | 2.41e-11 | 78 |
muscle tissue | 3.79e-11 | 64 |
musculature | 3.79e-11 | 64 |
musculature of body | 3.79e-11 | 64 |
skeletal muscle tissue | 7.41e-11 | 62 |
striated muscle tissue | 7.41e-11 | 62 |
myotome | 7.41e-11 | 62 |
trunk mesenchyme | 1.11e-10 | 122 |
multilaminar epithelium | 2.42e-10 | 83 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 7.19e-10 | 239 |
cancer | 5.05e-09 | 235 |
hematologic cancer | 8.87e-07 | 51 |
immune system cancer | 8.87e-07 | 51 |