FFCP PHASE1:Hg19::chr6:78171746..78171769,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:78171746..78171769,+ to FFCP PHASE1:Hg19::chr6:78171746..78171769,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:78171746..78171769,+ | |||
|description=CAGE_peak_at_chr6:78171746..78171769,+ | |||
|id=chr6:78171746..78171769,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.05e-45!24;CL:0000071!1.82e-35!18;CL:0002546!1.82e-35!18;CL:0000115!2.60e-34!35;CL:0002078!1.76e-25!44;CL:0000213!2.44e-19!57;CL:0000215!2.44e-19!57;CL:1000413!8.59e-19!9;CL:0000222!9.53e-14!119;CL:0002544!5.20e-13!6;CL:0002543!5.62e-13!6;CL:0005020!1.87e-11!6;CL:0002138!1.87e-11!6;CL:0005022!1.87e-11!6;CL:0002594!2.92e-08!4;CL:0002551!1.35e-07!6;CL:0000076!2.58e-07!62;CL:0002618!3.23e-07!3;CL:0002144!5.96e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.88e-103;24!CL:0000071;4.55e-102;18!CL:0000115;5.62e-66;36!CL:1000413;2.06e-52;9!CL:0002078;2.54e-42;45!CL:0002544;3.14e-35;6!CL:0002543;3.64e-35;6!CL:0000213;1.50e-29;58!CL:0000215;1.50e-29;58!CL:0002618;3.35e-18;3!CL:0002144;2.25e-17;3!CL:0000076;2.79e-16;63!CL:0002367;4.56e-13;2!CL:0002545;4.84e-13;2!CL:0002363;6.40e-12;2!CL:0002138;5.19e-09;6!CL:0002550;2.75e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.27e-103,24;CL:0000071,4.84e-102,18;CL:0002546,4.84e-102,18;CL:0000115,2.87e-81,36;CL:0002078,4.64e-64,45;CL:1000413,2.19e-52,9;CL:0000213,1.27e-48,58;CL:0000215,1.27e-48,58;CL:0002544,3.05e-35,6;CL:0002543,3.86e-35,6;CL:0000222,1.41e-29,121;CL:0000076,2.17e-26,63;CL:0002618,3.55e-18,3;CL:0002144,2.12e-17,3;CL:0002321,1.27e-13,250;CL:0002367,4.17e-13,2;CL:0002545,5.29e-13,2;CL:0002363,6.40e-12,2;CL:0000008,6.40e-12,2;CL:0005020,5.19e-09,6;CL:0002138,5.19e-09,6;CL:0005022,5.19e-09,6;CL:0000066,2.07e-07,253;CL:0002550,2.67e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002546;4.55e-102;18!CL:0000008;6.40e-12;2!CL:0000222;2.41e-10;121!CL:0005022;5.19e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.82e-35!18;UBERON:0004638!1.82e-35!18;UBERON:0004852!1.82e-35!18;UBERON:0002049!1.34e-31!79;UBERON:0007798!1.34e-31!79;UBERON:0000487!6.69e-28!22;UBERON:0006914!7.90e-24!25;UBERON:0000055!5.82e-23!69;UBERON:0004535!1.61e-22!110;UBERON:0001009!1.45e-21!113;UBERON:0003915!8.59e-19!9;UBERON:0004700!8.59e-19!9;UBERON:0001917!8.59e-19!9;UBERON:0001981!1.54e-17!60;UBERON:0007500!1.54e-17!60;UBERON:0004537!1.54e-17!60;UBERON:0006965!1.54e-17!60;UBERON:0000477!1.06e-16!286;UBERON:0001638!3.35e-14!9;UBERON:0003920!3.35e-14!9;UBERON:0004582!3.35e-14!9;UBERON:0004872!4.31e-13!84;UBERON:0000033!7.97e-13!123;UBERON:0004111!1.39e-12!241;UBERON:0000153!1.46e-12!129;UBERON:0007811!1.46e-12!129;UBERON:0000025!2.10e-11!194;UBERON:0002616!8.00e-11!59;UBERON:0002066!1.77e-10!5;UBERON:0000955!4.42e-10!69;UBERON:0006238!4.42e-10!69;UBERON:0002200!4.58e-10!11;UBERON:0006876!4.58e-10!11;UBERON:0000483!8.51e-10!309;UBERON:0003056!1.07e-09!61;UBERON:0001893!1.21e-09!34;UBERON:0000119!1.52e-09!312;UBERON:0001869!3.08e-09!32;UBERON:0002791!7.51e-09!33;UBERON:0002020!1.52e-08!34;UBERON:0003528!1.52e-08!34;UBERON:0001637!2.08e-08!42;UBERON:0003509!2.08e-08!42;UBERON:0004572!2.08e-08!42;UBERON:0002780!2.29e-08!41;UBERON:0001890!2.29e-08!41;UBERON:0006240!2.29e-08!41;UBERON:0001473!2.36e-08!8;UBERON:0004536!2.36e-08!8;UBERON:0006558!2.36e-08!8;UBERON:0001310!2.92e-08!4;UBERON:0003080!4.48e-08!42;UBERON:0000369!5.20e-08!4;UBERON:0002435!5.20e-08!4;UBERON:0000204!5.20e-08!4;UBERON:0010082!5.20e-08!4;UBERON:0003075!6.30e-08!86;UBERON:0007284!6.30e-08!86;UBERON:0003914!1.22e-07!118;UBERON:0001017!1.63e-07!82;UBERON:0002346!2.72e-07!90;UBERON:0001049!3.67e-07!57;UBERON:0005068!3.67e-07!57;UBERON:0006241!3.67e-07!57;UBERON:0007135!3.67e-07!57;UBERON:0004121!3.78e-07!169;UBERON:0001915!5.96e-07!3;UBERON:0001982!5.96e-07!3;UBERON:0005743!6.82e-07!86;UBERON:0000924!9.03e-07!173;UBERON:0006601!9.03e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.55e-102;18!UBERON:0001986;4.55e-102;18!UBERON:0004852;4.55e-102;18!UBERON:0000487;8.04e-83;22!UBERON:0006914;2.01e-72;25!UBERON:0003915;2.06e-52;9!UBERON:0004700;2.06e-52;9!UBERON:0001917;2.06e-52;9!UBERON:0000490;1.86e-49;33!UBERON:0001638;4.04e-31;9!UBERON:0003920;4.04e-31;9!UBERON:0004582;4.04e-31;9!UBERON:0000055;2.13e-25;65!UBERON:0007500;8.00e-25;56!UBERON:0001981;8.00e-25;56!UBERON:0004537;8.00e-25;56!UBERON:0010260;3.01e-22;9!UBERON:0002049;1.10e-21;75!UBERON:0007798;1.10e-21;75!UBERON:0002066;1.17e-18;5!UBERON:0003914;7.21e-18;74!UBERON:0010523;2.25e-17;3!UBERON:0001915;2.25e-17;3!UBERON:0001982;2.25e-17;3!UBERON:0001637;9.34e-14;42!UBERON:0003509;9.34e-14;42!UBERON:0004572;9.34e-14;42!UBERON:0005969;4.56e-13;2!UBERON:0003956;4.56e-13;2!UBERON:0005800;4.84e-13;2!UBERON:0001515;4.84e-13;2!UBERON:0001009;4.02e-12;112!UBERON:0003566;6.40e-12;2!UBERON:0001777;6.40e-12;2!UBERON:0004535;5.49e-11;109!UBERON:0000025;1.02e-10;93!UBERON:0000947;1.14e-09;21!UBERON:0010191;1.14e-09;21!UBERON:0004111;1.25e-07;130!UBERON:0001473;7.20e-07;8!UBERON:0004536;7.20e-07;8!UBERON:0006558;7.20e-07;8!UBERON:0001874;8.67e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,4.84e-102,18;UBERON:0001986,4.84e-102,18;UBERON:0004852,4.84e-102,18;UBERON:0000487,8.46e-83,22;UBERON:0006914,2.10e-72,25;UBERON:0003915,2.19e-52,9;UBERON:0004700,2.19e-52,9;UBERON:0001917,2.19e-52,9;UBERON:0002049,7.23e-49,78;UBERON:0007798,7.23e-49,78;UBERON:0000055,3.99e-44,68;UBERON:0007500,4.59e-39,59;UBERON:0001981,4.59e-39,59;UBERON:0004537,4.59e-39,59;UBERON:0006965,4.59e-39,59;UBERON:0004535,1.97e-33,109;UBERON:0001009,2.17e-32,112;UBERON:0001638,4.23e-31,9;UBERON:0003920,4.23e-31,9;UBERON:0004582,4.23e-31,9;UBERON:0004872,1.81e-26,83;UBERON:0010260,3.57e-22,9;UBERON:0002066,1.22e-18,5;UBERON:0003914,1.81e-17,117;UBERON:0010523,2.12e-17,3;UBERON:0001915,2.12e-17,3;UBERON:0001982,2.12e-17,3;UBERON:0000490,6.62e-16,148;UBERON:0001637,7.11e-15,42;UBERON:0003509,7.11e-15,42;UBERON:0004572,7.11e-15,42;UBERON:0005969,4.17e-13,2;UBERON:0003956,4.17e-13,2;UBERON:0005800,5.29e-13,2;UBERON:0001515,5.29e-13,2;UBERON:0003566,6.40e-12,2;UBERON:0001777,6.40e-12,2;UBERON:0003081,3.03e-10,203;UBERON:0000025,6.79e-10,192;UBERON:0004111,7.98e-10,240;UBERON:0000947,1.13e-09,21;UBERON:0010191,1.13e-09,21;UBERON:0000483,3.56e-09,306;UBERON:0000119,4.96e-09,309;UBERON:0001473,7.20e-07,8;UBERON:0004536,7.20e-07,8;UBERON:0006558,7.20e-07,8;UBERON:0001801,9.86e-07,14 | |||
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| ||
|short_description=p@chr6:78171746..78171769,+ | |||
}} | }} |
Latest revision as of 03:19, 31 July 2015
Short description: | p@chr6:78171746..78171769, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:78171746..78171769, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.27e-103 | 24 |
blood vessel endothelial cell | 4.84e-102 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.84e-102 | 18 |
endothelial cell | 2.87e-81 | 36 |
meso-epithelial cell | 4.64e-64 | 45 |
endothelial cell of artery | 2.19e-52 | 9 |
lining cell | 1.27e-48 | 58 |
barrier cell | 1.27e-48 | 58 |
aortic endothelial cell | 3.05e-35 | 6 |
vein endothelial cell | 3.86e-35 | 6 |
mesodermal cell | 1.41e-29 | 121 |
squamous epithelial cell | 2.17e-26 | 63 |
endothelial cell of umbilical vein | 3.55e-18 | 3 |
capillary endothelial cell | 2.12e-17 | 3 |
embryonic cell | 1.27e-13 | 250 |
trabecular meshwork cell | 4.17e-13 | 2 |
thoracic aorta endothelial cell | 5.29e-13 | 2 |
keratocyte | 6.40e-12 | 2 |
migratory cranial neural crest cell | 6.40e-12 | 2 |
lymphangioblast | 5.19e-09 | 6 |
endothelial cell of lymphatic vessel | 5.19e-09 | 6 |
vascular lymphangioblast | 5.19e-09 | 6 |
epithelial cell | 2.07e-07 | 253 |
fibroblast of the conjuctiva | 2.67e-07 | 1 |