FFCP PHASE1:Hg19::chr7:100271452..100271499,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:100271452..100271499,+ to FFCP PHASE1:Hg19::chr7:100271452..100271499,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2783 | |EntrezGene=2783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4398 | |HGNC=4398 | ||
|TSSclassifier=strong | |||
|UniProt=B3KPU1 | |UniProt=B3KPU1 | ||
|association_with_transcript=-1bp_to_ENST00000427895_5end | |||
|cluster_id=chr7:100271452..100271499,+ | |||
|description=CAGE_peak_3_at_GNB2_5end | |||
|id=chr7:100271452..100271499,+ | |||
|ontology_enrichment_celltype=CL:0000220!5.88e-16!246;CL:0002321!1.03e-15!248;CL:0002371!6.42e-14!591;CL:0000222!1.15e-12!119;CL:0000183!2.97e-12!59;CL:0000144!8.22e-12!625;CL:0000187!1.69e-10!54;CL:0000192!2.92e-10!42;CL:0000514!2.92e-10!42;CL:0000680!2.94e-09!57;CL:0000056!2.94e-09!57;CL:0000355!2.94e-09!57;CL:0000359!5.24e-09!32;CL:0000393!6.76e-09!60;CL:0000211!6.76e-09!60;CL:0000548!2.88e-08!679;CL:0000004!2.88e-08!679;CL:0000255!2.88e-08!679;CL:1000449!5.40e-08!16;CL:0000115!7.13e-08!35;CL:0000012!1.25e-07!682;CL:0002078!1.33e-07!44;CL:1000497!6.04e-07!18;CL:0002518!6.04e-07!18;CL:0000055!8.86e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.88e-08;32!CL:1000449;2.41e-08;15!CL:1000497;3.63e-07;17!CL:0002518;3.63e-07;17!CL:0000192;3.77e-07;43!CL:1000507;5.45e-07;10!CL:1000494;5.45e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.00e-15,250;CL:0000222,1.31e-12,121;CL:0000187,2.00e-10,55;CL:0000192,3.72e-10,43;CL:0000514,3.72e-10,43;CL:0000680,3.32e-09,58;CL:0000056,3.32e-09,58;CL:0000355,3.32e-09,58;CL:0000359,5.24e-09,32;CL:0000393,7.48e-09,61;CL:0000211,7.48e-09,61;CL:1000449,2.77e-08,15;CL:0000115,9.41e-08,36;CL:0002078,1.62e-07,45;CL:1000497,3.82e-07,17;CL:0002518,3.82e-07,17;CL:1000507,5.53e-07,10;CL:1000494,5.53e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;3.77e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.18e-13!216;UBERON:0002049!2.49e-12!79;UBERON:0007798!2.49e-12!79;UBERON:0003914!6.00e-12!118;UBERON:0001981!6.86e-12!60;UBERON:0007500!6.86e-12!60;UBERON:0004537!6.86e-12!60;UBERON:0006965!6.86e-12!60;UBERON:0004872!8.28e-12!84;UBERON:0000055!1.71e-11!69;UBERON:0001009!2.99e-11!113;UBERON:0004535!1.16e-10!110;UBERON:0005256!6.90e-10!143;UBERON:0001637!8.99e-10!42;UBERON:0003509!8.99e-10!42;UBERON:0004572!8.99e-10!42;UBERON:0000486!3.52e-09!82;UBERON:0000914!3.53e-09!83;UBERON:0002329!3.53e-09!83;UBERON:0003077!3.53e-09!83;UBERON:0003059!3.53e-09!83;UBERON:0007282!3.53e-09!83;UBERON:0009618!3.53e-09!83;UBERON:0007285!3.53e-09!83;UBERON:0004290!4.99e-09!70;UBERON:0000926!1.76e-08!448;UBERON:0004120!1.76e-08!448;UBERON:0006603!1.76e-08!448;UBERON:0001134!1.99e-08!61;UBERON:0002036!1.99e-08!61;UBERON:0003082!1.99e-08!61;UBERON:0002385!3.47e-08!63;UBERON:0001015!3.47e-08!63;UBERON:0000383!3.47e-08!63;UBERON:0004211!5.40e-08!16;UBERON:0001285!5.40e-08!16;UBERON:0007684!5.40e-08!16;UBERON:0003220!5.40e-08!16;UBERON:0004208!5.40e-08!16;UBERON:0000490!5.89e-08!138;UBERON:0006555!9.46e-08!17;UBERON:0005103!9.46e-08!17;UBERON:0000083!9.46e-08!17;UBERON:0009201!9.46e-08!17;UBERON:0004819!9.46e-08!17;UBERON:0006553!9.46e-08!17;UBERON:0003074!9.46e-08!17;UBERON:0003060!9.46e-08!17;UBERON:0000080!1.45e-07!18;UBERON:0002120!1.45e-07!18;UBERON:0004875!1.45e-07!18;UBERON:0005721!1.45e-07!18;UBERON:0005754!1.45e-07!18;UBERON:0007297!1.45e-07!18;UBERON:0002100!2.02e-07!216;UBERON:0004876!3.13e-07!20;UBERON:0003103!5.69e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;4.37e-09;74!UBERON:0006555;2.41e-08;15!UBERON:0004819;2.41e-08;15!UBERON:0001285;2.41e-08;15!UBERON:0007684;2.41e-08;15!UBERON:0007500;2.29e-07;56!UBERON:0001981;2.29e-07;56!UBERON:0004537;2.29e-07;56!UBERON:0004211;5.45e-07;10!UBERON:0009773;5.45e-07;10!UBERON:0001231;5.45e-07;10!UBERON:0004810;5.45e-07;10!UBERON:0001637;5.98e-07;42!UBERON:0003509;5.98e-07;42!UBERON:0004572;5.98e-07;42 | |||
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| ||
|short_description=p3@GNB2 | |||
}} | }} |
Latest revision as of 08:33, 20 September 2015
Short description: | p3@GNB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GNB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENST00000427895_5end |
EntrezGene: | GNB2 |
HGNC: | 4398 |
UniProt: | B3KPU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.00e-15 | 250 |
mesodermal cell | 1.31e-12 | 121 |
muscle cell | 2.00e-10 | 55 |
smooth muscle cell | 3.72e-10 | 43 |
smooth muscle myoblast | 3.72e-10 | 43 |
muscle precursor cell | 3.32e-09 | 58 |
myoblast | 3.32e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.32e-09 | 58 |
vascular associated smooth muscle cell | 5.24e-09 | 32 |
electrically responsive cell | 7.48e-09 | 61 |
electrically active cell | 7.48e-09 | 61 |
epithelial cell of nephron | 2.77e-08 | 15 |
endothelial cell | 9.41e-08 | 36 |
meso-epithelial cell | 1.62e-07 | 45 |
kidney cell | 3.82e-07 | 17 |
kidney epithelial cell | 3.82e-07 | 17 |
kidney tubule cell | 5.53e-07 | 10 |
nephron tubule epithelial cell | 5.53e-07 | 10 |