FFCP PHASE1:Hg19::chr8:41508327..41508355,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=157848 | |EntrezGene=157848 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26328 | |HGNC=26328 | ||
|TSSclassifier=strong | |||
|UniProt=A6NJ46 | |UniProt=A6NJ46 | ||
|association_with_transcript=-316bp_to_ENST00000425142_5end | |||
|cluster_id=chr8:41508327..41508355,- | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_1_at_NKX6-3_5end | |||
|id=chr8:41508327..41508355,- | |||
|ontology_enrichment_celltype=CL:0002178!6.58e-13!3 | |||
|ontology_enrichment_celltype_v019=CL:0002178;2.91e-27;3!CL:0002535;1.82e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.72e-27,3;CL:0002535,1.82e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!7.68e-19!2;DOID:1799!3.40e-10!1;DOID:10165!3.40e-10!1;DOID:1798!3.40e-10!1;DOID:0050687!8.14e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3493;2.72e-40;2!DOID:1799;8.53e-21;1!DOID:10165;8.53e-21;1!DOID:1798;8.53e-21;1!DOID:299;4.28e-13;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.01e-40,2;DOID:1799,7.72e-21,1;DOID:10165,7.72e-21,1;DOID:1798,7.72e-21,1;DOID:299,4.29e-13,25 | |||
|ontology_enrichment_uberon=UBERON:0000945!1.29e-10!8;UBERON:0010039!1.29e-10!8;UBERON:0005409!2.15e-08!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;5.57e-36;5!UBERON:0010039;5.57e-36;5!UBERON:0005409;3.81e-14;22!UBERON:0001041;2.40e-13;14!UBERON:0006955;1.82e-11;2!UBERON:0004801;1.82e-11;2!UBERON:0004921;1.94e-08;33!UBERON:0002114;5.54e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,8.05e-23,8;UBERON:0010039,8.05e-23,8;UBERON:0005409,1.45e-12,25;UBERON:0006955,1.82e-11,2;UBERON:0004801,1.82e-11,2;UBERON:0002114,5.54e-08,2 | |||
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|short_description=p1@NKX6-3 | |||
}} | }} |
Latest revision as of 06:37, 18 September 2015
Short description: | p1@NKX6-3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NKX6-3_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | -316bp_to_ENST00000425142_5end |
EntrezGene: | NKX6-3 |
HGNC: | 26328 |
UniProt: | A6NJ46 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.72e-27 | 3 |
epithelial cell of cervix | 1.82e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
stomach | 8.05e-23 | 8 |
food storage organ | 8.05e-23 | 8 |
gastrointestinal system | 1.45e-12 | 25 |
uterine epithelium | 1.82e-11 | 2 |
cervix epithelium | 1.82e-11 | 2 |
duodenum | 5.54e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.01e-40 | 2 |
islet cell tumor | 7.72e-21 | 1 |
endocrine pancreas cancer | 7.72e-21 | 1 |
pancreatic endocrine carcinoma | 7.72e-21 | 1 |
adenocarcinoma | 4.29e-13 | 25 |