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FFCP PHASE1:Hg19::chr8:55370693..55370704,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr8:55370693..55370704,+
|DHSsupport=supported 
|short_description=p4@SOX17
|DPIdataset=robust
|description=CAGE_peak_4_at_SOX17_5end
|association_with_transcript=198bp_to_ENST00000297316,NM_022454,uc003xsb.3_5end
|EntrezGene=64321
|EntrezGene=64321
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=18122
|HGNC=18122
|TSSclassifier=strong
|UniProt=Q9H6I2
|UniProt=Q9H6I2
|association_with_transcript=198bp_to_ENST00000297316,NM_022454,uc003xsb.3_5end
|cluster_id=chr8:55370693..55370704,+
|coexpression_cluster_id=C4762
|description=CAGE_peak_4_at_SOX17_5end
|id=chr8:55370693..55370704,+
|ontology_enrichment_celltype=CL:0002139!2.40e-28!24;CL:0000359!1.05e-27!32;CL:0000222!3.87e-25!119;CL:0000115!5.11e-24!35;CL:0000192!2.44e-19!42;CL:0000514!2.44e-19!42;CL:0000071!2.67e-19!18;CL:0002546!2.67e-19!18;CL:0002078!1.26e-17!44;CL:0000183!1.77e-15!59;CL:0000187!1.03e-14!54;CL:0000393!1.08e-13!60;CL:0000211!1.08e-13!60;CL:0000680!1.45e-13!57;CL:0000056!1.45e-13!57;CL:0000355!1.45e-13!57;CL:0000213!1.82e-13!57;CL:0000215!1.82e-13!57;CL:0002539!3.21e-12!10;CL:0005020!7.09e-11!6;CL:0002138!7.09e-11!6;CL:0005022!7.09e-11!6;CL:1000413!1.37e-10!9;CL:0000220!6.11e-09!246;CL:0002321!9.26e-09!248;CL:0002543!4.79e-08!6;CL:0002494!6.39e-08!16;CL:1000306!1.16e-07!4;CL:0002547!1.16e-07!4;CL:0002592!4.36e-07!3;CL:0002595!7.32e-07!5
|ontology_enrichment_celltype_v019=CL:0000359;3.16e-23;32!CL:0000071;4.78e-22;18!CL:0002139;2.33e-16;24!CL:1000413;4.94e-15;9!CL:0000115;6.73e-15;36!CL:0000192;7.16e-13;43!CL:0002144;2.20e-12;3!CL:0002592;4.44e-12;3!CL:0000187;1.06e-09;55!CL:0000511;1.10e-09;1!CL:0002625;1.10e-09;1!CL:0000216;1.10e-09;1!CL:0002078;1.48e-09;45!CL:0002539;3.54e-08;10!CL:0000213;9.06e-08;58!CL:0000215;9.06e-08;58!CL:0002595;1.36e-07;5
|ontology_enrichment_celltype_v019_2=CL:0000359,1.06e-24,32;CL:0000222,2.15e-24,121;CL:0000071,8.03e-22,18;CL:0002546,8.03e-22,18;CL:0000192,5.44e-18,43;CL:0000514,5.44e-18,43;CL:0000115,2.00e-17,36;CL:0002139,3.42e-16,24;CL:1000413,9.90e-15,9;CL:0000187,1.00e-13,55;CL:0002078,1.10e-13,45;CL:0000680,6.18e-13,58;CL:0000056,6.18e-13,58;CL:0000355,6.18e-13,58;CL:0000213,7.79e-13,58;CL:0000215,7.79e-13,58;CL:0002144,1.29e-12,3;CL:0002321,1.32e-12,250;CL:0002592,3.01e-12,3;CL:0000393,3.19e-12,61;CL:0000211,3.19e-12,61;CL:0000511,5.31e-10,1;CL:0002625,5.31e-10,1;CL:0000216,5.31e-10,1;CL:0002539,2.58e-08,10;CL:0002595,1.72e-07,5;CL:0000076,1.99e-07,63
|ontology_enrichment_development_v019=CL:0002546;4.78e-22;18!CL:0000514;7.16e-13;43!CL:0000355;4.58e-08;58
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000055!2.61e-54!69;UBERON:0004872!4.64e-54!84;UBERON:0001981!2.39e-48!60;UBERON:0007500!2.39e-48!60;UBERON:0004537!2.39e-48!60;UBERON:0006965!2.39e-48!60;UBERON:0002049!1.12e-47!79;UBERON:0007798!1.12e-47!79;UBERON:0001637!8.88e-47!42;UBERON:0003509!8.88e-47!42;UBERON:0004572!8.88e-47!42;UBERON:0004535!1.20e-42!110;UBERON:0001009!4.82e-41!113;UBERON:0003914!6.23e-40!118;UBERON:0004573!1.32e-37!33;UBERON:0004571!1.32e-37!33;UBERON:0000025!1.14e-21!194;UBERON:0000477!2.98e-21!286;UBERON:0004111!9.04e-21!241;UBERON:0000947!1.21e-20!21;UBERON:0010191!1.21e-20!21;UBERON:0001986!2.67e-19!18;UBERON:0004638!2.67e-19!18;UBERON:0004852!2.67e-19!18;UBERON:0000490!3.30e-19!138;UBERON:0000487!1.35e-17!22;UBERON:0003081!4.90e-17!216;UBERON:0006914!6.03e-15!25;UBERON:0004237!3.21e-12!10;UBERON:0004695!3.21e-12!10;UBERON:0002111!3.21e-12!10;UBERON:0004178!3.21e-12!10;UBERON:0001134!3.24e-12!61;UBERON:0002036!3.24e-12!61;UBERON:0003082!3.24e-12!61;UBERON:0000926!6.77e-12!448;UBERON:0004120!6.77e-12!448;UBERON:0006603!6.77e-12!448;UBERON:0000483!7.77e-12!309;UBERON:0002385!1.31e-11!63;UBERON:0001015!1.31e-11!63;UBERON:0000383!1.31e-11!63;UBERON:0000119!1.50e-11!312;UBERON:0003915!1.37e-10!9;UBERON:0004700!1.37e-10!9;UBERON:0001917!1.37e-10!9;UBERON:0004290!8.91e-10!70;UBERON:0000948!1.80e-08!24;UBERON:0005498!1.80e-08!24;UBERON:0004140!1.80e-08!24;UBERON:0009881!1.80e-08!24;UBERON:0004141!1.80e-08!24;UBERON:0003084!1.80e-08!24;UBERON:0007005!1.80e-08!24;UBERON:0004139!1.80e-08!24;UBERON:0004291!1.80e-08!24;UBERON:0001473!6.18e-08!8;UBERON:0004536!6.18e-08!8;UBERON:0006558!6.18e-08!8;UBERON:0000467!8.24e-08!625;UBERON:0000480!9.30e-08!626;UBERON:0000415!1.16e-07!4;UBERON:0007240!1.16e-07!4;UBERON:0005742!1.16e-07!4;UBERON:0005734!1.16e-07!4;UBERON:0004664!1.16e-07!4;UBERON:0004663!1.16e-07!4;UBERON:0001135!1.49e-07!15;UBERON:0000486!2.03e-07!82;UBERON:0000914!2.95e-07!83;UBERON:0002329!2.95e-07!83;UBERON:0003077!2.95e-07!83;UBERON:0003059!2.95e-07!83;UBERON:0007282!2.95e-07!83;UBERON:0009618!2.95e-07!83;UBERON:0007285!2.95e-07!83;UBERON:0007100!3.21e-07!27;UBERON:0001621!4.36e-07!3;UBERON:0000468!4.68e-07!659;UBERON:0005256!6.30e-07!143;UBERON:0003498!6.58e-07!5;UBERON:0005985!6.58e-07!5;UBERON:0003834!7.32e-07!5;UBERON:0001533!7.32e-07!5
|ontology_enrichment_uberon_v019=UBERON:0001637;3.76e-32;42!UBERON:0003509;3.76e-32;42!UBERON:0004572;3.76e-32;42!UBERON:0007500;1.83e-30;56!UBERON:0001981;1.83e-30;56!UBERON:0004537;1.83e-30;56!UBERON:0004573;1.92e-27;33!UBERON:0004571;1.92e-27;33!UBERON:0000487;2.77e-23;22!UBERON:0004638;4.78e-22;18!UBERON:0001986;4.78e-22;18!UBERON:0004852;4.78e-22;18!UBERON:0006914;2.26e-20;25!UBERON:0003914;4.66e-18;74!UBERON:0000055;4.22e-16;65!UBERON:0003915;4.94e-15;9!UBERON:0004700;4.94e-15;9!UBERON:0001917;4.94e-15;9!UBERON:0000490;1.56e-14;33!UBERON:0002049;4.78e-13;75!UBERON:0007798;4.78e-13;75!UBERON:0010523;2.20e-12;3!UBERON:0001915;2.20e-12;3!UBERON:0001982;2.20e-12;3!UBERON:0003498;4.44e-12;3!UBERON:0005985;4.44e-12;3!UBERON:0001621;4.44e-12;3!UBERON:0003513;2.71e-11;7!UBERON:0000947;7.01e-10;21!UBERON:0010191;7.01e-10;21!UBERON:0001136;1.10e-09;1!UBERON:0001343;1.10e-09;1!UBERON:0004910;1.10e-09;1!UBERON:0004813;1.10e-09;1!UBERON:0000025;1.99e-08;93!UBERON:0004237;3.54e-08;10!UBERON:0004695;3.54e-08;10!UBERON:0002111;3.54e-08;10!UBERON:0004178;3.54e-08;10!UBERON:0001009;1.07e-07;112!UBERON:0003834;1.36e-07;5!UBERON:0001533;1.36e-07;5!UBERON:0004535;1.48e-07;109!UBERON:0000119;6.93e-07;139
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|short_description=p4@SOX17
}}
}}

Latest revision as of 12:39, 18 September 2015

Short description:p4@SOX17
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_4_at_SOX17_5end
Coexpression cluster:C4762_Endothelial_Wilms_mature_Renal_endometrioid_Smooth_Lymphatic
Association with transcript: 198bp_to_ENST00000297316, NM_022454, uc003xsb.3_5end
EntrezGene:SOX17
HGNC: 18122
UniProt: Q9H6I2
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data