FFCP PHASE1:Hg19::chr8:94870010..94870025,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:94870010..94870025,+ to FFCP PHASE1:Hg19::chr8:94870010..94870025,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54704 | |EntrezGene=54704 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9279 | |HGNC=9279 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000523021_5end | |||
|cluster_id=chr8:94870010..94870025,+ | |||
|description=CAGE_peak_13_at_PDP1_5end | |||
|id=chr8:94870010..94870025,+ | |||
|ontology_enrichment_celltype=CL:0000243!7.71e-12!15;CL:0000125!7.71e-12!15;CL:0000030!7.71e-12!15;CL:0000339!7.71e-12!15;CL:0000095!2.63e-10!17;CL:0000123!2.63e-10!17;CL:0000128!1.53e-09!7;CL:0000126!1.53e-09!7;CL:0000127!1.53e-09!7;CL:0002453!1.53e-09!7;CL:0000306!8.09e-09!4;CL:0002222!8.09e-09!4;CL:0002224!8.09e-09!4;CL:0000077!8.47e-09!19 | |||
|ontology_enrichment_celltype_v019=CL:0000306;2.03e-16;4!CL:0002222;2.03e-16;4!CL:0002224;2.03e-16;4!CL:0002573;1.28e-10;2!CL:0000077;3.39e-09;19!CL:0000243;8.23e-07;15!CL:0000125;8.23e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,1.65e-16,4;CL:0002222,1.65e-16,4;CL:0002224,1.65e-16,4;CL:0002573,1.28e-10,2;CL:0000077,3.36e-09,19;CL:0000243,8.29e-07,15;CL:0000125,8.29e-07,15;CL:0000030,8.29e-07,15;CL:0000339,8.29e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000339;8.23e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;9.79e-09;1!DOID:3165;9.79e-09;1!DOID:0060121;9.79e-09;1!DOID:2438;9.79e-09;1!DOID:4418;9.79e-09;1!DOID:5662;1.88e-08;1!DOID:6193;4.89e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,9.79e-09,1;DOID:3165,9.79e-09,1;DOID:0060121,9.79e-09,1;DOID:2438,9.79e-09,1;DOID:4418,9.79e-09,1;DOID:5662,1.88e-08,1;DOID:6193,6.68e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003056!2.74e-28!61;UBERON:0001893!1.89e-27!34;UBERON:0001869!2.52e-27!32;UBERON:0002791!4.14e-26!33;UBERON:0002780!8.00e-26!41;UBERON:0001890!8.00e-26!41;UBERON:0006240!8.00e-26!41;UBERON:0003080!4.99e-25!42;UBERON:0003075!1.12e-23!86;UBERON:0007284!1.12e-23!86;UBERON:0002020!3.90e-23!34;UBERON:0003528!3.90e-23!34;UBERON:0002346!4.12e-22!90;UBERON:0000955!2.29e-21!69;UBERON:0006238!2.29e-21!69;UBERON:0001049!1.97e-19!57;UBERON:0005068!1.97e-19!57;UBERON:0006241!1.97e-19!57;UBERON:0007135!1.97e-19!57;UBERON:0000956!5.44e-19!25;UBERON:0000203!5.44e-19!25;UBERON:0001017!5.54e-19!82;UBERON:0005743!7.46e-19!86;UBERON:0000073!8.63e-19!94;UBERON:0001016!8.63e-19!94;UBERON:0002616!1.69e-18!59;UBERON:0000033!4.05e-18!123;UBERON:0000153!1.26e-17!129;UBERON:0007811!1.26e-17!129;UBERON:0002619!8.10e-15!22;UBERON:0001950!1.56e-14!20;UBERON:0004121!3.67e-12!169;UBERON:0000924!1.33e-11!173;UBERON:0006601!1.33e-11!173;UBERON:0000025!1.52e-09!194;UBERON:0000369!6.51e-09!4;UBERON:0002435!6.51e-09!4;UBERON:0000204!6.51e-09!4;UBERON:0010082!6.51e-09!4;UBERON:0010077!8.09e-09!4;UBERON:0005389!8.09e-09!4;UBERON:0000484!8.09e-09!4;UBERON:0002546!8.09e-09!4;UBERON:0000965!8.09e-09!4;UBERON:0001803!8.09e-09!4;UBERON:0003073!8.09e-09!4;UBERON:0005426!8.09e-09!4;UBERON:0007625!3.26e-08!11;UBERON:0000477!5.16e-08!286;UBERON:0004111!7.02e-08!241;UBERON:0000483!7.39e-08!309;UBERON:0002420!8.61e-08!9;UBERON:0007245!8.61e-08!9;UBERON:0010009!8.61e-08!9;UBERON:0010011!8.61e-08!9;UBERON:0000454!8.61e-08!9;UBERON:0000119!1.21e-07!312;UBERON:0000200!1.39e-07!6;UBERON:0009663!1.65e-07!7;UBERON:0005383!3.75e-07!3;UBERON:0005382!3.75e-07!3;UBERON:0007023!4.49e-07!115;UBERON:0002021!7.23e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;2.03e-16;4!UBERON:0005389;2.03e-16;4!UBERON:0000484;2.03e-16;4!UBERON:0000965;2.03e-16;4!UBERON:0001803;2.03e-16;4!UBERON:0002791;3.55e-11;32!UBERON:0001869;1.18e-10;32!UBERON:0003528;1.20e-10;34!UBERON:0002020;1.20e-10;34!UBERON:0007625;2.17e-10;11!UBERON:0001893;3.98e-10;34!UBERON:0005383;4.72e-10;3!UBERON:0005382;4.72e-10;3!UBERON:0009663;2.78e-09;7!UBERON:0001282;2.79e-08;1!UBERON:0009842;2.79e-08;1!UBERON:0003704;2.79e-08;1!UBERON:0001171;2.79e-08;1!UBERON:0001172;2.79e-08;1!UBERON:0001801;3.46e-08;14!UBERON:0001874;4.89e-08;1!UBERON:0000369;9.45e-08;4!UBERON:0002435;9.45e-08;4!UBERON:0000204;9.45e-08;4!UBERON:0002420;2.53e-07;9!UBERON:0000125;2.53e-07;9!UBERON:0007245;2.53e-07;9!UBERON:0002308;2.53e-07;9!UBERON:0010009;2.53e-07;9!UBERON:0010011;2.53e-07;9!UBERON:0000454;2.53e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.65e-16,4;UBERON:0005389,1.65e-16,4;UBERON:0000484,1.65e-16,4;UBERON:0002546,1.65e-16,4;UBERON:0000965,1.65e-16,4;UBERON:0001803,1.65e-16,4;UBERON:0003073,1.65e-16,4;UBERON:0005426,1.65e-16,4;UBERON:0003056,1.03e-13,61;UBERON:0002791,4.54e-12,32;UBERON:0001869,4.54e-12,32;UBERON:0003528,2.57e-11,34;UBERON:0002020,2.57e-11,34;UBERON:0001893,2.57e-11,34;UBERON:0007625,1.95e-10,11;UBERON:0005383,4.51e-10,3;UBERON:0005382,4.51e-10,3;UBERON:0003075,1.08e-09,82;UBERON:0007284,1.08e-09,82;UBERON:0009663,2.51e-09,7;UBERON:0002780,3.00e-09,41;UBERON:0001890,3.00e-09,41;UBERON:0003080,3.00e-09,41;UBERON:0006240,3.00e-09,41;UBERON:0002346,3.78e-09,86;UBERON:0000076,1.66e-08,8;UBERON:0001282,3.10e-08,1;UBERON:0009842,3.10e-08,1;UBERON:0003704,3.10e-08,1;UBERON:0001171,3.10e-08,1;UBERON:0001172,3.10e-08,1;UBERON:0001801,3.18e-08,14;UBERON:0001874,5.07e-08,1;UBERON:0000369,9.14e-08,4;UBERON:0002435,9.14e-08,4;UBERON:0000204,9.14e-08,4;UBERON:0010082,9.14e-08,4;UBERON:0010314,2.18e-07,132;UBERON:0002420,2.34e-07,9;UBERON:0000125,2.34e-07,9;UBERON:0007245,2.34e-07,9;UBERON:0002308,2.34e-07,9;UBERON:0010009,2.34e-07,9;UBERON:0010011,2.34e-07,9;UBERON:0000454,2.34e-07,9;UBERON:0010371,3.24e-07,104;UBERON:0001016,4.03e-07,89;UBERON:0000073,5.95e-07,53;UBERON:0002616,5.95e-07,53 | |||
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| ||
|short_description=p13@PDP1 | |||
}} | }} |
Latest revision as of 12:34, 19 September 2015
Short description: | p13@PDP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PDP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000523021_5end |
EntrezGene: | PDP1 |
HGNC: | 9279 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 1.65e-16 | 4 |
vertebrate lens cell | 1.65e-16 | 4 |
lens epithelial cell | 1.65e-16 | 4 |
Schwann cell | 1.28e-10 | 2 |
mesothelial cell | 3.36e-09 | 19 |
glial cell (sensu Vertebrata) | 8.29e-07 | 15 |
glial cell | 8.29e-07 | 15 |
glioblast | 8.29e-07 | 15 |
glioblast (sensu Vertebrata) | 8.29e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 9.79e-09 | 1 |
skin benign neoplasm | 9.79e-09 | 1 |
integumentary system benign neoplasm | 9.79e-09 | 1 |
dermis tumor | 9.79e-09 | 1 |
cutaneous fibrous histiocytoma | 9.79e-09 | 1 |
pleomorphic carcinoma | 1.88e-08 | 1 |
epithelioid sarcoma | 6.68e-08 | 1 |