FFCP PHASE1:Hg19::chr9:130639970..130639996,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:130639970..130639996,- to FFCP PHASE1:Hg19::chr9:130639970..130639996,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=203 | |EntrezGene=203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=361 | |HGNC=361 | ||
|TSSclassifier=strong | |||
|UniProt=F8VRY5 | |UniProt=F8VRY5 | ||
|association_with_transcript=-20bp_to_ENST00000550992_5end | |||
|cluster_id=chr9:130639970..130639996,- | |||
|description=CAGE_peak_2_at_AK1_5end | |||
|id=chr9:130639970..130639996,- | |||
|ontology_enrichment_celltype=CL:0000055!2.21e-24!180;CL:0000220!2.78e-17!246;CL:0000222!4.54e-17!119;CL:0002321!8.18e-17!248;CL:0000183!8.96e-15!59;CL:0000393!7.27e-13!60;CL:0000211!7.27e-13!60;CL:0000680!9.56e-13!57;CL:0000056!9.56e-13!57;CL:0000355!9.56e-13!57;CL:0000187!2.74e-12!54;CL:0000192!3.90e-11!42;CL:0000514!3.90e-11!42;CL:0000359!3.00e-08!32;CL:0000057!1.02e-07!75;CL:0002078!1.06e-07!44;CL:0000115!1.22e-07!35;CL:0000071!1.96e-07!18;CL:0002546!1.96e-07!18;CL:1000449!2.39e-07!16;CL:0002139!9.32e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000192;1.97e-08;43!CL:0000359;6.65e-08;32!CL:0000187;1.20e-07;55!CL:0000071;1.33e-07;18!CL:0000393;2.12e-07;61!CL:0000211;2.12e-07;61!CL:1000449;3.06e-07;15!CL:0002139;6.63e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.14e-17,121;CL:0002321,5.32e-17,250;CL:0000393,4.58e-13,61;CL:0000211,4.58e-13,61;CL:0000680,6.06e-13,58;CL:0000056,6.06e-13,58;CL:0000355,6.06e-13,58;CL:0000187,1.75e-12,55;CL:0000192,2.58e-11,43;CL:0000514,2.58e-11,43;CL:0000359,2.79e-08,32;CL:0002078,7.06e-08,45;CL:0000115,8.19e-08,36;CL:0000057,1.23e-07,76;CL:0000071,1.84e-07,18;CL:0002546,1.84e-07,18;CL:1000449,2.69e-07,15;CL:0002139,8.80e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000514;1.97e-08;43!CL:0000355;7.51e-08;58!CL:0002546;1.33e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.18e-28!312;UBERON:0000483!6.32e-28!309;UBERON:0000475!1.58e-23!365;UBERON:0000481!2.25e-23!347;UBERON:0000477!2.33e-23!286;UBERON:0000468!7.83e-21!659;UBERON:0000025!1.38e-20!194;UBERON:0004111!2.78e-19!241;UBERON:0000467!7.09e-19!625;UBERON:0000914!1.14e-18!83;UBERON:0002329!1.14e-18!83;UBERON:0003077!1.14e-18!83;UBERON:0003059!1.14e-18!83;UBERON:0007282!1.14e-18!83;UBERON:0009618!1.14e-18!83;UBERON:0007285!1.14e-18!83;UBERON:0000480!1.41e-18!626;UBERON:0000923!2.17e-16!604;UBERON:0005291!2.17e-16!604;UBERON:0006598!2.17e-16!604;UBERON:0002532!2.17e-16!604;UBERON:0002050!2.86e-16!605;UBERON:0005423!2.86e-16!605;UBERON:0005256!3.17e-16!143;UBERON:0003914!1.26e-15!118;UBERON:0000922!1.39e-15!612;UBERON:0004290!1.59e-15!70;UBERON:0000486!4.38e-15!82;UBERON:0001009!8.77e-15!113;UBERON:0002049!1.15e-14!79;UBERON:0007798!1.15e-14!79;UBERON:0000064!3.73e-14!219;UBERON:0004535!1.23e-13!110;UBERON:0002100!7.55e-13!216;UBERON:0001134!1.02e-12!61;UBERON:0002036!1.02e-12!61;UBERON:0003082!1.02e-12!61;UBERON:0004872!1.08e-12!84;UBERON:0000055!1.64e-12!69;UBERON:0001981!1.75e-12!60;UBERON:0007500!1.75e-12!60;UBERON:0004537!1.75e-12!60;UBERON:0006965!1.75e-12!60;UBERON:0002385!3.44e-12!63;UBERON:0001015!3.44e-12!63;UBERON:0000383!3.44e-12!63;UBERON:0003104!9.78e-12!238;UBERON:0009142!9.78e-12!238;UBERON:0000490!1.82e-11!138;UBERON:0000033!1.64e-10!123;UBERON:0001637!6.47e-10!42;UBERON:0003509!6.47e-10!42;UBERON:0004572!6.47e-10!42;UBERON:0004121!9.25e-10!169;UBERON:0001017!3.77e-09!82;UBERON:0000924!8.08e-09!173;UBERON:0006601!8.08e-09!173;UBERON:0000153!1.27e-08!129;UBERON:0007811!1.27e-08!129;UBERON:0005743!1.33e-08!86;UBERON:0000955!2.31e-08!69;UBERON:0006238!2.31e-08!69;UBERON:0003103!4.73e-08!69;UBERON:0000073!7.47e-08!94;UBERON:0001016!7.47e-08!94;UBERON:0003075!1.03e-07!86;UBERON:0007284!1.03e-07!86;UBERON:0004573!1.07e-07!33;UBERON:0004571!1.07e-07!33;UBERON:0001986!1.96e-07!18;UBERON:0004638!1.96e-07!18;UBERON:0004852!1.96e-07!18;UBERON:0004211!2.39e-07!16;UBERON:0001285!2.39e-07!16;UBERON:0007684!2.39e-07!16;UBERON:0003220!2.39e-07!16;UBERON:0004208!2.39e-07!16;UBERON:0000487!3.13e-07!22;UBERON:0001950!3.81e-07!20;UBERON:0006914!3.99e-07!25;UBERON:0000956!4.40e-07!25;UBERON:0000203!4.40e-07!25;UBERON:0006555!4.85e-07!17;UBERON:0005103!4.85e-07!17;UBERON:0000083!4.85e-07!17;UBERON:0009201!4.85e-07!17;UBERON:0004819!4.85e-07!17;UBERON:0006553!4.85e-07!17;UBERON:0003074!4.85e-07!17;UBERON:0003060!4.85e-07!17;UBERON:0002616!5.11e-07!59;UBERON:0002619!5.90e-07!22;UBERON:0000080!7.66e-07!18;UBERON:0002120!7.66e-07!18;UBERON:0004875!7.66e-07!18;UBERON:0005721!7.66e-07!18;UBERON:0005754!7.66e-07!18;UBERON:0007297!7.66e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.66e-08;74!UBERON:0007500;9.22e-08;56!UBERON:0001981;9.22e-08;56!UBERON:0004537;9.22e-08;56!UBERON:0004638;1.33e-07;18!UBERON:0001986;1.33e-07;18!UBERON:0004852;1.33e-07;18!UBERON:0000487;1.80e-07;22!UBERON:0001637;2.63e-07;42!UBERON:0003509;2.63e-07;42!UBERON:0004572;2.63e-07;42!UBERON:0006914;2.63e-07;25!UBERON:0006555;3.06e-07;15!UBERON:0004819;3.06e-07;15!UBERON:0001285;3.06e-07;15!UBERON:0007684;3.06e-07;15!UBERON:0001950;3.20e-07;20!UBERON:0000956;3.43e-07;25!UBERON:0000203;3.43e-07;25!UBERON:0002619;4.76e-07;22!UBERON:0000490;4.96e-07;33!UBERON:0004573;5.87e-07;33!UBERON:0004571;5.87e-07;33!UBERON:0002049;9.03e-07;75!UBERON:0007798;9.03e-07;75 | |||
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| ||
|short_description=p2@AK1 | |||
}} | }} |
Latest revision as of 06:05, 25 September 2015
Short description: | p2@AK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AK1_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_ENST00000550992_5end |
EntrezGene: | AK1 |
HGNC: | 361 |
UniProt: | F8VRY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.14e-17 | 121 |
embryonic cell | 5.32e-17 | 250 |
electrically responsive cell | 4.58e-13 | 61 |
electrically active cell | 4.58e-13 | 61 |
muscle precursor cell | 6.06e-13 | 58 |
myoblast | 6.06e-13 | 58 |
multi-potent skeletal muscle stem cell | 6.06e-13 | 58 |
muscle cell | 1.75e-12 | 55 |
smooth muscle cell | 2.58e-11 | 43 |
smooth muscle myoblast | 2.58e-11 | 43 |
vascular associated smooth muscle cell | 2.79e-08 | 32 |
meso-epithelial cell | 7.06e-08 | 45 |
endothelial cell | 8.19e-08 | 36 |
fibroblast | 1.23e-07 | 76 |
blood vessel endothelial cell | 1.84e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.84e-07 | 18 |
epithelial cell of nephron | 2.69e-07 | 15 |
endothelial cell of vascular tree | 8.80e-07 | 24 |