FFCP PHASE1:Hg19::chr9:131684593..131684600,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:131684593..131684600,+ to FFCP PHASE1:Hg19::chr9:131684593..131684600,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=254295 | |EntrezGene=254295 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23396 | |HGNC=23396 | ||
|TSSclassifier=strong | |||
|UniProt=F8WCG7 | |UniProt=F8WCG7 | ||
|association_with_transcript=0bp_to_ENST00000451000_5end | |||
|cluster_id=chr9:131684593..131684600,+ | |||
|description=CAGE_peak_3_at_PHYHD1_5end | |||
|id=chr9:131684593..131684600,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.24e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0002521;4.83e-10;3!CL:0000362;1.41e-08;9!CL:0002561;8.29e-08;2!CL:0002159;1.86e-07;14!CL:0002554;2.21e-07;2!CL:0000317;5.68e-07;2!CL:1000448;5.68e-07;2!CL:0002195;5.68e-07;2!CL:0002308;5.68e-07;2!CL:0002571;5.68e-07;2!CL:0002140;5.68e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,2.23e-10,3;CL:0000362,9.54e-09,9;CL:0002561,8.14e-08,2;CL:0002159,1.10e-07,14;CL:0002554,1.37e-07,2;CL:0000317,3.86e-07,2;CL:1000448,3.86e-07,2;CL:0002308,3.86e-07,2;CL:0002140,3.86e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.21e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.91e-13!365;UBERON:0007023!1.06e-09!115;UBERON:0000481!1.92e-09!347;UBERON:0000468!2.21e-09!659;UBERON:0000119!1.27e-07!312;UBERON:0000483!1.32e-07!309;UBERON:0000033!1.87e-07!123;UBERON:0004121!2.13e-07!169;UBERON:0000153!3.11e-07!129;UBERON:0007811!3.11e-07!129;UBERON:0000924!3.14e-07!173;UBERON:0006601!3.14e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.57e-10;3!UBERON:0004054;1.57e-10;3!UBERON:0002190;4.83e-10;3!UBERON:0002365;5.03e-08;31!UBERON:0002330;5.03e-08;31!UBERON:0005904;5.50e-08;4!UBERON:0005933;8.29e-08;2!UBERON:0005942;8.29e-08;2!UBERON:0005932;8.29e-08;2!UBERON:0002107;5.65e-07;19!UBERON:0006925;5.65e-07;19!UBERON:0002419;5.68e-07;2!UBERON:0007771;5.68e-07;2!UBERON:0003297;5.68e-07;2!UBERON:0001821;5.68e-07;2!UBERON:0003487;5.68e-07;2!UBERON:0001820;5.68e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.62e-10,3;UBERON:0004054,1.62e-10,3;UBERON:0002190,2.23e-10,3;UBERON:0005904,5.65e-08,4;UBERON:0005933,8.14e-08,2;UBERON:0005942,8.14e-08,2;UBERON:0005932,8.14e-08,2;UBERON:0002365,8.62e-08,31;UBERON:0002330,8.62e-08,31;UBERON:0002419,3.86e-07,2;UBERON:0007771,3.86e-07,2;UBERON:0003297,3.86e-07,2;UBERON:0001821,3.86e-07,2;UBERON:0003487,3.86e-07,2;UBERON:0001820,3.86e-07,2;UBERON:0005089,3.86e-07,2;UBERON:0005088,3.86e-07,2;UBERON:0002107,9.29e-07,19;UBERON:0006925,9.29e-07,19;UBERON:0008836,9.29e-07,19 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0,0,0,0,2.53299878168311,1.89515962028049,1.30592814099919,0.491467873003018,0,0.218441372130172,0.263766978228454,0.74259811776028,0,0,0.602694528023977,0,0,0.738726348460727,0.204000691244253,0,0.572471974262113,0.684372125364421,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0.6024118375565,0,0,0,0.293600439334847,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0.535081656179426,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,4.87613732627923,2.01210257911091,0.511450247374121,0.361439152384566,0.50133791063589,1.01392563272577,0.795285947051099,0,0.472674085820339,0.886917589850256,0.263504357079378,0.458426764241994,1.82147644146271,0,0.324547393654683,0,0,0,0,0.371457501329565,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0.286836620748814,0.354668382198357,0.560677600142307,0,0.24666754841716,0.933633106199299,0.134710672069688,0,0.151357427644931,0.576175924479999,0.70296429550139,1.87296046098192,0,0.896692083310806,0.117434498643765,0,0.140450806702248,0.204154171254893,0.122834317311768,0.309977343527296,0,0.247266929278557,1.82032272387605,2.15585442544872,0,0.625592599359821,0.277064115484183,0.877955241761676,0.919463387397059,0.600952235626387,0.453728732640084,0.717558542755448,0.640672166455702,0.635795703478686,0,0.309157587715317,0.515281080091258,0.18611685633159,0.506328996723799,0.487185025805993,0.757301322732344,0.368199594569197,1.93975268182574,0.355009592516614,0.403008392910561,1.01736355386293,0,0.272746120590835,0,0.243947412259191,0.530119073285941,0.69716365721711,0.10366105501537,0,0.36497735907583,0,0,0,2.78620756819187,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,1.47008711385542,5.07020139287323,0,1.18157981336281,0,0,0,1.53650399572076,0,0.402115889646523,0.925884451585296,0,0,0,0.463721619900307,0.352226082707465,0,0,0,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0,0,0,0,0,0,0,0,0.380987365753014,0,0,0,0.102827492703324,0.600686115687835,0.571652865261156,0.112131084345361,0,0.22001485746285,0.129271715757778,3.57656445851882,0,0.26593811658487,0,1.02882949704857,1.41849132023278,0.266422179016099,1.00084595560703,3.25572963234866,0.823240336780769,0,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0.36807447515742,1.00034104211935,0.813795071099207,0.415941723061614,0.356857977594324,0.788512075169673,0.117141414992713,0.902838299183157,0,0,0,0.368738337083406,0.868836144680828,0.979005787313703,0.343143423810856,0,0,0,0.909382714338778,0,0.907170879989041,0.248107807818777,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.574890092096664,0.519254429183621,0.116210378459959,0,0,0,0.34444334449382,0.182091168006717,0.131124414959424,0.451199612907412,0.231046011313244,1.56869953835371,0,0,0,0,0,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0.256450125116389,1.31205858279882,0.650756789328606,0.721287081534056,0,0,1.14853107599234,1.95018073810956,0,1.25671933779759,0.308097234229289,0.307007349452259,0.137836572484531,1.6113036730241,0.435050081742686,0.170453254832202,0.534192213880424,0.330569830721956,1.34533047155574,0.510450849978337,0.10115778085555,0.464845549297286,0,0,0.616067160352178,0,0,0,0.143124886741991,0,0.632758849437452,0.190630193923825,0.255897791311334,0.855877976067841,0.318203247925937,0,0.179872457583315,0.54907405947211,0.353437207037059,0,0,0.421258456238981,0,0.243713489631284,0,0.272999822815972,0.565621727814851,1.13008116620243,0,0,0,1.15755106853338,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0,0.633322905892992,0.329294892959902,0,1.04980416073495,0.673554789078584,0,0,1.31801321087491,0.43050537267123,0,0.886860307073351,0.918893600827838,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0.185803175125719,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.71623345421307,0.890894042497916,0.307160702099232,1.9882952955326,0.281338832821026,0,0,0,0.597743964753209,0.276283915531148,0,0,0,0,0.718946809178615,0,0,0.394573622547734,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.844175070377856,0,0.442317039724898,0,0.219385397153973,0.32681539055697,0,0.692552326534174,0,0,1.07709173291727,0.54323685961004,1.5950057986596,0.183195186803725,0.533034776018635,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.606610196826093,0.802577647298789,0.234264445725339,0,1.56531695145672,0,3.55125962564451,1.20990716048664,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.678923115418936,0,0.451961481561065,0,0,0.253243183823515,0,0,0.426905989478705,0,0,0,0,0,0.869767748958028,0,0,0,0,0,0,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| ||
|short_description=p3@PHYHD1 | |||
}} | }} |
Latest revision as of 21:23, 15 September 2015
Short description: | p3@PHYHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PHYHD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000451000_5end |
EntrezGene: | PHYHD1 |
HGNC: | 23396 |
UniProt: | F8WCG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 2.23e-10 | 3 |
epidermal cell | 9.54e-09 | 9 |
outer root sheath cell | 8.14e-08 | 2 |
general ecto-epithelial cell | 1.10e-07 | 14 |
fibroblast of lymphatic vessel | 1.37e-07 | 2 |
sebum secreting cell | 3.86e-07 | 2 |
epithelial cell of sweat gland | 3.86e-07 | 2 |
epithelial cell of skin gland | 3.86e-07 | 2 |
acinar cell of sebaceous gland | 3.86e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.62e-10 | 3 |
internal male genitalia | 1.62e-10 | 3 |
subcutaneous adipose tissue | 2.23e-10 | 3 |
duct of male reproductive system | 5.65e-08 | 4 |
hair root sheath | 8.14e-08 | 2 |
hair outer root sheath | 8.14e-08 | 2 |
bulb of hair follicle | 8.14e-08 | 2 |
exocrine gland | 8.62e-08 | 31 |
exocrine system | 8.62e-08 | 31 |
skin gland | 3.86e-07 | 2 |
epidermis gland | 3.86e-07 | 2 |
gland of integumental system | 3.86e-07 | 2 |
sebaceous gland | 3.86e-07 | 2 |
skin sebaceous gland | 3.86e-07 | 2 |
sweat gland | 3.86e-07 | 2 |
sweat gland placode | 3.86e-07 | 2 |
sebaceous gland placode | 3.86e-07 | 2 |
liver | 9.29e-07 | 19 |
digestive gland | 9.29e-07 | 19 |
liver bud | 9.29e-07 | 19 |