FFCP PHASE1:Hg19::chr9:132222825..132222843,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:132222825..132222843,+ to FFCP PHASE1:Hg19::chr9:132222825..132222843,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:132222825..132222843,+ | |||
|coexpression_cluster_id=C4802 | |||
|description=CAGE_peak_at_chr9:132222825..132222843,+ | |||
|id=chr9:132222825..132222843,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.03e-26!76;CL:0000860!1.42e-23!45;CL:0002057!1.56e-23!42;CL:0000557!2.05e-21!71;CL:0000839!8.63e-20!70;CL:0002194!1.52e-18!63;CL:0000576!1.52e-18!63;CL:0000040!1.52e-18!63;CL:0000559!1.52e-18!63;CL:0002009!4.26e-18!65;CL:0000763!2.40e-17!112;CL:0000049!2.40e-17!112;CL:0000738!2.40e-14!140;CL:0000037!3.18e-11!172;CL:0000566!3.18e-11!172;CL:0002032!5.63e-11!165;CL:0000837!5.63e-11!165;CL:0002031!1.25e-10!124;CL:0000988!1.76e-10!182;CL:0002087!4.72e-10!119;CL:0000094!5.47e-07!8;CL:0002393!9.02e-07!9;CL:0002397!9.02e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.86e-45;33!CL:0002057;6.86e-45;33!CL:0000576;1.60e-36;48!CL:0000473;9.48e-32;39!CL:0000234;9.48e-32;39!CL:0000766;4.40e-28;69!CL:0000094;2.44e-15;8!CL:0002393;1.53e-13;6!CL:0002397;1.53e-13;6!CL:0000763;1.63e-12;100!CL:0000081;8.53e-11;11!CL:0000738;4.97e-10;136!CL:0002087;8.13e-10;104!CL:0000775;7.91e-09;3!CL:0000623;1.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.83e-63,42;CL:0002057,1.83e-63,42;CL:0000766,4.08e-61,72;CL:0000473,3.66e-54,48;CL:0000234,3.66e-54,48;CL:0000557,4.83e-48,67;CL:0000839,3.87e-46,66;CL:0002194,1.10e-43,59;CL:0000576,1.10e-43,59;CL:0000040,1.10e-43,59;CL:0000559,1.10e-43,59;CL:0002009,6.37e-42,61;CL:0000738,1.01e-40,136;CL:0000763,2.13e-38,108;CL:0000049,2.13e-38,108;CL:0000037,1.34e-31,168;CL:0000988,1.86e-30,177;CL:0002032,2.29e-29,161;CL:0000837,2.29e-29,161;CL:0002031,3.11e-29,120;CL:0002087,5.92e-29,115;CL:0000094,1.87e-15,8;CL:0002393,2.23e-15,9;CL:0002397,2.23e-15,9;CL:0000081,7.07e-11,11;CL:0000134,8.15e-11,354;CL:0000034,2.26e-10,441;CL:0002320,2.59e-10,361;CL:0000219,2.67e-10,386;CL:0000723,1.21e-09,433;CL:0000048,1.80e-09,427;CL:0000775,6.09e-09,3;CL:0000623,1.26e-07,3;CL:0000825,1.26e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.13e-45;42!CL:0000049;1.35e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.66e-18!86;UBERON:0002371!7.98e-18!80;UBERON:0002390!2.45e-17!102;UBERON:0003061!2.45e-17!102;UBERON:0002193!7.20e-14!112;UBERON:0004765!9.15e-14!101;UBERON:0001434!9.15e-14!101;UBERON:0003081!9.85e-11!216;UBERON:0002405!1.44e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.23e-41,76;UBERON:0002390,1.17e-40,98;UBERON:0003061,1.17e-40,98;UBERON:0001474,3.00e-39,82;UBERON:0002193,1.08e-35,108;UBERON:0004765,1.01e-34,90;UBERON:0002405,2.45e-33,93;UBERON:0001434,4.38e-30,100;UBERON:0003081,7.42e-25,203;UBERON:0002204,3.33e-17,167;UBERON:0000926,1.95e-11,315;UBERON:0004120,1.95e-11,315;UBERON:0006603,1.95e-11,315;UBERON:0002384,1.25e-09,371 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0.872338524100369,0,0.631719873426831,0,0,1.39560233594486,0,0.263766978228454,0.247532705920093,0.331397375727916,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0.408001382488506,0.313454721478088,0,0.410623275218653,0.502170558379211,0,0.164201178899891,0.0787107813136792,0.786728553697808,1.53531759238885,2.47705797305722,0,0,0,0,0,0,1.66198622559563,1.80490002723128,2.17010870715852,0.447830948479849,0,1.28787783817093,2.61716829803216,1.88937971844405,2.42584061187816,1.16214518452842,2.05583944010913,2.78735733805593,1.7261543539329,1.5369642391746,0.945928919554341,1.37898272294647,1.93645405075148,2.70852973188684,2.63539275359647,1.36453075028923,2.47195832889593,1.53041946185451,1.28371610830437,2.55734850319616,1.64925650093358,1.19678194572979,1.70489900213078,0.870627715885752,1.70215567407342,3.11411124497787,2.51248665256743,2.08593167368081,3.9093992046921,0,0,0.632924774881769,1.47878700418359,1.27562579979026,2.93522103711726,1.23561494261145,1.05123824989054,1.12507910687956,1.14005097496499,0.59675003159727,1.64397738388171,0,0,0,0,0,0,0,0,0,0,0.764546456250458,3.96513985737078,1.12101712596307,0.526768169550154,0.786839080455332,0.786021525498329,0.616804496998528,0,0,0,0,0.222820913770347,0.294605907474837,0.221533894583621,0,0.512365278902701,0.520237390239513,0.493313713811028,0.276350017785848,0,0.14828656316206,0.535081656179426,0,0.113309342697566,1.91610246800961,0,0.506039384039006,0.95569624297229,0,0,0.150575119077773,0,0,0.710331756132051,0,2.62088766192152,1.87208137048455,0.868946423296794,0,0,0.255725123687061,0.361439152384566,0,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0,0,0.370784442784429,0,0,0.132957960518865,0.238490624305342,0,1.11437250398869,0,1.72046919021225,0,0.56530794192401,0,0.275118041940067,0.626984899610432,0,0.35576626268671,0,0,0.760272105718513,0.488124115096339,0,0,0,0.22452937262617,0,0,0,0.183201743930407,5.27121669744253,3.87780264148325,0,0,0.25326102332916,0,0.573673241497627,0.354668382198357,0,1.06748995729705,0,0,0.134710672069688,0.326923806226917,0,0,0.234321431833797,0.624320153660641,1.71141546463335,0,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0.103325781175765,1.18800285728205,0.494533858557114,0,0,0,0.375355559615893,0,0,0,0.300476117813194,0,0,0,0.211931901159562,0.600182192168805,0.206105058476878,0.257640540045629,0.37223371266318,0.337552664482532,0.292311015483596,0,0.0920498986422993,0.323292113637624,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0,0,0.709840800239063,0.337169380156203,0,0.441175890929576,0.217879444092406,0,0.269662616320329,0.588664395376038,0.769494313892781,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0.231860809950154,0.117408694235822,0,0,0.190254152234598,0.790204397959275,1.71697232418975,0.246217006087397,0.234004265139238,0.297262324577456,0,0,0,0,0,0.766765358330422,0.492663237895943,0.704387472105808,7.46381215946779,3.89123874225796,5.42842463733434,0.253991577168676,0.763976851116555,2.34434894420094,1.71072446022705,0.308482478109971,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0.514414748524284,0,0.266422179016099,0,0.542621605391443,0,0,0,0.791951872933429,0,0.871533458600294,0.199945982364114,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0.179060963239896,0,1.18218456121156,2.58753089831421,1.66845947163673,0,1.30139853857622,0.773288812777695,0.502548796003046,1.27587750330633,4.49404214368309,2.99161459204025,11.603634376209,0.24538298343828,0,0,0,0,0.157702415033935,0,0.300946099727719,0,2.0694614258501,0,0.737476674166813,0.0868836144680828,0,0.343143423810856,0.206768026122887,2.37285620900479,1.28073069364133,1.81876542867756,0,0.30239029332968,0,0.153461973288062,0,0,0,0.482561763430822,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.232420756919918,0.241718899183244,0,0.184161977871793,0.114814448164607,0.182091168006717,0.262248829918848,0.902399225814824,0.0770153371044148,0,0,0.105551628892876,2.27466768141793,0.170093705276516,0,1.54227252690289,0,1.00337954770971,0,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0,0.515205058238611,0.366277859273374,0.247528499761764,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.413509717453592,0,0,0.340906509664404,0.0890320356467374,0.165284915360978,0.192190067365106,0.127612712494584,0.30347334256665,0,0,0,1.23213432070436,0.532306030317022,0,0,0.429374660225974,0,0,0,0,0,1.27281299170375,0.78494864019923,0,0,0,0.202182481573316,1.58510321173008,0,0,0,1.05650146756755,0,0.707027159768564,0,0.551365343546124,0.66343897524122,0,0,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,1.04980416073495,0,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,2.27858874869665,0,0.822724546172388,0,1.62009431171434,1.58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| ||
|short_description=p@chr9:132222825..132222843,+ | |||
}} | }} |
Latest revision as of 23:25, 31 July 2015
Short description: | p@chr9:132222825..132222843, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:132222825..132222843, + |
Coexpression cluster: | C4802_Mast_Neutrophils_Eosinophils_Natural_CD14_Basophils_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.23e-41 | 76 |
hematopoietic system | 1.17e-40 | 98 |
blood island | 1.17e-40 | 98 |
bone element | 3.00e-39 | 82 |
hemolymphoid system | 1.08e-35 | 108 |
skeletal element | 1.01e-34 | 90 |
immune system | 2.45e-33 | 93 |
skeletal system | 4.38e-30 | 100 |
lateral plate mesoderm | 7.42e-25 | 203 |
musculoskeletal system | 3.33e-17 | 167 |
mesoderm | 1.95e-11 | 315 |
mesoderm-derived structure | 1.95e-11 | 315 |
presumptive mesoderm | 1.95e-11 | 315 |
connective tissue | 1.25e-09 | 371 |