FFCP PHASE1:Hg19::chr9:133736506..133736518,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:133736506..133736518,+ to FFCP PHASE1:Hg19::chr9:133736506..133736518,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:133736506..133736518,+ | |||
|coexpression_cluster_id=C2844 | |||
|description=CAGE_peak_at_chr9:133736506..133736518,+ | |||
|id=chr9:133736506..133736518,+ | |||
|ontology_enrichment_celltype=CL:0000359!6.84e-19!32;CL:0000192!7.76e-17!42;CL:0000514!7.76e-17!42;CL:0000680!4.61e-16!57;CL:0000056!4.61e-16!57;CL:0000355!4.61e-16!57;CL:0000187!5.95e-15!54;CL:0000183!5.78e-13!59;CL:0000393!1.31e-12!60;CL:0000211!1.31e-12!60;CL:0000055!2.32e-08!180;CL:0000569!7.37e-08!4;CL:0000011!7.37e-08!4;CL:0000222!1.18e-07!119;CL:0002539!2.73e-07!10;CL:0002494!5.33e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000569;1.77e-17;4!CL:0000134;3.47e-16;55!CL:0000048;6.78e-16;58!CL:0000723;7.45e-16;61!CL:0000034;1.05e-11;69!CL:0002583;3.18e-09;2!CL:0002494;9.52e-09;16!CL:0002195;1.14e-08;2!CL:0002571;1.14e-08;2!CL:0002334;1.88e-08;12!CL:0002539;9.24e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,1.53e-17,4;CL:0000011,1.53e-17,4;CL:0000048,7.82e-11,427;CL:0000723,1.51e-10,433;CL:0000034,3.51e-10,441;CL:0002583,2.53e-09,2;CL:0002494,9.07e-09,16;CL:0002195,1.05e-08,2;CL:0002571,1.05e-08,2;CL:0002334,1.66e-08,12;CL:0000134,3.60e-08,354;CL:0002320,7.50e-08,361;CL:0000219,9.83e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000011;1.77e-17;4 | |||
|ontology_enrichment_disease=DOID:2394!4.70e-16!14;DOID:193!4.45e-08!29;DOID:120!1.03e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.77e-34;14!DOID:120;1.91e-16;27!DOID:193;3.76e-15;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.93e-34,14;DOID:120,2.19e-16,27;DOID:193,4.27e-15,29 | |||
|ontology_enrichment_uberon=UBERON:0001637!6.99e-16!42;UBERON:0003509!6.99e-16!42;UBERON:0004572!6.99e-16!42;UBERON:0004573!2.15e-15!33;UBERON:0004571!2.15e-15!33;UBERON:0002385!1.17e-14!63;UBERON:0001015!1.17e-14!63;UBERON:0000383!1.17e-14!63;UBERON:0001134!2.08e-14!61;UBERON:0002036!2.08e-14!61;UBERON:0003082!2.08e-14!61;UBERON:0001981!4.51e-14!60;UBERON:0007500!4.51e-14!60;UBERON:0004537!4.51e-14!60;UBERON:0006965!4.51e-14!60;UBERON:0004872!2.34e-13!84;UBERON:0000055!5.15e-13!69;UBERON:0003914!3.28e-12!118;UBERON:0002049!4.49e-12!79;UBERON:0007798!4.49e-12!79;UBERON:0004290!2.03e-11!70;UBERON:0000486!3.60e-11!82;UBERON:0001009!8.32e-11!113;UBERON:0000914!8.79e-11!83;UBERON:0002329!8.79e-11!83;UBERON:0003077!8.79e-11!83;UBERON:0003059!8.79e-11!83;UBERON:0007282!8.79e-11!83;UBERON:0009618!8.79e-11!83;UBERON:0007285!8.79e-11!83;UBERON:0004535!1.22e-10!110;UBERON:0000992!2.51e-09!13;UBERON:0002118!2.80e-09!5;UBERON:0004532!2.80e-09!5;UBERON:0000490!4.47e-08!138;UBERON:0004237!2.73e-07!10;UBERON:0004695!2.73e-07!10;UBERON:0002111!2.73e-07!10;UBERON:0004178!2.73e-07!10;UBERON:0000948!4.13e-07!24;UBERON:0005498!4.13e-07!24;UBERON:0004140!4.13e-07!24;UBERON:0009881!4.13e-07!24;UBERON:0004141!4.13e-07!24;UBERON:0003084!4.13e-07!24;UBERON:0007005!4.13e-07!24;UBERON:0004139!4.13e-07!24;UBERON:0004291!4.13e-07!24;UBERON:0007100!4.54e-07!27;UBERON:0000947!5.03e-07!21;UBERON:0010191!5.03e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;1.78e-15;13!UBERON:0002118;2.44e-14;5!UBERON:0002119;3.18e-10;4!UBERON:0000991;3.53e-09;21!UBERON:0000948;2.82e-08;22!UBERON:0007100;3.63e-07;25!UBERON:0004237;9.24e-07;10!UBERON:0004695;9.24e-07;10!UBERON:0002111;9.24e-07;10!UBERON:0004178;9.24e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.82e-15,13;UBERON:0002118,2.44e-14,5;UBERON:0002119,3.29e-10,4;UBERON:0000991,3.59e-09,21;UBERON:0009196,3.59e-09,21;UBERON:0009117,3.59e-09,21;UBERON:0005564,3.59e-09,21;UBERON:0004176,1.04e-08,22;UBERON:0000948,1.61e-07,24;UBERON:0005498,1.61e-07,24;UBERON:0004140,1.61e-07,24;UBERON:0009881,1.61e-07,24;UBERON:0004141,1.61e-07,24;UBERON:0003084,1.61e-07,24;UBERON:0007005,1.61e-07,24;UBERON:0004139,1.61e-07,24;UBERON:0004291,1.61e-07,24;UBERON:0002384,2.04e-07,371;UBERON:0004573,9.38e-07,33;UBERON:0004571,9.38e-07,33 | |||
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| ||
|short_description=p@chr9:133736506..133736518,+ | |||
}} | }} |
Latest revision as of 23:36, 31 July 2015
Short description: | p@chr9:133736506..133736518, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:133736506..133736518, + |
Coexpression cluster: | C2844_Smooth_mesenchymal_Fibroblast_Preadipocyte_H9_Mesenchymal_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 1.53e-17 | 4 |
migratory trunk neural crest cell | 1.53e-17 | 4 |
multi fate stem cell | 7.82e-11 | 427 |
somatic stem cell | 1.51e-10 | 433 |
stem cell | 3.51e-10 | 441 |
subcutaneous preadipocyte | 2.53e-09 | 2 |
cardiocyte | 9.07e-09 | 16 |
hepatic stem cell | 1.05e-08 | 2 |
hepatic mesenchymal stem cell | 1.05e-08 | 2 |
preadipocyte | 1.66e-08 | 12 |
mesenchymal cell | 3.60e-08 | 354 |
connective tissue cell | 7.50e-08 | 361 |
motile cell | 9.83e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
female gonad | 1.82e-15 | 13 |
right ovary | 2.44e-14 | 5 |
left ovary | 3.29e-10 | 4 |
gonad | 3.59e-09 | 21 |
indifferent external genitalia | 3.59e-09 | 21 |
indifferent gonad | 3.59e-09 | 21 |
gonad primordium | 3.59e-09 | 21 |
external genitalia | 1.04e-08 | 22 |
heart | 1.61e-07 | 24 |
primitive heart tube | 1.61e-07 | 24 |
primary heart field | 1.61e-07 | 24 |
anterior lateral plate mesoderm | 1.61e-07 | 24 |
heart tube | 1.61e-07 | 24 |
heart primordium | 1.61e-07 | 24 |
cardiac mesoderm | 1.61e-07 | 24 |
cardiogenic plate | 1.61e-07 | 24 |
heart rudiment | 1.61e-07 | 24 |
connective tissue | 2.04e-07 | 371 |
systemic artery | 9.38e-07 | 33 |
systemic arterial system | 9.38e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.93e-34 | 14 |
female reproductive organ cancer | 2.19e-16 | 27 |
reproductive organ cancer | 4.27e-15 | 29 |