FFCP PHASE1:Hg19::chrX:31285029..31285040,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:31285029..31285040,- to FFCP PHASE1:Hg19::chrX:31285029..31285040,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1756 | |EntrezGene=1756 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2928 | |HGNC=2928 | ||
|TSSclassifier=strong | |||
|UniProt=E9PDN1,Q6NSJ9,Q8N754,P11532,Q16484 | |UniProt=E9PDN1,Q6NSJ9,Q8N754,P11532,Q16484 | ||
|association_with_transcript=-5bp_to_ENST00000361471,NM_004015,NM_004016,NM_004017,NM_004018,NM_004019,uc004dcm.1,uc004dcn.1,uc004dco.1,uc004dcp.1,uc010ngm.2,uc011mkb.1_5end | |||
|cluster_id=chrX:31285029..31285040,- | |||
|coexpression_cluster_id=C4870 | |||
|description=CAGE_peak_8_at_DMD_5end | |||
|id=chrX:31285029..31285040,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002590;8.60e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002590,8.19e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.87e-31!115;UBERON:0000955!7.64e-25!69;UBERON:0006238!7.64e-25!69;UBERON:0002616!4.20e-24!59;UBERON:0001017!7.08e-24!82;UBERON:0005743!8.77e-24!86;UBERON:0000033!5.36e-23!123;UBERON:0000153!7.72e-23!129;UBERON:0007811!7.72e-23!129;UBERON:0001049!1.12e-21!57;UBERON:0005068!1.12e-21!57;UBERON:0006241!1.12e-21!57;UBERON:0007135!1.12e-21!57;UBERON:0003075!1.67e-20!86;UBERON:0007284!1.67e-20!86;UBERON:0000073!3.42e-20!94;UBERON:0001016!3.42e-20!94;UBERON:0002346!1.94e-18!90;UBERON:0004121!1.18e-17!169;UBERON:0003080!1.50e-16!42;UBERON:0000924!1.98e-16!173;UBERON:0006601!1.98e-16!173;UBERON:0001893!2.10e-16!34;UBERON:0002020!6.90e-16!34;UBERON:0003528!6.90e-16!34;UBERON:0002780!7.49e-16!41;UBERON:0001890!7.49e-16!41;UBERON:0006240!7.49e-16!41;UBERON:0002791!1.07e-15!33;UBERON:0001869!1.48e-15!32;UBERON:0000481!7.19e-15!347;UBERON:0003056!9.56e-15!61;UBERON:0000475!3.89e-14!365;UBERON:0000477!2.15e-13!286;UBERON:0002619!3.15e-13!22;UBERON:0000956!5.71e-13!25;UBERON:0000203!5.71e-13!25;UBERON:0001950!8.24e-12!20;UBERON:0000062!1.87e-10!511;UBERON:0004111!3.21e-09!241;UBERON:0000119!1.35e-08!312;UBERON:0000025!2.39e-08!194;UBERON:0000064!5.30e-08!219;UBERON:0000483!6.32e-08!309;UBERON:0000468!2.11e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.99e-15;32!UBERON:0002791;2.94e-14;32!UBERON:0001893;1.35e-13;34!UBERON:0005284;1.61e-13;5!UBERON:0000955;7.72e-13;68!UBERON:0002780;8.69e-13;41!UBERON:0001890;8.69e-13;41!UBERON:0003528;1.80e-12;34!UBERON:0002020;1.80e-12;34!UBERON:0000956;1.22e-11;25!UBERON:0000203;1.22e-11;25!UBERON:0002619;1.90e-11;22!UBERON:0006876;5.64e-11;11!UBERON:0000073;1.80e-10;53!UBERON:0002616;1.80e-10;53!UBERON:0001017;5.15e-10;75!UBERON:0000369;1.28e-09;4!UBERON:0002435;1.28e-09;4!UBERON:0000204;1.28e-09;4!UBERON:0001016;6.25e-09;83!UBERON:0001950;9.22e-09;20!UBERON:0002021;1.99e-07;5!UBERON:0005383;2.26e-07;3!UBERON:0005382;2.26e-07;3!UBERON:0005904;9.84e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,7.31e-26,68;UBERON:0006238,7.31e-26,68;UBERON:0001017,4.61e-22,81;UBERON:0007023,1.56e-19,114;UBERON:0001016,5.23e-19,89;UBERON:0001869,8.06e-18,32;UBERON:0000073,8.21e-18,53;UBERON:0002616,8.21e-18,53;UBERON:0001049,1.55e-16,56;UBERON:0005068,1.55e-16,56;UBERON:0006241,1.55e-16,56;UBERON:0007135,1.55e-16,56;UBERON:0001893,1.56e-16,34;UBERON:0002780,1.98e-16,41;UBERON:0001890,1.98e-16,41;UBERON:0003080,1.98e-16,41;UBERON:0006240,1.98e-16,41;UBERON:0002791,1.23e-15,32;UBERON:0003056,3.26e-15,61;UBERON:0003528,1.71e-14,34;UBERON:0002020,1.71e-14,34;UBERON:0003075,2.38e-14,82;UBERON:0007284,2.38e-14,82;UBERON:0005284,1.69e-13,5;UBERON:0002346,2.36e-13,86;UBERON:0011216,7.11e-13,223;UBERON:0010314,4.74e-12,132;UBERON:0000956,1.81e-11,25;UBERON:0000203,1.81e-11,25;UBERON:0002619,2.43e-11,22;UBERON:0004121,2.85e-11,171;UBERON:0000924,2.85e-11,171;UBERON:0006601,2.85e-11,171;UBERON:0006876,5.33e-11,11;UBERON:0000369,3.06e-10,4;UBERON:0002435,3.06e-10,4;UBERON:0000204,3.06e-10,4;UBERON:0010082,3.06e-10,4;UBERON:0010371,7.49e-10,104;UBERON:0004111,4.00e-09,240;UBERON:0001950,1.62e-08,20;UBERON:0005383,6.18e-08,3;UBERON:0005382,6.18e-08,3;UBERON:0000025,2.48e-07,192;UBERON:0002021,4.35e-07,5;UBERON:0000119,7.09e-07,309;UBERON:0005904,9.05e-07,4 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.422863212287913,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.273748850145768,1.12988375635323,0,0.164201178899891,0.0787107813136792,0,0.383829398097213,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66221330396589,0,0,0,0,0,0.756278537312543,2.66075276955077,2.72287835648691,0.458426764241994,0.364295288292542,0,0,0.174129737299267,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,1.98788780678127,0.25326102332916,0.662045904066094,0,0,1.68203280042692,0,0.24666754841716,2.17847724779836,0.67355336034844,0,6.50836938873205,2.30470369792,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.919463387397059,0.600952235626387,0.226864366320042,0,0.213557388818567,0.635795703478686,0,0.206105058476878,1.28820270022815,2.41951913231067,0.337552664482532,0.487185025805993,0,0.184099797284599,0.484938170456436,0.355009592516614,0.10075209822764,0,0.386521706326594,0.272746120590835,0,0.121973706129595,0.265059536642971,0.348581828608555,0.725627385107593,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0,0.709840800239063,0.337169380156203,0.723033089650446,0.55146986366197,0.871517776369625,0.237270619111097,0.269662616320329,0.588664395376038,0.38474715694639,0.738155454624648,0,0.4115740113314,0,2.53510069643662,0,4.13552934676983,0,0.491953754172454,0.857839051492628,0.439001141634502,0,0.402115889646523,0.185176890317059,0,0,0,0.34779121492523,9.86233031580902,0,0,0,0,0,0,0.234004265139238,0,0.93733833986777,0.839910640994298,0.425325291727159,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672786506072164,4.3596006883328,0.2933531432838,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0,0,0,3.43147184779554,0,0,0,2.84313558994037,0,0.301439377059586,0,0.299918973546171,0,0,0,1.67737398844108,3.44585807502342,0,0.289562613335158,0,0,0,0,0,0,0,2.60279707715243,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.702848489956279,0.902838299183157,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0.61384789315225,0,0.640695746278505,0,0.965123526861645,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0.241718899183244,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0.647747748306418,0,0.270946437543853,0,0,0,0,0,0,0,0.656029291399411,0,1.44257416306811,0,0,0,0,4.82051789532479,0,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.534192213880424,0.165284915360978,0.384380134730212,0.382838137483752,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0.429374660225974,8.55964249527235,3.79655309662471,2.47819252100972,0,0,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0.48763373908959,0,0,1.09199929126389,0,0,0.551365343546124,0,0.438450885253763,0.578775534266688,0,0.608731130888112,0.6196469961995,0.563391205064483,0.286822704408103,0.491245205065606,0.35667105148125,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0.95497793895076,0,0,0.994147647766298,0.703347082052564,0.333926115068718,0,0,0.398495976502139,1.38141957765574,0,0,0,0.933118762985422,0,0,0,1.1837208676432,0,0,0.969332746095218,1.66982576691332,0,0,0,2.17499872630438,0.1137934482855,0,0,0,0,0,1.77148277162768,1.68835014075571,3.05163472634166,0.442317039724898,1.18219047581419,0.87754158861589,0.544692317594951,0.41827123283581,0.615602068030377,1.13942055847001,0,0.0897576444097721,0,0.31900115973192,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0.296521128680622,0.123563938946503,0.313265848516366,0.876214728748802,0.802577647298789,0.937057782901357,0.364909578431332,0.19566461893209,0,4.3404284313433,0,0.61214552326098,0.63186579628488,0.300646838828985,0.414752765588989,0,0,0,0,0,0,0,0,0.435296032902013,0.17472666824203,0,0.774050650312681,0.65780385377567,0.903270027585302,0.290967049465258,3.26547668758551,0.90392296312213,0,0,1.26621591911757,0,0,7.25740182113799,0.19980960958213,0,0,0,0,0,0.707082103850386,5.97978506723902,5.43934800824133,0.101998217636322,0.866851769704557,0,0.136905378891993,0,1.71906176567983,0.525774708558629,0.558564802544508,0.916641696046735,0.717873024576814,0,0.858452096273142,0.223171457441873,1.14211903227435,1.08089965062721,0,0.551482276150566,0.659326867049332,0.741438982396034,0.196854963029498,0,1.59045937961861,1.77064427945048,0.160753148465019,0,0,0.2249738915515,0,1.51873891645062,0,0.551639951094387,0.367182116944987,0,0,0.191915197319445,1.42939065274673,0,0,0,0,0,0,0,0,0,1.02586563574658,0,0.775697738169303,0.39669780522807,0,0,0.533937062838473,1.10043013569766,0,0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| ||
|short_description=p8@DMD | |||
}} | }} |
Latest revision as of 21:01, 24 September 2015
Short description: | p8@DMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_DMD_5end |
Coexpression cluster: | C4870_Lens_seminal_gall_Fibroblast_glioblastoma_Smooth_ductus |
Association with transcript: | -5bp_to_ENST00000361471, NM_004015, NM_004016, NM_004017, NM_004018, NM_004019, uc004dcm.1, uc004dcn.1, uc004dco.1, uc004dcp.1, uc010ngm.2, uc011mkb.1_5end |
EntrezGene: | DMD |
HGNC: | 2928 |
UniProt: | E9PDN1Q6NSJ9Q8N754P11532Q16484 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brain vasculature | 8.19e-09 | 3 |