FFCP PHASE1:Hg19::chrX:47078069..47078192,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:47078069..47078192,+ to FFCP PHASE1:Hg19::chrX:47078069..47078192,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5127 | |EntrezGene=5127 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8749 | |HGNC=8749 | ||
|TSSclassifier=strong | |||
|UniProt=Q00536,E5RGN0,E5RIY8,E5RIU4,F5H203,B7Z8T0,Q9BRL4 | |UniProt=Q00536,E5RGN0,E5RIY8,E5RIU4,F5H203,B7Z8T0,Q9BRL4 | ||
|association_with_transcript=0bp_to_ENST00000357227,ENST00000517426,ENST00000519758,ENST00000520893,ENST00000522234,ENST00000540311,ENST00000540877,NM_006201,uc004dho.2,uc011mlj.1,uc011mlk.1_5end | |||
|cluster_id=chrX:47078069..47078192,+ | |||
|description=CAGE_peak_1_at_CDK16_5end | |||
|id=chrX:47078069..47078192,+ | |||
|ontology_enrichment_celltype=CL:0002321!6.23e-24!248;CL:0000220!4.99e-23!246;CL:0000066!2.18e-21!254;CL:0000222!4.53e-12!119;CL:0000055!9.49e-11!180;CL:0000183!7.66e-09!59;CL:0000393!4.95e-07!60;CL:0000211!4.95e-07!60;CL:0000221!5.21e-07!71;CL:0000187!6.43e-07!54;CL:1000449!9.32e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000449;2.76e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.20e-24,250;CL:0000066,1.55e-21,253;CL:0000222,3.55e-12,121;CL:1000449,2.76e-07,15;CL:0000221,5.71e-07,72;CL:0000393,7.45e-07,61;CL:0000211,7.45e-07,61;CL:0000187,9.95e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!6.63e-18!312;UBERON:0000483!1.60e-17!309;UBERON:0000481!1.73e-13!347;UBERON:0000475!4.59e-13!365;UBERON:0000064!2.37e-12!219;UBERON:0000468!8.19e-12!659;UBERON:0000922!2.68e-11!612;UBERON:0003914!1.26e-10!118;UBERON:0000923!1.18e-09!604;UBERON:0005291!1.18e-09!604;UBERON:0006598!1.18e-09!604;UBERON:0002532!1.18e-09!604;UBERON:0002050!1.21e-09!605;UBERON:0005423!1.21e-09!605;UBERON:0003104!1.45e-09!238;UBERON:0009142!1.45e-09!238;UBERON:0000477!1.51e-09!286;UBERON:0002100!1.71e-09!216;UBERON:0000025!2.30e-09!194;UBERON:0000486!3.67e-09!82;UBERON:0005256!4.61e-09!143;UBERON:0000467!5.01e-09!625;UBERON:0000480!7.22e-09!626;UBERON:0001981!9.46e-09!60;UBERON:0007500!9.46e-09!60;UBERON:0004537!9.46e-09!60;UBERON:0006965!9.46e-09!60;UBERON:0004872!1.23e-08!84;UBERON:0004111!1.45e-08!241;UBERON:0002049!1.78e-08!79;UBERON:0007798!1.78e-08!79;UBERON:0000490!2.41e-08!138;UBERON:0004290!3.28e-08!70;UBERON:0000055!5.54e-08!69;UBERON:0000914!5.66e-08!83;UBERON:0002329!5.66e-08!83;UBERON:0003077!5.66e-08!83;UBERON:0003059!5.66e-08!83;UBERON:0007282!5.66e-08!83;UBERON:0009618!5.66e-08!83;UBERON:0007285!5.66e-08!83;UBERON:0001637!1.72e-07!42;UBERON:0003509!1.72e-07!42;UBERON:0004572!1.72e-07!42;UBERON:0003103!3.12e-07!69;UBERON:0001134!3.85e-07!61;UBERON:0002036!3.85e-07!61;UBERON:0003082!3.85e-07!61;UBERON:0000063!5.58e-07!97;UBERON:0004211!9.32e-07!16;UBERON:0001285!9.32e-07!16;UBERON:0007684!9.32e-07!16;UBERON:0003220!9.32e-07!16;UBERON:0004208!9.32e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.76e-07;15!UBERON:0004819;2.76e-07;15!UBERON:0001285;2.76e-07;15!UBERON:0007684;2.76e-07;15!UBERON:0003914;3.80e-07;74!UBERON:0000353;5.70e-07;15!UBERON:0006554;6.91e-07;30!UBERON:0001008;6.91e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,4.29e-18,309;UBERON:0000483,1.04e-17,306;UBERON:0003914,8.78e-11,117;UBERON:0007503,3.41e-10,78;UBERON:0002100,1.26e-09,199;UBERON:0000025,1.43e-09,192;UBERON:0000490,2.81e-09,148;UBERON:0000486,5.54e-09,83;UBERON:0000922,6.05e-09,592;UBERON:0004111,8.65e-09,240;UBERON:0003104,1.06e-08,160;UBERON:0009142,1.06e-08,160;UBERON:0007500,1.09e-08,59;UBERON:0001981,1.09e-08,59;UBERON:0004537,1.09e-08,59;UBERON:0006965,1.09e-08,59;UBERON:0004872,1.45e-08,83;UBERON:0002049,2.10e-08,78;UBERON:0007798,2.10e-08,78;UBERON:0007524,4.85e-08,73;UBERON:0002329,5.00e-08,71;UBERON:0003059,5.00e-08,71;UBERON:0007282,5.00e-08,71;UBERON:0004290,5.00e-08,71;UBERON:0009618,5.00e-08,71;UBERON:0003077,5.29e-08,72;UBERON:0007285,5.29e-08,72;UBERON:0005423,6.41e-08,581;UBERON:0000055,6.48e-08,68;UBERON:0001637,1.72e-07,42;UBERON:0003509,1.72e-07,42;UBERON:0004572,1.72e-07,42;UBERON:0003103,2.11e-07,68;UBERON:0004211,2.76e-07,15;UBERON:0009773,2.76e-07,15;UBERON:0001231,2.76e-07,15;UBERON:0001285,2.76e-07,15;UBERON:0007684,2.76e-07,15;UBERON:0004208,2.76e-07,15;UBERON:0005256,5.31e-07,122;UBERON:0001134,5.81e-07,62;UBERON:0002036,5.81e-07,62;UBERON:0003082,5.81e-07,62;UBERON:0000353,5.89e-07,15 | |||
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| ||
|short_description=p1@CDK16 | |||
}} | }} |
Latest revision as of 05:52, 25 September 2015
Short description: | p1@CDK16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDK16_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000357227, ENST00000517426, ENST00000519758, ENST00000520893, ENST00000522234, ENST00000540311, ENST00000540877, NM_006201, uc004dho.2, uc011mlj.1, uc011mlk.1_5end |
EntrezGene: | CDK16 |
HGNC: | 8749 |
UniProt: | Q00536E5RGN0E5RIY8E5RIU4F5H203B7Z8T0Q9BRL4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.20e-24 | 250 |
epithelial cell | 1.55e-21 | 253 |
mesodermal cell | 3.55e-12 | 121 |
epithelial cell of nephron | 2.76e-07 | 15 |
ectodermal cell | 5.71e-07 | 72 |
electrically responsive cell | 7.45e-07 | 61 |
electrically active cell | 7.45e-07 | 61 |
muscle cell | 9.95e-07 | 55 |