FFCP PHASE1:Hg19::chrX:70443751..70443762,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:70443751..70443762,+ to FFCP PHASE1:Hg19::chrX:70443751..70443762,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2705 | |EntrezGene=2705 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4283 | |HGNC=4283 | ||
|TSSclassifier=strong | |||
|UniProt=P08034 | |UniProt=P08034 | ||
|association_with_transcript=193bp_to_AB590364,BT019329,DQ893515,DQ896494_5end | |||
|cluster_id=chrX:70443751..70443762,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_11_at_GJB1_5end | |||
|id=chrX:70443751..70443762,+ | |||
|ontology_enrichment_celltype=CL:0000313!7.29e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002567;1.71e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.60e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.81e-40;1!UBERON:0004161;1.81e-15;11!UBERON:0009497;2.94e-13;13 | |||
|ontology_enrichment_disease=DOID:0050619!5.14e-07!1;DOID:1357!5.14e-07!1;DOID:2152!7.29e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1909;5.15e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,6.96e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.46e-19!115;UBERON:0001896!6.00e-18!3;UBERON:0005290!6.00e-18!3;UBERON:0010096!6.00e-18!3;UBERON:0001049!3.35e-16!57;UBERON:0005068!3.35e-16!57;UBERON:0006241!3.35e-16!57;UBERON:0007135!3.35e-16!57;UBERON:0002616!2.92e-13!59;UBERON:0000955!1.19e-12!69;UBERON:0006238!1.19e-12!69;UBERON:0001017!5.67e-12!82;UBERON:0002298!8.71e-12!8;UBERON:0005743!2.73e-11!86;UBERON:0000073!5.80e-10!94;UBERON:0001016!5.80e-10!94;UBERON:0003075!7.25e-10!86;UBERON:0007284!7.25e-10!86;UBERON:0003076!1.71e-09!15;UBERON:0003057!1.71e-09!15;UBERON:0002780!2.56e-09!41;UBERON:0001890!2.56e-09!41;UBERON:0006240!2.56e-09!41;UBERON:0002346!2.60e-09!90;UBERON:0003080!4.55e-09!42;UBERON:0000033!3.40e-08!123;UBERON:0004733!6.85e-08!12;UBERON:0002028!6.85e-08!12;UBERON:0007277!6.85e-08!12;UBERON:0000153!1.12e-07!129;UBERON:0007811!1.12e-07!129;UBERON:0000998!2.67e-07!1;UBERON:0006868!2.67e-07!1;UBERON:0004732!2.74e-07!13;UBERON:0002336!4.57e-07!1;UBERON:0001018!4.57e-07!1;UBERON:0002473!4.57e-07!1;UBERON:0005340!4.57e-07!1;UBERON:0002316!4.57e-07!1;UBERON:0003544!4.57e-07!1;UBERON:0001020!4.57e-07!1;UBERON:0005970!4.57e-07!1;UBERON:0002437!4.57e-07!1;UBERON:0003112!4.85e-07!1;UBERON:0000032!4.85e-07!1;UBERON:0005253!4.85e-07!1;UBERON:0003128!4.85e-07!1;UBERON:0002241!4.85e-07!1;UBERON:0001703!4.85e-07!1;UBERON:0004761!4.85e-07!1;UBERON:0009617!4.85e-07!1;UBERON:0001764!5.14e-07!1;UBERON:0001825!5.14e-07!1;UBERON:0001893!5.67e-07!34;UBERON:0004911!7.29e-07!1;UBERON:0002902!9.18e-07!1;UBERON:0009899!9.18e-07!1;UBERON:0007190!9.73e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;4.40e-15;25!UBERON:0002110;1.71e-14;3!UBERON:0002107;2.12e-09;19!UBERON:0006925;2.12e-09;19!UBERON:0002294;5.86e-07;7!UBERON:0001173;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,4.19e-15,25;UBERON:0000015,4.19e-15,25;UBERON:0002423,4.19e-15,25;UBERON:0006235,4.19e-15,25;UBERON:0004161,4.19e-15,25;UBERON:0002110,1.83e-14,3;UBERON:0006242,1.83e-14,3;UBERON:0002107,1.99e-09,19;UBERON:0006925,1.99e-09,19;UBERON:0008836,1.99e-09,19;UBERON:0008835,2.82e-08,22;UBERON:0003894,2.82e-08,22;UBERON:0009854,5.87e-08,23;UBERON:0003929,2.03e-07,54;UBERON:0005172,2.03e-07,54;UBERON:0005173,2.03e-07,54;UBERON:0007499,2.14e-07,25;UBERON:0009856,3.78e-07,26;UBERON:0002417,9.53e-07,60;UBERON:0000916,9.53e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66380584195206,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0.221858103073705,0.124192805882767,0,0,1.06154382279153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41023272848151,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0.392600934460972,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.231522474323834,0,0.940634592723046,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66380584195206,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0.221858103073705,0.124192805882767,0,0,1.06154382279153,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41023272848151,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.111855431797792,0.392600934460972,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.231522474323834,0,0.940634592723046,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p11@GJB1 | |||
}} | }} |
Latest revision as of 06:59, 16 September 2015
Short description: | p11@GJB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_GJB1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 193bp_to_AB590364, BT019329, DQ893515, DQ896494_5end |
EntrezGene: | GJB1 |
HGNC: | 4283 |
UniProt: | P08034 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.60e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 4.19e-15 | 25 |
anatomical boundary | 4.19e-15 | 25 |
hepatobiliary system | 4.19e-15 | 25 |
foregut-midgut junction | 4.19e-15 | 25 |
septum transversum | 4.19e-15 | 25 |
gallbladder | 1.83e-14 | 3 |
gall bladder primordium | 1.83e-14 | 3 |
liver | 1.99e-09 | 19 |
digestive gland | 1.99e-09 | 19 |
liver bud | 1.99e-09 | 19 |
hepatic diverticulum | 2.82e-08 | 22 |
liver primordium | 2.82e-08 | 22 |
digestive tract diverticulum | 5.87e-08 | 23 |
gut epithelium | 2.03e-07 | 54 |
abdomen element | 2.03e-07 | 54 |
abdominal segment element | 2.03e-07 | 54 |
epithelial sac | 2.14e-07 | 25 |
sac | 3.78e-07 | 26 |
abdominal segment of trunk | 9.53e-07 | 60 |
abdomen | 9.53e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
melanoma | 6.96e-21 | 2 |