FFCP PHASE1:Mm9::chr10:41238883..41238909,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:41238883..41238909,- to FFCP PHASE1:Mm9::chr10:41238883..41238909,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=480 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:41238883..41238909,- | |||
|description=CAGE_peak_at_chr10:41238883..41238909,- | |||
|id=chr10:41238883..41238909,- | |||
|ontology_enrichment_celltype=CL:0000063!2.96e-10!66;CL:0000988!4.83e-09!32;CL:0002032!4.83e-09!32;CL:0000037!4.83e-09!32;CL:0000566!4.83e-09!32;CL:0000837!4.83e-09!32;CL:0002563!3.47e-07!9;CL:0002251!3.47e-07!9;CL:0000838!4.03e-07!12;CL:0000542!8.88e-07!13;CL:0000051!8.88e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.59e-15,9;CL:0002251,1.59e-15,9;CL:0000988,2.33e-12,32;CL:0002032,2.33e-12,32;CL:0000037,2.33e-12,32;CL:0000837,2.33e-12,32;CL:0000066,1.77e-11,25;CL:0000239,7.85e-11,6;CL:0000677,7.85e-11,6;CL:0000584,7.85e-11,6;CL:0002320,1.10e-09,46;CL:0000134,1.10e-09,46;CL:0000223,3.49e-09,20;CL:0000075,3.82e-09,7;CL:0000791,5.28e-09,9;CL:0000789,5.28e-09,9;CL:0002420,5.28e-09,9;CL:0002419,5.28e-09,9;CL:0000790,5.28e-09,9;CL:0002076,1.79e-08,15;CL:0000838,2.14e-08,12;CL:0000624,9.59e-08,8;CL:0000542,1.26e-07,13;CL:0000051,1.26e-07,13;CL:0000219,1.62e-07,54;CL:0002031,2.39e-07,25;CL:0000084,3.92e-07,11;CL:0000827,3.92e-07,11;CL:0000738,8.68e-07,17;CL:0002087,8.68e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,2.60e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0000344!1.54e-07!15;UBERON:0000490!2.01e-07!66;UBERON:0001242!2.98e-07!13;UBERON:0000060!2.98e-07!13;UBERON:0001262!2.98e-07!13;UBERON:0004786!2.98e-07!13;UBERON:0003350!3.47e-07!9;UBERON:0004808!3.47e-07!9;UBERON:0001277!3.47e-07!9;UBERON:0000485!4.54e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.59e-15,9;UBERON:0004808,1.59e-15,9;UBERON:0001277,1.59e-15,9;UBERON:0000485,2.60e-12,11;UBERON:0001242,2.87e-12,13;UBERON:0001262,2.87e-12,13;UBERON:0004786,2.87e-12,13;UBERON:0000490,1.89e-10,66;UBERON:0000344,2.60e-10,15;UBERON:0003929,6.90e-10,55;UBERON:0002384,1.10e-09,46;UBERON:0005911,1.71e-07,69 | |||
|phase1_expression=0.320297694209588,5.23463111459042,2.72999543633722,18.7527811010235,17.5313505481222,2.68606835059024,2.33612640595526,3.87369970324729,3.51971805379167,4.91535505276186,0.856089841127525,0.319088635981346,4.45121897821135,5.33264454755884,0,0,0.699561878128147,0.315462165358238,0.822686601634433,0.42438965179803,0.595303031057488,0.695036658406197,0.783599367416806,0.47997726838022,0.45881856213434,6.31655160526522,3.87685796543167,2.37018355954478,1.52018735565099,0.252030129759931,0.221730510655305,1.27006134691926,1.23012957516914,15.8481681015439,8.66554859253824,2.49351968037739,8.5751129630195,10.8818223991596,4.6880120671428,6.80580867165938,17.0587131528994,9.56263678941824,7.76816564849846,0.251793635951155,0.304130793658544,0.734187008646726,0,0,0,0,0,0,3.52343472721246,2.90144856804538,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0.299600110518405,0,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0,0,0,0,0.227178579999552,0.0755715601067855,12.1743085254705,0,15.6393406752783,0,0,0.448026887097336,0.280888840263504,0.170430322578058,0.259786004602869,0,0.422530259330042,0,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,0.258937883647172,0,0.346970653532272,0.304465478312141,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0,0,1.07833612055328,1.79970819298022,1.52484272487678,0.299581278809645,0,0,0,0,0,0.324482526135515,0,0.248813941220186,0.758168275301024,0.420883711772948,0,0,0,0,0.204109497453984,0,0.374806898238915,0.258703370739016,0.215567992932842,0,0,0,0,0,0.411564272815887,0,1.40442637462647,2.05878325691772,1.70498099637356,0.207125772535502,0.234526059981096,0.540186184383045,0,0.196764231747404,0,0,0.268273401399619,0.116765342367169,0,0,0.324275238183423,0,0.219550115291051,0.134206418760372,0.210289948564127,0,0.660837565967596,0,0.213288250535234,0,0,0.201683524623343,0,0.380451252225118,0.474529061544512,1.15289268306808,0.754005626400808,0,0,0,0.216138049874694,0.398282546508734,0.189667900953082,0.342745537829186,0,0.203651327845314,0.387904974335251,0.210407459670956,0.189709611372772,0.295220295959204,0.627994911365499,0.246794327843601,1.1858105083486,0.166845105716094,0,0.224862112384854,0,0,0,0,0.162135226775035,0.823684239564244,0,0,0.624075346229121,0.757736633841335,0,0.964887042726734,0.739012760666419,0,0.162964976442026,0,0,0,0.476087281772027,0,0.315270288212382,0.221464689648775,0.159454768657487,1.14704320301017,0.172684981865896,0.144649058581512,1.50791283939272,0,0.491764273019036,0.275936746304732,0.321101179975584,0.117211686592203,0,0.252470927204373,0,0.780877488593277,0.430846795465598,0.238968797952552,0,0,0.809621403349789,0.292255857911312,0.790575555893047,0.321321316421807,0.141940085208269,0.178065603667255,0,0,2.65490276679926,0.242780636154981,0.604647113929502,0.377210159511796,0.295301892880773,0,0,1.09060118843252,0.356497378384721,0.632073515871632,0,0,0,0,0.129358683782755,0.643011105094777,0.354680467284547,0,0.164549020602121,0.608929898229199,0.469343416127421,0.847328283455281,0,1.31909002353184,0,0.0603129249281559,0.238744688006273,0.164140899745061,0,0,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0.457556346413045,0.679913719975421,1.25956307091292,0.552799895217695,0,0.316335993581135,0,0.216010681643603,0,0.655087691238533,0.134864346384821,0.0826534557253359,0,0.129614973291793,0.621339313086926,1.69107881605257,0.149516546043979,0.330916980914195,0.388902376688095,0.387479470433193,1.01373675294467,0.821500670520278,0.781226309063701,0.524296722128554,1.20792060413003,1.72818003754719,2.8441000856536,0.405450430580328,0.410843828659309,0.389762468933385,1.25318686967237,1.98681354781265,0.360586348559907,0.886137163047463,1.51449674922221,0.533447646584999,0.705783295957884,0.38983152295901,1.05833025804362,2.68816875017609,0,0,0.179427713218951,0,0,0,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0,0.412070114477788,0,0,0.25347929989024,0.377252682772152,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.25384382367503,0,0,0,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0.578719832943424,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | |phase1_expression=0.320297694209588,5.23463111459042,2.72999543633722,18.7527811010235,17.5313505481222,2.68606835059024,2.33612640595526,3.87369970324729,3.51971805379167,4.91535505276186,0.856089841127525,0.319088635981346,4.45121897821135,5.33264454755884,0,0,0.699561878128147,0.315462165358238,0.822686601634433,0.42438965179803,0.595303031057488,0.695036658406197,0.783599367416806,0.47997726838022,0.45881856213434,6.31655160526522,3.87685796543167,2.37018355954478,1.52018735565099,0.252030129759931,0.221730510655305,1.27006134691926,1.23012957516914,15.8481681015439,8.66554859253824,2.49351968037739,8.5751129630195,10.8818223991596,4.6880120671428,6.80580867165938,17.0587131528994,9.56263678941824,7.76816564849846,0.251793635951155,0.304130793658544,0.734187008646726,0,0,0,0,0,0,3.52343472721246,2.90144856804538,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0.299600110518405,0,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0,0,0,0,0.227178579999552,0.0755715601067855,12.1743085254705,0,15.6393406752783,0,0,0.448026887097336,0.280888840263504,0.170430322578058,0.259786004602869,0,0.422530259330042,0,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,0.258937883647172,0,0.346970653532272,0.304465478312141,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0.292780797011547,0,0,1.07833612055328,1.79970819298022,1.52484272487678,0.299581278809645,0,0,0,0,0,0.324482526135515,0,0.248813941220186,0.758168275301024,0.420883711772948,0,0,0,0,0.204109497453984,0,0.374806898238915,0.258703370739016,0.215567992932842,0,0,0,0,0,0.411564272815887,0,1.40442637462647,2.05878325691772,1.70498099637356,0.207125772535502,0.234526059981096,0.540186184383045,0,0.196764231747404,0,0,0.268273401399619,0.116765342367169,0,0,0.324275238183423,0,0.219550115291051,0.134206418760372,0.210289948564127,0,0.660837565967596,0,0.213288250535234,0,0,0.201683524623343,0,0.380451252225118,0.474529061544512,1.15289268306808,0.754005626400808,0,0,0,0.216138049874694,0.398282546508734,0.189667900953082,0.342745537829186,0,0.203651327845314,0.387904974335251,0.210407459670956,0.189709611372772,0.295220295959204,0.627994911365499,0.246794327843601,1.1858105083486,0.166845105716094,0,0.224862112384854,0,0,0,0,0.162135226775035,0.823684239564244,0,0,0.624075346229121,0.757736633841335,0,0.964887042726734,0.739012760666419,0,0.162964976442026,0,0,0,0.476087281772027,0,0.315270288212382,0.221464689648775,0.159454768657487,1.14704320301017,0.172684981865896,0.144649058581512,1.50791283939272,0,0.491764273019036,0.275936746304732,0.321101179975584,0.117211686592203,0,0.252470927204373,0,0.780877488593277,0.430846795465598,0.238968797952552,0,0,0.809621403349789,0.292255857911312,0.790575555893047,0.321321316421807,0.141940085208269,0.178065603667255,0,0,2.65490276679926,0.242780636154981,0.604647113929502,0.377210159511796,0.295301892880773,0,0,1.09060118843252,0.356497378384721,0.632073515871632,0,0,0,0,0.129358683782755,0.643011105094777,0.354680467284547,0,0.164549020602121,0.608929898229199,0.469343416127421,0.847328283455281,0,1.31909002353184,0,0.0603129249281559,0.238744688006273,0.164140899745061,0,0,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0.457556346413045,0.679913719975421,1.25956307091292,0.552799895217695,0,0.316335993581135,0,0.216010681643603,0,0.655087691238533,0.134864346384821,0.0826534557253359,0,0.129614973291793,0.621339313086926,1.69107881605257,0.149516546043979,0.330916980914195,0.388902376688095,0.387479470433193,1.01373675294467,0.821500670520278,0.781226309063701,0.524296722128554,1.20792060413003,1.72818003754719,2.8441000856536,0.405450430580328,0.410843828659309,0.389762468933385,1.25318686967237,1.98681354781265,0.360586348559907,0.886137163047463,1.51449674922221,0.533447646584999,0.705783295957884,0.38983152295901,1.05833025804362,2.68816875017609,0,0,0.179427713218951,0,0,0,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0,0.412070114477788,0,0,0.25347929989024,0.377252682772152,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.25384382367503,0,0,0,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0.578719832943424,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr10:41238883..41238909,- | |||
}} | }} |
Latest revision as of 09:07, 4 August 2015
Short description: | p@chr10:41238883..41238909, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:41238883..41238909, - |
Coexpression cluster: | MCL_coexpression_mm9:480 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.59e-15 | 9 |
epithelial cell of alimentary canal | 1.59e-15 | 9 |
hematopoietic cell | 2.33e-12 | 32 |
hematopoietic oligopotent progenitor cell | 2.33e-12 | 32 |
hematopoietic stem cell | 2.33e-12 | 32 |
hematopoietic multipotent progenitor cell | 2.33e-12 | 32 |
epithelial cell | 1.77e-11 | 25 |
brush border epithelial cell | 7.85e-11 | 6 |
gut absorptive cell | 7.85e-11 | 6 |
enterocyte | 7.85e-11 | 6 |
connective tissue cell | 1.10e-09 | 46 |
mesenchymal cell | 1.10e-09 | 46 |
endodermal cell | 3.49e-09 | 20 |
columnar/cuboidal epithelial cell | 3.82e-09 | 7 |
mature alpha-beta T cell | 5.28e-09 | 9 |
alpha-beta T cell | 5.28e-09 | 9 |
immature T cell | 5.28e-09 | 9 |
mature T cell | 5.28e-09 | 9 |
immature alpha-beta T cell | 5.28e-09 | 9 |
endo-epithelial cell | 1.79e-08 | 15 |
lymphoid lineage restricted progenitor cell | 2.14e-08 | 12 |
CD4-positive, alpha-beta T cell | 9.59e-08 | 8 |
lymphocyte | 1.26e-07 | 13 |
common lymphoid progenitor | 1.26e-07 | 13 |
motile cell | 1.62e-07 | 54 |
hematopoietic lineage restricted progenitor cell | 2.39e-07 | 25 |
T cell | 3.92e-07 | 11 |
pro-T cell | 3.92e-07 | 11 |
leukocyte | 8.68e-07 | 17 |
nongranular leukocyte | 8.68e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.59e-15 | 9 |
gastrointestinal system epithelium | 1.59e-15 | 9 |
intestinal epithelium | 1.59e-15 | 9 |
simple columnar epithelium | 2.60e-12 | 11 |
intestinal mucosa | 2.87e-12 | 13 |
wall of intestine | 2.87e-12 | 13 |
gastrointestinal system mucosa | 2.87e-12 | 13 |
unilaminar epithelium | 1.89e-10 | 66 |
mucosa | 2.60e-10 | 15 |
gut epithelium | 6.90e-10 | 55 |
connective tissue | 1.10e-09 | 46 |
endo-epithelium | 1.71e-07 | 69 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 2.60e-10 | 6 |