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FFCP PHASE1:Mm9::chr11:59661542..59661604,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr11:59661542..59661604,+
|DHSsupport=NA
|short_description=p1@Nt5m
|DPIdataset=NA
|description=CAGE_peak_1_at_Nt5m_5end
|association_with_transcript=0bp_to_ENSMUST00000102695,NM_134029,uc007jfd.1_5end
|EntrezGene=103850
|EntrezGene=103850
|HGNC=
|HGNC=
|MCL_coexpression_id=347
|TSSclassifier=NA
|UniProt=Q8VCE6
|UniProt=Q8VCE6
|association_with_transcript=0bp_to_ENSMUST00000102695,NM_134029,uc007jfd.1_5end
|cluster_id=chr11:59661542..59661604,+
|description=CAGE_peak_1_at_Nt5m_5end
|id=chr11:59661542..59661604,+
|ontology_enrichment_celltype=CL:0000117!1.94e-11!23;CL:0000337!1.94e-11!23;CL:0000221!1.33e-10!44;CL:0000133!1.33e-10!44;CL:0002319!3.20e-10!43;CL:0000055!1.88e-08!50;CL:0000540!1.19e-07!33;CL:0000047!1.19e-07!33;CL:0000031!1.19e-07!33;CL:0000404!1.19e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.94e-11,23;CL:0000337,1.94e-11,23;CL:0000221,1.33e-10,44;CL:0000133,1.33e-10,44;CL:0002319,3.20e-10,43;CL:0000540,1.19e-07,33;CL:0000047,1.19e-07,33;CL:0000031,1.19e-07,33;CL:0000404,1.19e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.06e-25!73;UBERON:0005743!1.06e-25!73;UBERON:0000073!1.44e-24!75;UBERON:0001016!1.44e-24!75;UBERON:0001049!1.16e-23!52;UBERON:0005068!1.16e-23!52;UBERON:0006241!1.16e-23!52;UBERON:0007135!1.16e-23!52;UBERON:0002346!2.57e-23!71;UBERON:0003075!2.57e-23!71;UBERON:0007284!2.57e-23!71;UBERON:0004121!5.71e-23!102;UBERON:0000924!5.71e-23!102;UBERON:0006601!5.71e-23!102;UBERON:0000955!1.88e-22!50;UBERON:0006238!1.88e-22!50;UBERON:0000033!4.43e-22!63;UBERON:0002616!4.90e-22!49;UBERON:0002020!3.33e-17!34;UBERON:0003080!3.66e-16!40;UBERON:0003056!6.44e-16!49;UBERON:0002780!1.49e-15!39;UBERON:0001890!1.49e-15!39;UBERON:0006240!1.49e-15!39;UBERON:0002791!3.84e-14!29;UBERON:0003528!3.84e-14!29;UBERON:0001893!3.84e-14!29;UBERON:0007811!3.25e-12!86;UBERON:0000153!2.02e-10!94;UBERON:0000025!2.77e-10!114;UBERON:0004111!4.00e-10!122;UBERON:0000956!6.68e-10!21;UBERON:0001869!6.68e-10!21;UBERON:0000203!6.68e-10!21;UBERON:0002619!6.20e-09!17;UBERON:0003076!2.80e-08!12;UBERON:0003057!2.80e-08!12;UBERON:0000468!5.41e-08!333;UBERON:0000479!1.40e-07!349;UBERON:0002021!2.48e-07!10;UBERON:0000411!2.48e-07!10;UBERON:0001950!2.48e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.35e-26,92;UBERON:0001017,1.06e-25,73;UBERON:0000073,2.41e-25,54;UBERON:0001016,1.44e-24,75;UBERON:0001049,1.15e-23,52;UBERON:0005068,1.15e-23,52;UBERON:0006241,1.15e-23,52;UBERON:0007135,1.15e-23,52;UBERON:0002346,2.54e-21,64;UBERON:0003075,2.54e-21,64;UBERON:0007284,2.54e-21,64;UBERON:0004121,9.52e-21,95;UBERON:0000924,9.52e-21,95;UBERON:0006601,9.52e-21,95;UBERON:0000955,2.80e-20,47;UBERON:0006238,2.80e-20,47;UBERON:0002616,7.15e-20,46;UBERON:0010371,9.69e-18,73;UBERON:0002020,3.33e-17,34;UBERON:0003080,3.65e-16,40;UBERON:0003056,6.43e-16,49;UBERON:0002780,1.48e-15,39;UBERON:0001890,1.48e-15,39;UBERON:0006240,1.48e-15,39;UBERON:0003528,3.84e-14,29;UBERON:0002791,3.84e-14,29;UBERON:0001893,3.84e-14,29;UBERON:0000025,2.76e-10,114;UBERON:0004111,4.00e-10,122;UBERON:0000956,6.68e-10,21;UBERON:0001869,6.68e-10,21;UBERON:0000203,6.68e-10,21;UBERON:0002619,6.19e-09,17;UBERON:0003076,2.80e-08,12;UBERON:0003057,2.80e-08,12;UBERON:0000479,1.29e-07,349;UBERON:0002021,2.48e-07,10;UBERON:0000411,2.48e-07,10;UBERON:0001950,2.48e-07,10
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7,4.59994251231831,3.49380101993884,4.04593039154462,4.21532624199213,3.40282724579238,3.88844919875379,2.4853572523477,5.6369293868419,4.33597983527538,5.12921320417003,5.83353565032143,6.32883135040882,5.4065960157049,5.16371850041317,4.81756223922615,1.8874681996628,5.07326653734613,4.03242008761012,4.4241556887945,5.6763060281246,5.75181360123033,4.54722880422283,3.75956060901711,2.58285761215644,3.12508168751919,3.10148007066612,2.52416124870369,4.03896075271499,3.02478555410522,3.21611006441183,3.17499077413087,4.55819918508119,7.02864189207155,0.665957860122194,1.34570784914214,0.839423081820392,3.67060228661162,2.62755465631655,5.12824547948342,2.35805216986972,4.51414893631827,22.0253218620656,14.7304075682297,19.4784474569395,16.6697586873377,17.1270629942661,17.3740596399631,17.550585006027,12.158672487054,13.5942722695261,14.497288729051,3.1136204275253,4.78829848081237,4.43907374960749,4.86213434136588,3.5634237646757,4.22840069435032,7.3341420174533,6.38708677440572,5.77654577265267,5.05394423527595,5.32306529769503,5.47016390019621,6.9294715527713,6.33849008808206,6.03072424033939,6.66811167796303,6.48952225291191,5.98018583437486,7.00546031365621,5.88795680537589,5.82877729055206,7.63145966485151,5.48403236878838,4.36039249896986,5.92889096616583,6.68455402344244,6.40247905054704,6.57674278594607,4.6173398707593,7.2948495315506,7.3553711236988,6.59980031916275,4.50154147486658,5.73266312388074,5.20847849649082,4.99621155875892,4.21076895201735,3.65280791882107,6.69509162240952,6.83833399270498,6.26043156175138
|phase1_expression=6.72625157840135,3.14077866875425,1.81999695755814,9.37639055051173,8.5152274090879,2.68606835059024,5.84031601488814,2.96983643915625,0.563154888606667,0.936258105287974,2.56826952338257,2.55270908785077,4.62241970814255,5.24522414513984,4.99664642723494,2.22722794128809,1.39912375625629,3.94327706697797,3.01651753932625,5.09267582157636,5.44277056966847,3.97163804803541,6.26879493933445,1.91990907352088,2.2940928106717,3.44539178469012,2.15380998079537,2.37018355954478,2.66032787238923,4.78857246543868,3.10422714917427,5.08024538767705,1.84519436275371,0,4.62162591602039,3.65716219788683,5.10423390655923,0.418531630736908,0.7813353445238,0.523523743973798,0,2.73218193983378,0.971020706062307,3.14742044938943,4.46058497365864,5.13930906052708,15.6478268869608,15.6978112593922,8.12838876117546,11.0825042472342,7.27929392451885,14.3752564364972,2.68452169692378,3.62681071005672,4.03312558970957,2.82985379639542,3.15186783932632,4.64104883049698,13.3528864167335,8.99284664762456,13.9442908771359,4.06613438482959,3.55717918444456,8.09909745553259,10.8775299882367,4.2628806896766,14.6804054154018,11.9107674649682,7.25827286159344,6.21027316325777,6.94072372459561,26.5655415495537,17.6694832761291,7.10446635446733,6.42164655822184,5.51531271966013,26.4278114398533,18.386976684267,18.1255709242367,13.3205150607496,12.0763689555181,11.4600941522487,23.7305549151174,18.5711661310454,14.515833538797,15.6153150301044,15.8032565687004,10.2519695203915,3.86203585999239,3.77857800533928,2.02905142091174,7.74381489283248,4.0798280022465,6.47643829965381,1.94932925234301,3.13618820968135,2.80888840263504,2.72688516124892,2.33807404142582,4.94675404314476,9.01397886570755,5.13305909657271,15.2883143823987,0,3.46385665617943,3.29367825117628,2.02209778005913,2.8545969929765,1.8125651855302,7.57054909230606,4.3371331691534,6.69824052286711,10.3776973765226,10.7013074792362,7.52567725668511,7.6656620711102,4.6967043869531,3.47038456607788,4.42305275974937,3.39710384889559,4.41683036920787,3.87900202508178,3.72783522436244,15.2246014446005,15.9179497178226,2.29911349687732,3.35482348616577,2.39961092397363,1.14363204365758,15.7280171375064,12.8100168789215,9.92669381691629,13.7321212951898,16.8772201838018,12.4672826735736,16.2241263067758,4.58277137326423,3.98102305952298,5.05445516867349,3.57751155007006,4.03373373184381,7.58676944630461,5.22180176435513,6.78171680260718,4.96666443804693,8.45550553880009,5.528401749024,8.2785078636485,4.52692785158969,3.78212160335639,3.87092473160687,5.2606975782618,3.89266148915837,3.83077383174383,4.93877127379064,3.98068533636986,0.702213187313235,3.86021860672073,2.55747149456033,4.97101854085205,5.8631514995274,6.66229627405755,6.15536312521547,8.85439042863317,6.01641740260775,6.74348439776183,5.633741429392,5.60473643362414,6.41783414662574,7.22336841948019,9.24184428822755,7.60239934611728,7.90380415047782,8.85762363818454,13.8791366052324,8.23236899034275,2.31293148088659,1.05780226665418,5.75878276445132,5.57368012465052,5.02583099156164,2.21851877085677,4.22518283305254,3.23383564391351,2.84717436926707,4.77626968699632,3.51869292320377,3.78017296878187,3.50935356814416,4.49409704327111,4.97117514711797,4.58024928485045,3.60369011810855,5.48392860526698,4.50830942692322,5.49858585182348,6.98228953803453,4.41855665309007,7.20896523216533,3.83786384746966,5.02395929092399,6.91024117962083,4.15033677922008,1.83529616287703,0.589676985339609,2.24862112384854,2.43432145666204,3.61765739628625,4.32863948028414,3.74004978686054,4.05338066937588,3.84385978463314,2.87536413054709,2.23284568601102,1.87222603868736,4.54641980304801,5.74071723270119,8.20153986317724,3.32555742299888,5.30575952957357,3.7481944581666,3.56464680127895,5.63256595892405,5.69521275302174,4.52282917683426,3.31727201358258,3.4679731703362,3.76489972402917,2.71073106717728,3.76885623846197,3.62638461918381,4.48412081602686,6.03165135757089,3.26343410291226,4.91764273019036,3.03530420935206,15.5734072288158,16.0580010631318,2.45902418065013,8.07906967053994,4.41711507182759,2.73307121007647,3.66219776145758,4.30143836314594,5.12436950389506,5.09537755419898,1.21443210502468,5.84511715822624,4.34816555741176,8.35435422696698,5.10984306749767,7.47875535402472,4.88660878060728,6.10389454998381,9.2921596837974,4.61283208694465,4.53485335447127,6.03536255218874,4.42952839321159,6.45613810682248,7.23599220871019,5.45300594216258,5.70395805415554,3.79244109522979,3.16255825724996,9.28219889233682,9.19186935535228,6.30213829109586,4.91562998374467,6.43011105094777,5.49754724291048,6.95638388648075,4.93647061806363,6.69822888052118,2.3467170806371,2.75381692122966,6.83638033970382,4.28704257647848,3.39075296061402,3.37752379597673,2.626191568069,2.62625439592098,3.20628920292836,13.1651964427462,2.22132145037209,3.30218988741156,3.1483069652851,1.13021074202815,1.0935538217682,2.51655990527175,2.71965487990169,2.23922323717853,2.3493995546752,2.86401185404534,3.16335993581135,4.47302827679067,5.94029374519907,4.59994251231831,3.49380101993884,4.04593039154462,4.21532624199213,3.40282724579238,3.88844919875379,2.4853572523477,5.6369293868419,4.33597983527538,5.12921320417003,5.83353565032143,6.32883135040882,5.4065960157049,5.16371850041317,4.81756223922615,1.8874681996628,5.07326653734613,4.03242008761012,4.4241556887945,5.6763060281246,5.75181360123033,4.54722880422283,3.75956060901711,2.58285761215644,3.12508168751919,3.10148007066612,2.52416124870369,4.03896075271499,3.02478555410522,3.21611006441183,3.17499077413087,4.55819918508119,7.02864189207155,0.665957860122194,1.34570784914214,0.839423081820392,3.67060228661162,2.62755465631655,5.12824547948342,2.35805216986972,4.51414893631827,22.0253218620656,14.7304075682297,19.4784474569395,16.6697586873377,17.1270629942661,17.3740596399631,17.550585006027,12.158672487054,13.5942722695261,14.497288729051,3.1136204275253,4.78829848081237,4.43907374960749,4.86213434136588,3.5634237646757,4.22840069435032,7.3341420174533,6.38708677440572,5.77654577265267,5.05394423527595,5.32306529769503,5.47016390019621,6.9294715527713,6.33849008808206,6.03072424033939,6.66811167796303,6.48952225291191,5.98018583437486,7.00546031365621,5.88795680537589,5.82877729055206,7.63145966485151,5.48403236878838,4.36039249896986,5.92889096616583,6.68455402344244,6.40247905054704,6.57674278594607,4.6173398707593,7.2948495315506,7.3553711236988,6.59980031916275,4.50154147486658,5.73266312388074,5.20847849649082,4.99621155875892,4.21076895201735,3.65280791882107,6.69509162240952,6.83833399270498,6.26043156175138
|short_description=p1@Nt5m
}}
}}

Latest revision as of 19:44, 1 October 2015

Short description:p1@Nt5m
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nt5m_5end
Coexpression cluster:MCL_coexpression_mm9:347
Association with transcript: 0bp_to_ENSMUST00000102695, NM_134029, uc007jfd.1_5end
EntrezGene:Nt5m
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nt5m

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.38
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.84
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.55
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.62
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.25
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.23
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.02
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.09
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.97
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.27
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C14.79
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.46
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.14
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B715.65
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C215.70
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.13
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C313.35
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C713.94
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C78.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C814.68
Mouse Microglia, donor2.CNhs12634.11736-123E811.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.26
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.21
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F126.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.67
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.42
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D326.43
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.39
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.13
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.08
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E423.73
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.52
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.25
Mouse Schwann, donor1.CNhs12507.11728-123D93.86
Mouse Schwann, donor2.CNhs12573.11746-123F93.78
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C86.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.01
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.85
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D77.57
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D66.70
adrenal gland, embryo E17.CNhs11043.1263-45I110.38
adrenal gland, embryo E18.CNhs11026.1262-18F510.70
adrenal gland, neonate N00.CNhs11191.1311-23C17.53
adrenal gland, neonate N25.CNhs11223.1377-27I37.67
amnion, adult pregnant day17.5.CNhs10488.583-22A84.70
aorta, adult.CNhs10498.46-23H13.47
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F53.40
bone (os femoris), neonate N16.CNhs11225.1525-43A64.42
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B215.22
cerebellum, neonate N30.CNhs11135.1395-42I215.92
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.35
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A415.73
corpus striatum, adult.CNhs10487.19-21D812.81
corpus striatum, neonate N00.CNhs11226.630-43F19.93
cortex, adult.CNhs10473.12-14D513.73
cortex, neonate N30.CNhs11107.1392-42F216.88
diencephalon, adult.CNhs10482.20-12F212.47
diencephalon, neonate N30.CNhs11201.1388-42B216.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.58
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.98
epididymis, adult.CNhs10490.58-23B25.05
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C64.03
eyeball, embryo E14.CNhs10521.399-16E27.59
eyeball, embryo E15.CNhs10593.426-16C95.22
eyeball, embryo E17.CNhs11023.1261-18D46.78
eyeball, neonate N00.CNhs11207.633-15C64.97
eyeball, neonate N01.CNhs11140.1532-43E78.46
eyeball, neonate N02.CNhs11205.1551-44G85.53
eyeball, neonate N16.CNhs11188.777-19A28.28
forelimb, embryo E11.CNhs10596.335-25E24.53
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E23.87
forelimb, embryo E14.CNhs10577.413-26A85.26
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B54.94
gonad, embryo E13.CNhs11044.1564-45I63.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E94.97
heart, embryo E12.CNhs11015.353-12F55.86
heart, embryo E13.CNhs11013.376-3I96.66
heart, embryo E14.CNhs10597.403-26D46.16
heart, embryo E15.CNhs11017.431-16C88.85
heart, embryo E16.CNhs11021.457-17C66.02
heart, embryo E17.CNhs11025.479-18E56.74
heart, embryo E18.CNhs11030.1283-20G35.63
heart, neonate N00.CNhs11213.639-21E35.60
heart, neonate N03.CNhs11221.1349-25I26.42
heart, neonate N10.CNhs11118.749-24G17.22
heart, neonate N16.CNhs11209.782-15G19.24
heart, neonate N20.CNhs11127.821-26I67.60
heart, neonate N25.CNhs11196.1351-25D37.90
heart, neonate N30.CNhs11202.1390-42D28.86
hippocampus, adult.CNhs10478.13-16E813.88
hippocampus, neonate N00.CNhs11228.627-43G18.23
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I55.76
intestine, embryo E13.CNhs11010.381-16D55.57
intestine, embryo E15.CNhs10602.976-16D85.03
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E94.78
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E34.97
intestine, neonate N30.CNhs11131.1384-42G14.58
kidney, embryo E14.CNhs10606.411-4I93.60
kidney, embryo E15.CNhs10997.434-16F85.48
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I25.50
kidney, embryo E18.CNhs11001.1288-20C76.98
kidney, neonate N00.CNhs11214.646-21G74.42
kidney, neonate N10.CNhs11206.758-6D57.21
kidney, neonate N20.CNhs11113.832-19I13.84
kidney, neonate N25.CNhs11122.1353-25F35.02
kidney, neonate N30.CNhs11203.1385-42H16.91
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D72.43
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F44.05
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A34.55
liver, neonate N25.CNhs11198.1368-26H15.74
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B13.33
lung, embryo E12.CNhs10522.354-16G25.31
lung, embryo E14.CNhs10604.404-26F83.75
lung, embryo E15.CNhs11020.432-17C53.56
lung, embryo E16.CNhs10998.458-17B65.63
lung, embryo E17.CNhs10605.480-44A65.70
lung, embryo E18.CNhs10583.1287-20I64.52
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E53.47
lung, neonate N07.CNhs11111.715-19A33.76
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A43.77
lung, neonate N25.CNhs11119.1359-25C73.63
lung, neonate N30.CNhs11133.1394-42H24.48
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C215.57
medulla oblongata, neonate N30.CNhs11200.1396-42A316.06
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.08
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.66
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.85
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I98.35
ovary, adult.CNhs10507.91-2I75.11
ovary, embryo E18.CNhs11040.505-44H77.48
ovary, neonate N00.CNhs11217.1299-22I44.89
oviduct, adult pregnant day01.CNhs10500.988-6G66.10
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F44.61
pancreas, embryo E15.CNhs11042.1556-45F24.53
pancreas, embryo E16.CNhs11003.460-26E56.04
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I76.46
pancreas, neonate N00.CNhs11105.645-26G97.24
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D85.70
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G89.19
pituitary gland, embryo E12.CNhs11018.346-16E66.30
pituitary gland, embryo E13.CNhs11009.370-44C74.92
pituitary gland, embryo E14.CNhs11037.398-44A56.43
pituitary gland, embryo E15.CNhs10592.427-16B95.50
pituitary gland, embryo E16.CNhs11036.449-43F66.96
pituitary gland, embryo E17.CNhs11039.1265-44F54.94
pituitary gland, neonate N00.CNhs11190.1308-22E96.70
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F86.84
skin, adult.CNhs10492.30-1C34.29
skin, neonate N00.CNhs11124.650-25G43.39
skin, neonate N03.CNhs11215.662-22H33.38
skin, neonate N06.CNhs11097.693-20I52.63
skin, neonate N10.CNhs11108.762-6C42.63
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C913.17
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C13.30
spleen, embryo E18.CNhs11011.1271-21F23.15
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.35
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G84.47
stomach, embryo E16.CNhs11022.459-17D45.94
stomach, embryo E17.CNhs11006.1035-18D54.60
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B84.05
stomach, neonate N07.CNhs11210.718-18A94.22
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I13.89
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F54.34
testis, embryo E15.CNhs11034.443-27C55.13
testis, embryo E16.CNhs11033.470-26G55.83
testis, embryo E17.CNhs11029.486-18I56.33
testis, embryo E18.CNhs11027.503-18G55.41
testis, neonate N00.CNhs11189.1300-22B75.16
testis, neonate N07.CNhs11222.726-26I44.82
testis, neonate N10.CNhs11204.763-44D91.89
testis, neonate N20.CNhs11110.839-18H35.07
testis, neonate N30.CNhs11130.1391-42E24.03
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I45.68
thymus, embryo E15.CNhs11005.430-45I25.75
thymus, embryo E16.CNhs11002.456-26C54.55
thymus, embryo E17.CNhs10581.478-18C13.76
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F83.13
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C42.52
thymus, neonate N07.CNhs11211.713-19D34.04
thymus, neonate N10.CNhs11194.748-24E43.02
thymus, neonate N20.CNhs11186.820-7A23.22
thymus, neonate N25.CNhs11125.1362-25G73.17
thymus, neonate N30.CNhs11132.1393-42G24.56
tongue, adult.CNhs10499.32-1B47.03
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E43.67
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E55.13
vagina, adult.CNhs10502.89-27D52.36
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.03
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.73
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A319.48
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A617.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.59
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A914.50
whole body, embryo E11.CNhs11014.324-5I83.11
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H24.44
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.49
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.36
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.93
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.62
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.73
whole body, embryo E17.5.CNhs10513.490-9F95.21
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C66.70
whole body, neonate N06.CNhs10515.692-21D16.84
whole body, neonate N10.CNhs10518.761-6B46.26





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.94e-1123
neuroblast (sensu Vertebrata)1.94e-1123
ectodermal cell1.33e-1044
neurectodermal cell1.33e-1044
neural cell3.20e-1043
neuron1.19e-0733
neuronal stem cell1.19e-0733
neuroblast1.19e-0733
electrically signaling cell1.19e-0733

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest2.35e-2692
central nervous system1.06e-2573
regional part of nervous system2.41e-2554
nervous system1.44e-2475
neural tube1.15e-2352
neural rod1.15e-2352
future spinal cord1.15e-2352
neural keel1.15e-2352
neurectoderm2.54e-2164
neural plate2.54e-2164
presumptive neural plate2.54e-2164
ectoderm-derived structure9.52e-2195
ectoderm9.52e-2195
presumptive ectoderm9.52e-2195
brain2.80e-2047
future brain2.80e-2047
regional part of brain7.15e-2046
ecto-epithelium9.69e-1873
gray matter3.33e-1734
anterior neural tube3.65e-1640
pre-chordal neural plate6.43e-1649
regional part of forebrain1.48e-1539
forebrain1.48e-1539
future forebrain1.48e-1539
brain grey matter3.84e-1429
regional part of telencephalon3.84e-1429
telencephalon3.84e-1429
tube2.76e-10114
anatomical conduit4.00e-10122
cerebral cortex6.68e-1021
cerebral hemisphere6.68e-1021
pallium6.68e-1021
regional part of cerebral cortex6.19e-0917
posterior neural tube2.80e-0812
chordal neural plate2.80e-0812
tissue1.29e-07349
occipital lobe2.48e-0710
visual cortex2.48e-0710
neocortex2.48e-0710
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